Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16006 Trifolium pratense HOM05D008176 ORTHO05D004477 5.7e-83 310.8 154 100.0
Medtr3g086830 Medicago truncatula HOM05D008176 ORTHO05D004477 1.5e-70 269.6 156 86.5
Ca_16509_v3 Cicer arietinum L. HOM05D008176 ORTHO05D004477 3.6e-53 211.8 156 71.8
Psat5g090880 Pisum sativum HOM05D008176 ORTHO05D004477 1.7e-50 203.0 158 70.3
Glyma.11G242100 Glycine max HOM05D008176 ORTHO05D004477 1.7e-31 139.8 147 62.6
Lalb_Chr11g0075471 Lupinus albus HOM05D008176 ORTHO05D004477 1.7e-31 139.8 160 52.5
VMungo1383G1959 Vigna mungo HOM05D008176 ORTHO05D004477 2.3e-31 139.4 153 53.6
Phvul.001G253900 Phaseolus vulgaris HOM05D008176 ORTHO05D004477 1.5e-30 136.7 155 54.2
Glyma.18G015000 Glycine max HOM05D008176 ORTHO05D004477 9.6e-30 134.0 146 61.0
Ca_08988_v3 Cicer arietinum L. HOM05D008176 ORTHO05D004477 2.7e-24 115.9 152 46.1
Psat7g056440 Pisum sativum HOM05D008176 ORTHO05D004477 2.5e-22 109.4 155 44.5
Medtr8g089920 Medicago truncatula HOM05D008176 ORTHO05D004477 9.6e-22 107.5 152 45.4
TPR.G6203 Trifolium pratense HOM05D008176 ORTHO05D004477 2.4e-20 102.8 151 41.7
Glyma.05G175800 Glycine max HOM05D008176 ORTHO05D004477 3.1e-20 102.4 146 45.2
Glyma.08G133100 Glycine max HOM05D008176 ORTHO05D004477 2.6e-19 99.4 148 44.6
Phvul.002G260800 Phaseolus vulgaris HOM05D008176 ORTHO05D004477 1.3e-18 97.1 146 42.5
Lj4g0008028 Lotus japonicus HOM05D008176 ORTHO05D004477 2.9e-18 95.9 148 42.6
Lalb_Chr12g0203981 Lupinus albus HOM05D008176 ORTHO05D004477 7.1e-17 91.3 153 41.8
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.7e-15 86.7 143 43.4
QL06p048130 Quercus lobata HOM05D008176 ORTHO05D004477 1.1e-14 84.0 149 39.6
VMungo0251G0397 Vigna mungo HOM05D008176 ORTHO05D004477 9.6e-14 80.9 149 41.6
CiPaw.03G145800 Carya illinoinensis HOM05D008176 ORTHO05D004477 1.3e-13 80.5 145 38.6
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 2.1e-13 79.7 151 37.7
Potri.005G072000 Populus trichocarpa HOM05D008176 ORTHO05D004477 9.0e-12 74.3 129 38.0
CiPaw.04G103600 Carya illinoinensis HOM05D008176 ORTHO05D004477 2.0e-11 73.2 138 39.9
Gohir.A11G051100 Gossypium hirsutum HOM05D008176 ORTHO05D004477 9.9e-11 70.9 141 38.3
Gorai.007G059700 Gossypium raimondii HOM05D008176 ORTHO05D004477 1.7e-10 70.1 141 38.3
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.9e-10 69.3 140 35.7
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.9e-10 69.3 144 37.5
Manes.12G129900 Manihot esculenta HOM05D008176 ORTHO05D004477 2.9e-10 69.3 141 37.6
FAN26G3011 Fragaria x ananassa HOM05D013332 ORTHO05D004477 3.8e-10 68.9 176 34.7
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 3.8e-10 68.9 142 39.4
TWI53G0271 Tripterygium wilfordii HOM05D008176 ORTHO05D004477 4.9e-10 68.6 151 36.4
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 6.4e-10 68.2 146 37.0
FAN28G1274 Fragaria x ananassa HOM05D013332 ORTHO05D004477 8.4e-10 67.8 175 34.9
RcHm_v2.0_Chr2g0112381 Rosa chinensis HOM05D013332 ORTHO05D004477 2.4e-09 66.2 182 33.0
FAN19G2695 Fragaria x ananassa HOM05D013332 ORTHO05D004477 3.2e-09 65.9 177 34.5
FAN23G0907 Fragaria x ananassa HOM05D013332 ORTHO05D004477 4.2e-09 65.5 175 33.7
Nitab4.5_0000128g0240 Nicotiana tabacum HOM05D008176 ORTHO05D004477 4.2e-09 65.5 145 35.9
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 5.5e-09 65.1 145 35.9
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 7.1e-09 64.7 157 36.3
Ciclev10026640m.g Citrus clementina HOM05D008176 ORTHO05D004477 9.3e-09 64.3 148 35.1
Duzib187G0825 Durio zibethinus HOM05D008176 ORTHO05D004477 1.2e-08 63.9 136 35.3
Nitab4.5_0012818g0010 Nicotiana tabacum HOM05D008176 ORTHO05D004477 1.2e-08 63.9 138 36.2
Gohir.A02G129700 Gossypium hirsutum HOM05D008176 ORTHO05D004477 1.6e-08 63.5 140 32.1
Thecc.01G095600 Theobroma cacao HOM05D008176 ORTHO05D004477 2.1e-08 63.2 132 35.6
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 3.5e-08 62.4 143 35.7
COL.COLO4_27295 Corchorus olitorius HOM05D008176 ORTHO05D004477 4.6e-08 62.0 138 37.0
SGA_v2.0_scaffold108G30894 Striga asiatica HOM05D008176 ORTHO05D004477 6.0e-08 61.6 149 38.3
Gohir.D11G054500 Gossypium hirsutum HOM05D008176 ORTHO05D004477 7.9e-08 61.2 145 35.2
Gorai.003G041400 Gossypium raimondii HOM05D008176 ORTHO05D004477 7.9e-08 61.2 140 31.4
Gohir.D03G040500 Gossypium hirsutum HOM05D008176 ORTHO05D004477 1.0e-07 60.8 140 30.7
Hma1.2p1_0019F.1_g013800 Hydrangea macrophylla HOM05D013332 ORTHO05D004477 1.0e-07 60.8 173 30.6
Sabra07G0080300 Salix brachista HOM05D008176 ORTHO05D004477 1.0e-07 60.8 130 36.2
Dinv13234 Davidia involucrata HOM05D008176 ORTHO05D004477 1.3e-07 60.5 134 34.3
Atru.chr3.1344 Acer truncatum HOM05D008176 ORTHO05D004477 1.8e-07 60.1 140 35.7
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.8e-07 60.1 141 34.8
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 2.3e-07 59.7 140 32.9
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 2.3e-07 59.7 143 34.3
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 3.0e-07 59.3 141 34.8
Haze_24851 Corylus avellana HOM05D008176 ORTHO05D004477 3.0e-07 59.3 143 31.5
Cc10_g06700 Coffea canephora HOM05D008046 ORTHO05D004477 5.1e-07 58.5 146 30.8
TWI74G1149 Tripterygium wilfordii HOM05D008176 ORTHO05D004477 5.1e-07 58.5 153 35.3
Cpa.g.sc55.74 Carica papaya HOM05D008176 ORTHO05D004477 6.7e-07 58.2 146 32.9
FvH4_1g20240 Fragaria vesca HOM05D013332 ORTHO05D004477 8.7e-07 57.8 176 31.2
Duzib264G0386 Durio zibethinus HOM05D008176 ORTHO05D004477 1.1e-06 57.4 134 33.6
Hma1.2p1_1148F.1_g261600 Hydrangea macrophylla HOM05D008046 ORTHO05D004477 1.1e-06 57.4 144 30.6
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 1.1e-06 57.4 142 33.1
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 1.9e-06 56.6 147 32.0
Potri.007G097000 Populus trichocarpa HOM05D008176 ORTHO05D004477 3.3e-06 55.8 136 34.6
Gohir.D11G218800 Gossypium hirsutum HOM05D008176 ORTHO05D004477 4.3e-06 55.5 154 31.8
Aqoxy6G00716 Aquilegia oxysepala HOM05D008046 ORTHO05D004477 5.6e-06 55.1 151 29.1
Haze_18268 Corylus avellana HOM05D008046 ORTHO05D004477 7.4e-06 54.7 147 34.7
Haze_18269 Corylus avellana HOM05D008046 ORTHO05D004477 7.4e-06 54.7 147 34.7
Manes.13G096700 Manihot esculenta HOM05D008176 ORTHO05D004477 7.4e-06 54.7 140 35.7
Oeu048965.1 Olea europaea HOM05D008046 ORTHO05D004477 9.6e-06 54.3 138 34.1


User provided reference genes

Program Settings