Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G15918 Trifolium pratense HOM05D000018 ORTHO05D000453 1.7e-45 185.7 92 100.0
TPR.G23397 Trifolium pratense HOM05D000018 ORTHO05D000453 3.1e-28 128.3 65 93.8
TPR.G32520 Trifolium pratense HOM05D000018 ORTHO05D000453 1.7e-26 122.5 65 89.2
TPR.G27111 Trifolium pratense HOM05D000018 ORTHO05D000453 7.2e-25 117.1 65 87.7
TPR.G36053 Trifolium pratense HOM05D000018 ORTHO05D000453 3.7e-21 104.8 57 86.0
Ca_06836_v3 Cicer arietinum L. HOM05D000018 ORTHO05D000453 3.1e-20 101.7 65 70.8
Lj1g0016237 Lotus japonicus HOM05D000018 ORTHO05D000453 5.9e-19 97.4 65 67.7
Psat3g203600 Pisum sativum HOM05D000018 ORTHO05D000453 5.9e-19 97.4 65 67.7
arahy.Tifrunner.gnm1.ann1.I8IDBT Arachis hypogaea HOM05D000018 ORTHO05D000453 1.5e-17 92.8 65 67.7
arahy.Tifrunner.gnm1.ann1.7S0877 Arachis hypogaea HOM05D000018 ORTHO05D000453 2.5e-17 92.0 73 61.6
Lj1g0018607 Lotus japonicus HOM05D000018 ORTHO05D000453 2.1e-16 89.0 74 63.5
Glyma.18G273200 Glycine max HOM05D000018 ORTHO05D000453 1.4e-15 86.3 65 64.6
VMungo1383G1295 Vigna mungo HOM05D000018 ORTHO05D000453 4.0e-15 84.7 65 67.7
VMungo1383G3637 Vigna mungo HOM05D000018 ORTHO05D000453 1.5e-14 82.8 61 60.7
Medtr6g015950 Medicago truncatula HOM05D000018 ORTHO05D000453 2.0e-14 82.4 65 60.0
Psat1g065640 Pisum sativum HOM05D000018 ORTHO05D000453 2.6e-14 82.0 65 56.9
Ca_14393_v3 Cicer arietinum L. HOM05D000018 ORTHO05D000453 7.5e-14 80.5 65 58.5
Medtr7g016080 Medicago truncatula HOM05D000018 ORTHO05D000453 2.8e-13 78.6 67 58.2
Glyma.13G052800 Glycine max HOM05D000018 ORTHO05D000453 1.1e-12 76.6 65 55.4
Glyma.19G034000 Glycine max HOM05D000018 ORTHO05D000453 1.4e-12 76.3 65 53.8
Ca_06834_v3 Cicer arietinum L. HOM05D000018 ORTHO05D000453 4.1e-12 74.7 65 55.4
FvH4_2g21690 Fragaria vesca HOM05D000018 ORTHO05D000453 1.2e-11 73.2 61 55.7
FAN15G0335 Fragaria x ananassa HOM05D000018 ORTHO05D000453 1.2e-11 73.2 61 55.7
FAN27G2542 Fragaria x ananassa HOM05D000018 ORTHO05D000453 1.2e-11 73.2 61 55.7
RcHm_v2.0_Chr6g0288371 Rosa chinensis HOM05D000018 ORTHO05D000453 1.6e-11 72.8 61 55.7
Medtr7g016090 Medicago truncatula HOM05D000018 ORTHO05D000453 2.0e-11 72.4 65 52.3
TPR.G15929 Trifolium pratense HOM05D000018 ORTHO05D000453 2.0e-11 72.4 65 49.2
FAN24G0807 Fragaria x ananassa HOM05D000018 ORTHO05D000453 4.5e-11 71.2 61 54.1
TPR.G34420 Trifolium pratense HOM05D000018 ORTHO05D000453 4.5e-11 71.2 65 52.3
TPR.G39075 Trifolium pratense HOM05D000100 ORTHO05D000052 4.5e-11 71.2 65 52.3
arahy.Tifrunner.gnm1.ann1.J0AE6B Arachis hypogaea HOM05D000018 ORTHO05D000453 1.3e-10 69.7 71 50.7
TPR.G23374 Trifolium pratense HOM05D000018 ORTHO05D000453 2.3e-10 68.9 60 51.7
Lj2g0011674 Lotus japonicus HOM05D000018 ORTHO05D000453 3.8e-10 68.2 64 59.4
Phvul.004G041800 Phaseolus vulgaris HOM05D000018 ORTHO05D000453 3.8e-10 68.2 65 55.4
VMungo0464G0959 Vigna mungo HOM05D000018 ORTHO05D000453 1.1e-09 66.6 65 49.2
CiPaw.04G186000 Carya illinoinensis HOM05D000018 ORTHO05D000453 1.5e-09 66.2 66 54.5
Psat3g203640 Pisum sativum HOM05D000018 ORTHO05D000453 1.5e-09 66.2 60 50.0
Lj2g0027597 Lotus japonicus HOM05D000018 ORTHO05D000453 1.9e-09 65.9 64 59.4
Gorai.004G072700 Gossypium raimondii HOM05D000018 ORTHO05D000453 4.3e-09 64.7 63 49.2
CiPaw.03G262800 Carya illinoinensis HOM05D000018 ORTHO05D000453 9.5e-09 63.5 61 52.5
Gohir.A08G059900 Gossypium hirsutum HOM05D000018 ORTHO05D000453 9.5e-09 63.5 63 49.2
Prupe.8G225100 Prunus persica HOM05D000018 ORTHO05D000453 9.5e-09 63.5 61 54.1
Gohir.D08G069100 Gossypium hirsutum HOM05D000018 ORTHO05D000453 1.2e-08 63.2 63 47.6
Lj1g0017286 Lotus japonicus HOM05D000018 ORTHO05D000453 2.1e-08 62.4 64 56.2
Thecc.01G260000 Theobroma cacao HOM05D000018 ORTHO05D000453 2.8e-08 62.0 61 54.1
TPR.G20085 Trifolium pratense HOM05D000018 ORTHO05D000453 2.8e-08 62.0 56 57.1
Lalb_Chr17g0336831 Lupinus albus HOM05D000018 ORTHO05D000453 3.6e-08 61.6 65 41.5
QL09p040576 Quercus lobata HOM05D000018 ORTHO05D000453 3.6e-08 61.6 61 50.8
QL09p040635 Quercus lobata HOM05D000018 ORTHO05D000453 4.7e-08 61.2 61 50.8
QL09p040592 Quercus lobata HOM05D000018 ORTHO05D000453 6.1e-08 60.8 61 49.2
Duzib133G0369 Durio zibethinus HOM05D000018 ORTHO05D000453 1.0e-07 60.1 61 50.8
MD10G1185400 Malus domestica HOM05D000018 ORTHO05D000453 1.0e-07 60.1 62 53.2
Gohir.D08G208200 Gossypium hirsutum HOM05D000018 ORTHO05D000453 1.4e-07 59.7 64 50.0
Gorai.004G220600 Gossypium raimondii HOM05D000018 ORTHO05D000453 1.4e-07 59.7 64 50.0
ClCG09G007690 Citrullus lanatus HOM05D000018 ORTHO05D000453 2.3e-07 58.9 60 51.7
Duzib138G0622 Durio zibethinus HOM05D000018 ORTHO05D000453 3.0e-07 58.5 61 49.2
Gohir.A08G189700 Gossypium hirsutum HOM05D000018 ORTHO05D000453 4.0e-07 58.2 64 48.4
QL09p040786 Quercus lobata HOM05D000018 ORTHO05D000453 4.0e-07 58.2 61 49.2
Duzib133G1473 Durio zibethinus HOM05D000018 ORTHO05D000453 6.8e-07 57.4 63 49.2
QL09p038383 Quercus lobata HOM05D000018 ORTHO05D000453 6.8e-07 57.4 62 51.6
Gohir.A11G130200 Gossypium hirsutum HOM05D000018 ORTHO05D000453 8.9e-07 57.0 61 50.8
Gohir.D11G135900 Gossypium hirsutum HOM05D000018 ORTHO05D000453 8.9e-07 57.0 61 50.8
Gorai.007G145500 Gossypium raimondii HOM05D000018 ORTHO05D000453 8.9e-07 57.0 61 50.8
MBI17_g27253_MAGBIO Magnolia biondii HOM05D000018 ORTHO05D000453 8.9e-07 57.0 61 49.2
TPR.G23407 Trifolium pratense HOM05D000018 ORTHO05D000453 8.9e-07 57.0 64 48.4
TAR362G0966 Trochodendron aralioides HOM05D000018 ORTHO05D000453 8.9e-07 57.0 64 53.1
CsaV3_7G027450 Cucumis sativus L. HOM05D000018 ORTHO05D000453 1.2e-06 56.6 60 53.3
QL09p040661 Quercus lobata HOM05D000018 ORTHO05D000453 1.2e-06 56.6 75 48.0
FvH4_2g11330 Fragaria vesca HOM05D000018 ORTHO05D000453 1.5e-06 56.2 67 46.3
FAN24G1881 Fragaria x ananassa HOM05D000018 ORTHO05D000453 1.5e-06 56.2 67 46.3
Thecc.01G259900 Theobroma cacao HOM05D000018 ORTHO05D000453 1.5e-06 56.2 63 47.6
Lj2A747G14 Lonicera japonica HOM05D000018 ORTHO05D000453 2.0e-06 55.8 65 47.7
Actinidia21198 Actinidia chinensis HOM05D000018 ORTHO05D000453 3.4e-06 55.1 77 42.9
FAN15G0907 Fragaria x ananassa HOM05D000018 ORTHO05D000453 3.4e-06 55.1 67 46.3
Haze_24614 Corylus avellana HOM05D000018 ORTHO05D000453 4.4e-06 54.7 62 48.4
RcHm_v2.0_Chr4g0407601 Rosa chinensis HOM05D000018 ORTHO05D000453 4.4e-06 54.7 67 44.8
Gohir.D08G208100 Gossypium hirsutum HOM05D000018 ORTHO05D000453 5.7e-06 54.3 64 46.9
Gorai.004G220500 Gossypium raimondii HOM05D000018 ORTHO05D000453 5.7e-06 54.3 64 46.9
EL10Ac5g10409 Beta vulgaris HOM05D000018 ORTHO05D000453 9.8e-06 53.5 61 45.9
Gorai.001G252200 Gossypium raimondii HOM05D000018 ORTHO05D000453 9.8e-06 53.5 64 50.0
Lj1A65T51 Lonicera japonica HOM05D000018 ORTHO05D000453 9.8e-06 53.5 65 46.2


User provided reference genes

Program Settings