Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G15824 Trifolium pratense HOM05D001538 ORTHO05D000007 2.6e-52 208.4 101 100.0
TPR.G14439 Trifolium pratense HOM05D000092 ORTHO05D000042 6.1e-33 144.1 92 75.0
TPR.G23606 Trifolium pratense HOM05D001538 ORTHO05D000007 6.7e-32 140.6 91 73.6
TPR.G19027 Trifolium pratense HOM05D001538 ORTHO05D000007 1.6e-30 136.0 92 69.6
TPR.G35977 Trifolium pratense HOM05D001538 ORTHO05D000007 3.4e-28 128.3 87 69.0
TPR.G18365 Trifolium pratense HOM05D001538 ORTHO05D000007 5.5e-26 120.9 81 69.1
Medtr1024s0010 Medicago truncatula HOM05D001538 ORTHO05D000007 1.2e-25 119.8 92 60.9
Medtr6g045237 Medicago truncatula HOM05D001538 ORTHO05D000007 2.7e-25 118.6 92 58.7
Medtr0195s0010 Medicago truncatula HOM05D001538 ORTHO05D000007 3.6e-25 118.2 92 54.3
Medtr0195s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 3.6e-25 118.2 92 54.3
Medtr1g062320 Medicago truncatula HOM05D001538 ORTHO05D000007 3.6e-25 118.2 92 58.7
Medtr4g096760 Medicago truncatula HOM05D001538 ORTHO05D000007 4.6e-25 117.9 92 59.8
Medtr2g064630 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-24 115.5 93 54.8
TPR.G7611 Trifolium pratense HOM05D001538 ORTHO05D000007 4.3e-23 111.3 92 56.5
Medtr7g063160 Medicago truncatula HOM05D001538 ORTHO05D000007 9.7e-23 110.2 90 55.6
TPR.G37617 Trifolium pratense HOM05D001538 ORTHO05D000007 9.7e-23 110.2 89 58.4
Medtr6g022050 Medicago truncatula HOM05D001538 ORTHO05D000007 1.3e-22 109.8 92 55.4
Medtr5g060720 Medicago truncatula HOM05D001538 ORTHO05D000007 1.7e-22 109.4 89 55.1
Medtr0012s0140 Medicago truncatula HOM05D001538 ORTHO05D000007 8.2e-22 107.1 92 50.0
Medtr3g079805 Medicago truncatula HOM05D001538 ORTHO05D000007 8.2e-22 107.1 92 55.4
Medtr7g111460 Medicago truncatula HOM05D001538 ORTHO05D000007 8.2e-22 107.1 92 52.2
Medtr1g032820 Medicago truncatula HOM05D001538 ORTHO05D000007 1.1e-21 106.7 92 52.2
Medtr2g031910 Medicago truncatula HOM05D001538 ORTHO05D000007 1.1e-21 106.7 92 53.3
Medtr8g445450 Medicago truncatula HOM05D001538 ORTHO05D000007 1.1e-21 106.7 92 48.9
Medtr1g007020 Medicago truncatula HOM05D001538 ORTHO05D000007 1.8e-21 105.9 85 56.5
Lalb_Chr13g0290751 Lupinus albus HOM05D000003 ORTHO05D000004 3.1e-21 105.1 92 55.4
Medtr3g464250 Medicago truncatula HOM05D001538 ORTHO05D000007 4.1e-21 104.8 92 53.3
TPR.G32743 Trifolium pratense HOM05D001538 ORTHO05D000007 9.1e-21 103.6 90 56.7
Medtr3g062250 Medicago truncatula HOM05D027863 ORTHO05D000007 2.6e-20 102.1 99 49.5
TPR.G39433 Trifolium pratense HOM05D001538 ORTHO05D000007 3.4e-20 101.7 91 53.8
Medtr2g438650 Medicago truncatula HOM05D001538 ORTHO05D000007 7.7e-20 100.5 92 47.8
Medtr7g063170 Medicago truncatula HOM05D001538 ORTHO05D000007 7.7e-20 100.5 75 60.0
Medtr1g040935 Medicago truncatula HOM05D001538 ORTHO05D000007 1.0e-19 100.1 92 51.1
Medtr6g038330 Medicago truncatula HOM05D041717 ORTHO05D000007 1.0e-19 100.1 92 48.9
Medtr7g445700 Medicago truncatula HOM05D001538 ORTHO05D000007 1.0e-19 100.1 94 46.8
TPR.G27280 Trifolium pratense HOM05D001538 ORTHO05D000007 1.3e-19 99.8 91 52.7
Medtr6g471850 Medicago truncatula HOM05D001538 ORTHO05D000007 3.8e-19 98.2 79 59.5
TPR.G21617 Trifolium pratense HOM05D001538 ORTHO05D000007 5.0e-19 97.8 92 54.3
Medtr7g070750 Medicago truncatula HOM05D001538 ORTHO05D000007 6.5e-19 97.4 85 51.8
Medtr1g041005 Medicago truncatula HOM05D001538 ORTHO05D000007 5.5e-18 94.4 92 47.8
Medtr8g466790 Medicago truncatula HOM05D001538 ORTHO05D000007 5.5e-18 94.4 87 49.4
Medtr5g085370 Medicago truncatula HOM05D001538 ORTHO05D000007 2.7e-17 92.0 77 55.8
Medtr4g108010 Medicago truncatula HOM05D001538 ORTHO05D000007 3.6e-17 91.7 79 53.2
TPR.G33855 Trifolium pratense HOM05D001538 ORTHO05D000007 1.4e-16 89.7 93 47.3
Medtr1g090997 Medicago truncatula HOM05D001538 ORTHO05D000007 1.8e-16 89.4 81 48.1
TPR.G13832 Trifolium pratense HOM05D001538 ORTHO05D000007 3.0e-16 88.6 95 43.2
TPR.G19697 Trifolium pratense HOM05D001538 ORTHO05D004353 3.0e-16 88.6 93 44.1
TPR.G28466 Trifolium pratense HOM05D001538 ORTHO05D000007 3.0e-16 88.6 93 45.2
Medtr1g093780 Medicago truncatula HOM05D001538 ORTHO05D000007 3.9e-16 88.2 81 46.9
TPR.G39675 Trifolium pratense HOM05D001538 ORTHO05D000007 3.9e-16 88.2 95 44.2
TPR.G25770 Trifolium pratense HOM05D001538 ORTHO05D000007 8.8e-16 87.0 93 43.0
TPR.G39566 Trifolium pratense HOM05D001538 ORTHO05D000007 1.1e-15 86.7 95 43.2
Medtr4g046100 Medicago truncatula HOM05D001538 ORTHO05D000007 2.0e-15 85.9 77 53.2
PSO541G3845 Papaver somniferum HOM05D001538 ORTHO05D000007 2.6e-15 85.5 94 42.6
FvH4_4g05601 Fragaria vesca HOM05D001538 ORTHO05D000007 3.3e-15 85.1 99 38.4
TPR.G2656 Trifolium pratense HOM05D001538 ORTHO05D000007 3.3e-15 85.1 95 42.1
Medtr4g045863 Medicago truncatula HOM05D001538 ORTHO05D000007 7.4e-15 84.0 95 40.0
Medtr3g465060 Medicago truncatula HOM05D001538 ORTHO05D000007 9.7e-15 83.6 90 44.4
Medtr4g035630 Medicago truncatula HOM05D001538 ORTHO05D000007 1.7e-14 82.8 87 42.5
PSO675G8250 Papaver somniferum HOM05D001538 ORTHO05D000007 2.2e-14 82.4 94 42.6
Psat7g029600 Pisum sativum HOM05D001538 ORTHO05D000007 2.8e-14 82.0 95 41.1
Medtr5g037520 Medicago truncatula HOM05D001538 ORTHO05D000007 4.8e-14 81.3 92 43.5
Phvul.001G160900 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 6.3e-14 80.9 90 41.1
Phvul.008G032300 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 6.3e-14 80.9 90 41.1
Psat7g061080 Pisum sativum HOM05D000003 ORTHO05D000006 6.3e-14 80.9 93 43.0
TPR.G21276 Trifolium pratense HOM05D001538 ORTHO05D000007 6.3e-14 80.9 92 45.7
RcHm_v2.0_Chr3g0453631 Rosa chinensis HOM05D001538 ORTHO05D000007 8.2e-14 80.5 93 44.1
FvH4_7g19511 Fragaria vesca HOM05D001538 ORTHO05D000007 1.1e-13 80.1 93 44.1
Medtr5g024590 Medicago truncatula HOM05D001538 ORTHO05D000007 1.1e-13 80.1 81 45.7
FvH4_1g13572 Fragaria vesca HOM05D001538 ORTHO05D000007 1.4e-13 79.7 94 39.4
FvH4_4g08213 Fragaria vesca HOM05D001538 ORTHO05D000007 1.4e-13 79.7 105 40.0
TPR.G21298 Trifolium pratense HOM05D001538 ORTHO05D000007 1.4e-13 79.7 93 39.8
FvH4_2g03281 Fragaria vesca HOM05D001538 ORTHO05D000007 3.1e-13 78.6 99 36.4
TPR.G16991 Trifolium pratense HOM05D001538 ORTHO05D000007 3.1e-13 78.6 87 41.4
Lalb_Chr07g0194691 Lupinus albus HOM05D001538 ORTHO05D000007 4.1e-13 78.2 92 39.1
Medtr0488s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 4.1e-13 78.2 95 37.9
FvH4_2g26101 Fragaria vesca HOM05D001538 ORTHO05D000007 1.2e-12 76.6 93 39.8
Medtr5g046930 Medicago truncatula HOM05D001538 ORTHO05D000007 1.2e-12 76.6 95 37.9
Medtr7g023870 Medicago truncatula HOM05D001538 ORTHO05D000007 1.6e-12 76.3 68 52.9
Medtr6g043680 Medicago truncatula HOM05D001538 ORTHO05D000007 2.0e-12 75.9 92 43.5
TPR.G36504 Trifolium pratense HOM05D000250 ORTHO05D000007 2.0e-12 75.9 49 73.5
Lalb_Chr13g0303791 Lupinus albus HOM05D001538 ORTHO05D000007 2.6e-12 75.5 79 45.6
Medtr3g050340 Medicago truncatula HOM05D001538 ORTHO05D000007 2.6e-12 75.5 92 41.3
Medtr7g006745 Medicago truncatula HOM05D001538 ORTHO05D000007 3.5e-12 75.1 84 39.3
Psat3g128360 Pisum sativum HOM05D001538 ORTHO05D000007 3.5e-12 75.1 94 40.4
Lj2A1219T39 Lonicera japonica HOM05D001538 ORTHO05D000007 4.5e-12 74.7 92 38.0
TPR.G15063 Trifolium pratense HOM05D001538 ORTHO05D000007 4.5e-12 74.7 49 67.3
Lj9C305T8 Lonicera japonica HOM05D001538 ORTHO05D000007 7.7e-12 73.9 92 33.7
Lj9C692G13 Lonicera japonica HOM05D001538 ORTHO05D000007 1.0e-11 73.6 92 39.1
Medtr8g104170 Medicago truncatula HOM05D001538 ORTHO05D000007 1.3e-11 73.2 86 38.4
FvH4_3g10372 Fragaria vesca HOM05D001538 ORTHO05D000007 1.7e-11 72.8 93 39.8
Lj4A924T29 Lonicera japonica HOM05D001538 ORTHO05D000007 1.7e-11 72.8 92 37.0
Medtr4g093740 Medicago truncatula HOM05D001538 ORTHO05D000007 1.7e-11 72.8 94 39.4
Medtr6g016995 Medicago truncatula HOM05D001538 ORTHO05D000007 1.7e-11 72.8 66 48.5
Medtr8g067570 Medicago truncatula HOM05D001538 ORTHO05D000007 1.7e-11 72.8 84 42.9
TPR.G38827 Trifolium pratense HOM05D001538 ORTHO05D000007 1.7e-11 72.8 78 44.9
FvH4_3g06911 Fragaria vesca HOM05D001538 ORTHO05D000007 2.2e-11 72.4 99 32.3
TPR.G4426 Trifolium pratense HOM05D001538 ORTHO05D000007 2.2e-11 72.4 95 42.1
Lj8C741T17 Lonicera japonica HOM05D001538 ORTHO05D000007 3.8e-11 71.6 92 38.0
TPR.G977 Trifolium pratense HOM05D001538 ORTHO05D016346 3.8e-11 71.6 85 40.0
Psat1g196920 Pisum sativum HOM05D001538 ORTHO05D000007 8.5e-11 70.5 94 33.0
Medtr0014s0120 Medicago truncatula HOM05D001538 ORTHO05D000007 1.1e-10 70.1 70 48.6
Psat3g124560 Pisum sativum HOM05D001538 ORTHO05D000007 1.1e-10 70.1 84 39.3
Medtr8g040870 Medicago truncatula HOM05D001538 ORTHO05D000007 1.5e-10 69.7 81 42.0
Lj3P676T23 Lonicera japonica HOM05D001538 ORTHO05D000007 1.9e-10 69.3 92 32.6
Medtr8g104770 Medicago truncatula HOM05D001538 ORTHO05D000007 1.9e-10 69.3 91 35.2
Lj5P781T15 Lonicera japonica HOM05D001538 ORTHO05D000007 2.5e-10 68.9 87 35.6
Lju1953C0G19 Lonicera japonica HOM05D001538 ORTHO05D000007 2.5e-10 68.9 92 34.8
Lj8P741T37 Lonicera japonica HOM05D001538 ORTHO05D000007 3.2e-10 68.6 92 34.8
Psat7g193320 Pisum sativum HOM05D001538 ORTHO05D000007 3.2e-10 68.6 93 37.6
TPR.G27759 Trifolium pratense HOM05D001538 ORTHO05D000007 4.2e-10 68.2 45 66.7
Lj8C744T6 Lonicera japonica HOM05D001538 ORTHO05D000007 5.5e-10 67.8 94 33.0
Lj9C691T2 Lonicera japonica HOM05D001538 ORTHO05D000007 9.4e-10 67.0 92 33.7
Medtr2g013990 Medicago truncatula HOM05D001538 ORTHO05D000007 9.4e-10 67.0 92 40.2
Medtr4g031410 Medicago truncatula HOM05D001538 ORTHO05D000007 9.4e-10 67.0 92 39.1
Medtr4g031755 Medicago truncatula HOM05D001538 ORTHO05D000007 9.4e-10 67.0 92 39.1
Lalb_Chr09g0334161 Lupinus albus HOM05D001538 ORTHO05D000007 1.6e-09 66.2 73 43.8
Medtr1g034250 Medicago truncatula HOM05D001538 ORTHO05D000007 1.6e-09 66.2 52 55.8
Medtr3g032560 Medicago truncatula HOM05D001538 ORTHO05D000007 1.6e-09 66.2 57 49.1
Medtr8g045340 Medicago truncatula HOM05D001538 ORTHO05D000007 1.6e-09 66.2 92 38.0
Medtr6g061130 Medicago truncatula HOM05D001538 ORTHO05D000007 2.1e-09 65.9 52 51.9
TPR.G24447 Trifolium pratense HOM05D000003 ORTHO05D000006 2.1e-09 65.9 40 75.0
Aqoxy4G02901 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 2.7e-09 65.5 92 31.5
Lj1A253G10 Lonicera japonica HOM05D043681 ORTHO05D000007 2.7e-09 65.5 81 35.8
Medtr0597s0030 Medicago truncatula HOM05D001538 ORTHO05D000007 2.7e-09 65.5 50 56.0
Medtr7g056053 Medicago truncatula HOM05D001538 ORTHO05D000007 2.7e-09 65.5 73 45.2
PSO761G0353 Papaver somniferum HOM05D001538 ORTHO05D000007 2.7e-09 65.5 99 36.4
Aqoxy2G01417 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 3.6e-09 65.1 92 29.3
FvH4_7g13962 Fragaria vesca HOM05D001538 ORTHO05D000007 6.1e-09 64.3 93 36.6
Medtr0063s0100 Medicago truncatula HOM05D001538 ORTHO05D000007 8.0e-09 63.9 59 44.1
Medtr2g043290 Medicago truncatula HOM05D001538 ORTHO05D000007 8.0e-09 63.9 49 57.1
Lju41C61G11 Lonicera japonica HOM05D001538 ORTHO05D000007 1.0e-08 63.5 90 34.4
Medtr5g060840 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-08 62.4 92 34.8
Medtr5g460950 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-08 62.4 92 34.8
Psat4g055000 Pisum sativum HOM05D001538 ORTHO05D000007 2.3e-08 62.4 93 33.3
Lj8C741G12 Lonicera japonica HOM05D001538 ORTHO05D000007 3.0e-08 62.0 84 36.9
TPR.G15478 Trifolium pratense HOM05D001538 ORTHO05D000007 5.2e-08 61.2 39 69.2
Lju2422C0T10 Lonicera japonica HOM05D001538 ORTHO05D000007 8.8e-08 60.5 91 33.0
Medtr8g445160 Medicago truncatula HOM05D000009 ORTHO05D000007 1.1e-07 60.1 60 48.3
Psat4g074680 Pisum sativum HOM05D001538 ORTHO05D000007 1.1e-07 60.1 93 32.3
Lj1P173T42 Lonicera japonica HOM05D001538 ORTHO05D000007 2.0e-07 59.3 87 35.6
TPR.G16012 Trifolium pratense HOM05D001538 ORTHO05D000007 2.0e-07 59.3 41 68.3
Medtr2g054220 Medicago truncatula HOM05D001538 ORTHO05D000007 2.6e-07 58.9 34 73.5
Medtr7g013110 Medicago truncatula HOM05D016686 ORTHO05D000007 2.6e-07 58.9 77 41.6
Atru.chr10.366 Acer truncatum HOM05D001538 ORTHO05D000007 3.3e-07 58.5 84 33.3
Medtr2g032880 Medicago truncatula HOM05D001538 ORTHO05D000007 3.3e-07 58.5 92 38.0
Phvul.004G102400 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 4.4e-07 58.2 77 37.7
PSO832G4369 Papaver somniferum HOM05D002145 ORTHO05D000007 5.7e-07 57.8 94 33.0
Aqoxy4G00948 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 7.5e-07 57.4 99 25.3
Aqoxy5G01605 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.5e-07 57.4 99 29.3
Lj8C740T13 Lonicera japonica HOM05D001538 ORTHO05D000007 7.5e-07 57.4 88 33.0
Medtr4g031785 Medicago truncatula HOM05D001538 ORTHO05D000007 9.7e-07 57.0 92 34.8
PSO170G3437 Papaver somniferum HOM05D002145 ORTHO05D000007 9.7e-07 57.0 104 32.7
Lj2C4G6 Lonicera japonica HOM05D001538 ORTHO05D000007 1.3e-06 56.6 81 34.6
Lju2422C0T12 Lonicera japonica HOM05D001538 ORTHO05D000007 1.3e-06 56.6 95 35.8
PSO111G0075 Papaver somniferum HOM05D002145 ORTHO05D000007 1.3e-06 56.6 97 30.9
Atru.chr2.2450 Acer truncatum HOM05D001538 ORTHO05D000007 1.7e-06 56.2 78 38.5
Phvul.009G209000 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.7e-06 56.2 84 38.1
Atru.chr9.296 Acer truncatum HOM05D001538 ORTHO05D000007 2.2e-06 55.8 71 38.0
PSO017G3709 Papaver somniferum HOM05D002145 ORTHO05D000007 3.7e-06 55.1 89 32.6
PSO782G0923 Papaver somniferum HOM05D002145 ORTHO05D000007 3.7e-06 55.1 88 31.8
Nn4g24897 Nelumbo nucifera HOM05D021400 ORTHO05D000007 4.8e-06 54.7 83 28.9
PSO127G0005 Papaver somniferum HOM05D002145 ORTHO05D000007 4.8e-06 54.7 102 27.5
PSO509G0019 Papaver somniferum HOM05D002145 ORTHO05D000007 4.8e-06 54.7 102 27.5
PSO561G0056 Papaver somniferum HOM05D002145 ORTHO05D000007 4.8e-06 54.7 102 27.5
FvH4_4g02432 Fragaria vesca HOM05D014581 ORTHO05D017919 6.3e-06 54.3 46 54.3
Medtr3g086820 Medicago truncatula HOM05D001538 ORTHO05D000007 6.3e-06 54.3 92 37.0
PSO357G0480 Papaver somniferum HOM05D002145 ORTHO05D000007 6.3e-06 54.3 89 32.6
PSO832G4581 Papaver somniferum HOM05D002145 ORTHO05D000007 8.2e-06 53.9 88 33.0


User provided reference genes

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