Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G15796 Trifolium pratense HOM05D002291 ORTHO05D048899 2.0e-56 222.2 116 100.0
Medtr4g116610 Medicago truncatula HOM05D002291 ORTHO05D048899 1.5e-19 99.8 108 52.8
Glyma.13G157000 Glycine max HOM05D002291 ORTHO05D002496 6.8e-12 74.3 100 46.0
Glyma.17G104600 Glycine max HOM05D002291 ORTHO05D002496 2.8e-10 68.9 89 48.3
Glyma.09G094900 Glycine max HOM05D002291 ORTHO05D002496 4.1e-09 65.1 73 52.1
Phvul.009G209300 Phaseolus vulgaris HOM05D002291 ORTHO05D002496 4.1e-09 65.1 68 51.5
VMungo1309G2977 Vigna mungo HOM05D002291 ORTHO05D002496 9.1e-09 63.9 87 49.4
Glyma.15G202600 Glycine max HOM05D002291 ORTHO05D002496 2.0e-08 62.8 80 50.0
Phvul.003G175100 Phaseolus vulgaris HOM05D002291 ORTHO05D002496 2.7e-08 62.4 84 51.2
TPR.G22803 Trifolium pratense HOM05D002291 ORTHO05D002496 3.5e-08 62.0 70 50.0
Ca_13603_v3 Cicer arietinum L. HOM05D002291 ORTHO05D002496 7.7e-08 60.8 67 50.7
Ca_30444_v3 Cicer arietinum L. HOM05D002291 ORTHO05D002496 7.7e-08 60.8 67 50.7
Lalb_Chr07g0179531 Lupinus albus HOM05D002291 ORTHO05D002496 2.3e-07 59.3 68 50.0
Lalb_Chr13g0301181 Lupinus albus HOM05D002291 ORTHO05D002496 2.3e-07 59.3 68 51.5
Duzib168G2034 Durio zibethinus HOM05D002291 ORTHO05D002496 2.9e-07 58.9 67 55.2
Lalb_Chr11g0072841 Lupinus albus HOM05D002291 ORTHO05D002496 1.1e-06 57.0 68 47.1
Atru.chr7.219 Acer truncatum HOM05D002291 ORTHO05D002496 1.5e-06 56.6 78 42.3
CiPaw.15G181400 Carya illinoinensis HOM05D002291 ORTHO05D002496 1.5e-06 56.6 55 49.1
Ciclev10009990m.g Citrus clementina HOM05D002291 ORTHO05D002496 1.5e-06 56.6 56 50.0
Gohir.D06G048800 Gossypium hirsutum HOM05D002291 ORTHO05D002496 3.3e-06 55.5 68 48.5
Gorai.010G055000 Gossypium raimondii HOM05D002291 ORTHO05D002496 3.3e-06 55.5 68 48.5
Medtr2g461270 Medicago truncatula HOM05D002291 ORTHO05D002496 3.3e-06 55.5 55 45.5
Gorai.004G275000 Gossypium raimondii HOM05D002291 ORTHO05D002496 4.2e-06 55.1 67 49.3
Lalb_Chr23g0275801 Lupinus albus HOM05D002291 ORTHO05D002496 4.2e-06 55.1 55 49.1
Lj5g0000889 Lotus japonicus HOM05D002291 ORTHO05D002496 5.5e-06 54.7 55 49.1
AL4G45830 Arabidopsis lyrata HOM05D002291 ORTHO05D002496 7.2e-06 54.3 81 42.0
AL4G45850 Arabidopsis lyrata HOM05D002291 ORTHO05D002496 7.2e-06 54.3 81 42.0
AL4G45870 Arabidopsis lyrata HOM05D002291 ORTHO05D002496 7.2e-06 54.3 81 42.0
AL4G45890 Arabidopsis lyrata HOM05D002291 ORTHO05D002496 7.2e-06 54.3 81 42.0
AT2G46490 Arabidopsis thaliana HOM05D002291 ORTHO05D002496 7.2e-06 54.3 81 42.0
Carub.0004s2917 Capsella rubella HOM05D002291 ORTHO05D002496 7.2e-06 54.3 81 42.0
Cfa020885 Carpinus fangiana HOM05D002291 ORTHO05D002496 7.2e-06 54.3 55 52.7
Psat0s4009g0080 Pisum sativum HOM05D002291 ORTHO05D002496 9.5e-06 53.9 82 46.3


User provided reference genes

Program Settings