Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G15775 Trifolium pratense HOM05D003638 ORTHO05D003202 5.1e-54 214.2 109 100.0
Medtr4g116480 Medicago truncatula HOM05D003638 ORTHO05D003202 2.0e-21 105.9 103 62.1
Glyma.17G105300 Glycine max HOM05D003638 ORTHO05D003202 2.6e-21 105.5 109 58.7
Psat4g033360 Pisum sativum HOM05D003638 ORTHO05D003202 2.6e-21 105.5 113 59.3
Psat4g033320 Pisum sativum HOM05D003638 ORTHO05D003202 3.7e-20 101.7 108 63.0
Phvul.003G174500 Phaseolus vulgaris HOM05D003638 ORTHO05D003202 1.2e-15 86.7 99 51.5
Lj4g0017179 Lotus japonicus HOM05D053320 ORTHO05D003202 2.3e-14 82.4 108 50.9
Manes.06G041300 Manihot esculenta HOM05D003638 ORTHO05D003202 8.9e-14 80.5 98 51.0
PGSC0003DMG401030736 Solanum tuberosum HOM05D003638 ORTHO05D003202 2.6e-13 79.0 93 50.5
Dinv41427 Davidia involucrata HOM05D003638 ORTHO05D003202 3.4e-13 78.6 99 51.5
Solyc07g007160.3 Solanum lycopersicum HOM05D003638 ORTHO05D003202 5.8e-13 77.8 100 49.0
Sopen07g003210 Solanum pennellii HOM05D003638 ORTHO05D003202 5.8e-13 77.8 100 49.0
Hma1.2p1_0182F.1_g080450 Hydrangea macrophylla HOM05D003638 ORTHO05D003202 1.3e-12 76.6 94 53.2
Duzib168G1473 Durio zibethinus HOM05D003638 ORTHO05D003202 2.9e-12 75.5 98 50.0
Nitab4.5_0001555g0090 Nicotiana tabacum HOM05D003638 ORTHO05D003202 2.9e-12 75.5 93 49.5
Peaxi162Scf00391g00019 Petunia axillaris HOM05D003638 ORTHO05D003202 3.7e-12 75.1 98 51.0
GSVIVG01012890001 Vitis vinifera HOM05D003638 ORTHO05D003202 3.7e-12 75.1 103 50.5
Thecc.09G141300 Theobroma cacao HOM05D003638 ORTHO05D003202 4.9e-12 74.7 119 45.4
Lalb_Chr23g0275841 Lupinus albus HOM05D003638 ORTHO05D003202 1.4e-11 73.2 99 50.5
Actinidia04244 Actinidia chinensis HOM05D003638 ORTHO05D003202 1.9e-11 72.8 103 46.6
MD02G1013200 Malus domestica HOM05D003638 ORTHO05D003202 2.4e-11 72.4 89 51.7
Oeu055917.1 Olea europaea HOM05D003638 ORTHO05D003202 4.1e-11 71.6 86 50.0
Glyma.15G201800 Glycine max HOM05D003638 ORTHO05D003202 5.4e-11 71.2 95 46.3
Oeu051707.1 Olea europaea HOM05D003638 ORTHO05D003202 5.4e-11 71.2 86 51.2
TAR383G0618 Trochodendron aralioides HOM05D003638 ORTHO05D003202 5.4e-11 71.2 111 45.9
VMungo1215G0714 Vigna mungo HOM05D003638 ORTHO05D003202 7.0e-11 70.9 100 48.0
CSS0017335 Camellia sinensis var. sinensis HOM05D003638 ORTHO05D003202 9.2e-11 70.5 98 48.0
Dinv22136 Davidia involucrata HOM05D003638 ORTHO05D003202 1.2e-10 70.1 96 51.0
Dinv42915 Davidia involucrata HOM05D003638 ORTHO05D003202 1.2e-10 70.1 96 51.0
Dinv43185 Davidia involucrata HOM05D003638 ORTHO05D003202 1.2e-10 70.1 96 51.0
Lalb_Chr08g0233671 Lupinus albus HOM05D003638 ORTHO05D003202 1.2e-10 70.1 96 43.8
arahy.Tifrunner.gnm1.ann1.8W4I3Q Arachis hypogaea HOM05D003638 ORTHO05D003202 1.6e-10 69.7 95 45.3
Gorai.013G237500 Gossypium raimondii HOM05D003638 ORTHO05D003202 1.6e-10 69.7 96 50.0
vmacro21884 Vaccinium macrocarpon HOM05D003638 ORTHO05D003202 1.6e-10 69.7 96 50.0
Gohir.D13G208400 Gossypium hirsutum HOM05D003638 ORTHO05D003202 2.0e-10 69.3 96 50.0
Cc06_g07440 Coffea canephora HOM05D003638 ORTHO05D003202 2.7e-10 68.9 95 47.4
Gohir.A13G203100 Gossypium hirsutum HOM05D003638 ORTHO05D003202 2.7e-10 68.9 96 50.0
Lj4g0006118 Lotus japonicus HOM05D053320 ORTHO05D003202 2.7e-10 68.9 110 44.5
Glyma.09G096300 Glycine max HOM05D003638 ORTHO05D003202 3.5e-10 68.6 96 44.8
Solyc07g007170.3 Solanum lycopersicum HOM05D003638 ORTHO05D003202 3.5e-10 68.6 108 45.4
Ah.14g078720 Amaranthus hybridus HOM05D003638 ORTHO05D003202 4.6e-10 68.2 98 52.0
Lj6g0008260 Lotus japonicus HOM05D003638 ORTHO05D003202 4.6e-10 68.2 101 46.5
Nitab4.5_0001021g0070 Nicotiana tabacum HOM05D003638 ORTHO05D003202 4.6e-10 68.2 92 46.7
Potri.018G114500 Populus trichocarpa HOM05D003638 ORTHO05D003202 4.6e-10 68.2 105 44.8
Cfa020895 Carpinus fangiana HOM05D003638 ORTHO05D003202 6.0e-10 67.8 110 42.7
Haze_19322 Corylus avellana HOM05D003638 ORTHO05D003202 6.0e-10 67.8 98 45.9
TAR626G0601 Trochodendron aralioides HOM05D003638 ORTHO05D003202 6.0e-10 67.8 100 45.0
Aqoxy7G03537 Aquilegia oxysepala HOM05D003638 ORTHO05D003202 7.8e-10 67.4 99 45.5
CsaV3_2G003550 Cucumis sativus L. HOM05D003638 ORTHO05D003202 7.8e-10 67.4 109 46.8
Gohir.A08G095362 Gossypium hirsutum HOM05D003638 ORTHO05D003202 7.8e-10 67.4 98 44.9
Lalb_Chr08g0233781 Lupinus albus HOM05D003638 ORTHO05D003202 7.8e-10 67.4 96 44.8
TWI63G0270 Tripterygium wilfordii HOM05D003638 ORTHO05D003202 7.8e-10 67.4 94 50.0
CANSAT11G2120 Cannabis sativa HOM05D003638 ORTHO05D003202 1.0e-09 67.0 104 46.2
Duzib187G0526 Durio zibethinus HOM05D003638 ORTHO05D003202 1.0e-09 67.0 101 43.6
Psat1g023080 Pisum sativum HOM05D003638 ORTHO05D003202 1.0e-09 67.0 93 47.3
MD15G1160000 Malus domestica HOM05D003638 ORTHO05D003202 1.3e-09 66.6 104 48.1
Actinidia21912 Actinidia chinensis HOM05D003638 ORTHO05D003202 1.7e-09 66.2 94 46.8
arahy.Tifrunner.gnm1.ann1.ZD4V4J Arachis hypogaea HOM05D003638 ORTHO05D003202 1.7e-09 66.2 91 45.1
Sopen06g024020 Solanum pennellii HOM05D003638 ORTHO05D003202 1.7e-09 66.2 108 45.4
Sopen07g003220 Solanum pennellii HOM05D003638 ORTHO05D003202 1.7e-09 66.2 108 44.4
TPR.G25664 Trifolium pratense HOM05D003638 ORTHO05D003202 1.7e-09 66.2 96 45.8
CSS0003684 Camellia sinensis var. sinensis HOM05D003638 ORTHO05D003202 2.3e-09 65.9 99 44.4
ClCG02G017240 Citrullus lanatus HOM05D003638 ORTHO05D003202 2.3e-09 65.9 97 48.5
Nitab4.5_0007535g0020 Nicotiana tabacum HOM05D003638 ORTHO05D003202 3.0e-09 65.5 95 45.3
CSS0018942 Camellia sinensis var. sinensis HOM05D003638 ORTHO05D003202 3.9e-09 65.1 99 44.4
Duzib187G0899 Durio zibethinus HOM05D003638 ORTHO05D003202 8.6e-09 63.9 100 45.0
PGSC0003DMG402030736 Solanum tuberosum HOM05D003638 ORTHO05D003202 8.6e-09 63.9 107 42.1
RcHm_v2.0_Chr2g0086711 Rosa chinensis HOM05D003638 ORTHO05D003202 1.1e-08 63.5 92 46.7
FvH4_1g01750 Fragaria vesca HOM05D003638 ORTHO05D003202 1.9e-08 62.8 95 44.2
Cpa.g.sc46.85 Carica papaya HOM05D003638 ORTHO05D003202 2.5e-08 62.4 90 47.8
FAN19G2555 Fragaria x ananassa HOM05D003638 ORTHO05D003202 2.5e-08 62.4 94 44.7
FAN28G0590 Fragaria x ananassa HOM05D003638 ORTHO05D003202 2.5e-08 62.4 94 44.7
Peaxi162Scf00108g00110 Petunia axillaris HOM05D003638 ORTHO05D003202 3.3e-08 62.0 95 46.3
Sed0014564 Sechium edule HOM05D003638 ORTHO05D003202 3.3e-08 62.0 93 47.3
FAN23G0723 Fragaria x ananassa HOM05D003638 ORTHO05D003202 4.3e-08 61.6 99 42.4
FAN26G1151 Fragaria x ananassa HOM05D003638 ORTHO05D003202 4.3e-08 61.6 99 42.4
Nitab4.5_0001751g0040 Nicotiana tabacum HOM05D003638 ORTHO05D003202 4.3e-08 61.6 93 45.2
VMungo1309G1330 Vigna mungo HOM05D003638 ORTHO05D003202 4.3e-08 61.6 92 42.4
CiPaw.16G118000 Carya illinoinensis HOM05D003638 ORTHO05D003202 5.6e-08 61.2 97 43.3
MELO3C004441.2 Cucumis melo HOM05D003638 ORTHO05D003202 5.6e-08 61.2 98 45.9
Gohir.A06G050200 Gossypium hirsutum HOM05D003638 ORTHO05D003202 5.6e-08 61.2 97 43.3
Potri.006G190300 Populus trichocarpa HOM05D003638 ORTHO05D003202 9.5e-08 60.5 91 45.1
EL10Ac8g18824 Beta vulgaris HOM05D003638 ORTHO05D003202 1.2e-07 60.1 87 48.3
Nitab4.5_0001021g0080 Nicotiana tabacum HOM05D003638 ORTHO05D003202 1.2e-07 60.1 79 46.8
arahy.Tifrunner.gnm1.ann1.V8YXJU Arachis hypogaea HOM05D003638 ORTHO05D003202 1.6e-07 59.7 101 39.6
Ciclev10009499m.g Citrus clementina HOM05D003638 ORTHO05D003202 1.6e-07 59.7 111 41.4
Gorai.010G056400 Gossypium raimondii HOM05D003638 ORTHO05D003202 1.6e-07 59.7 100 44.0
Medtr2g461020 Medicago truncatula HOM05D003638 ORTHO05D003202 1.6e-07 59.7 92 41.3
Nitab4.5_0005330g0090 Nicotiana tabacum HOM05D003638 ORTHO05D003202 2.8e-07 58.9 103 41.7
MBI15_g25866_MAGBIO Magnolia biondii HOM05D003638 ORTHO05D003202 3.6e-07 58.5 110 40.0
CiPaw.15G182800 Carya illinoinensis HOM05D003638 ORTHO05D003202 4.7e-07 58.2 100 45.0
Sabra18G0097400 Salix brachista HOM05D003638 ORTHO05D003202 4.7e-07 58.2 96 40.6
Cfa020896 Carpinus fangiana HOM05D003638 ORTHO05D003202 6.2e-07 57.8 91 44.0
Migut.K00380 Erythranthe guttata HOM05D003638 ORTHO05D003202 6.2e-07 57.8 104 41.3
QL02p091197 Quercus lobata HOM05D003638 ORTHO05D003202 6.2e-07 57.8 103 40.8
arahy.Tifrunner.gnm1.ann1.80FEVW Arachis hypogaea HOM05D003638 ORTHO05D003202 8.0e-07 57.4 99 42.4
HanXRQChr05g0137981 Helianthus annuus HOM05D003638 ORTHO05D003202 1.4e-06 56.6 97 45.4
ClCG06G012030 Citrullus lanatus HOM05D003638 ORTHO05D003202 1.8e-06 56.2 92 45.7
Rhsim01G0052400 Rhododendron simsii HOM05D003638 ORTHO05D003202 4.0e-06 55.1 101 39.6
Phvul.009G209800 Phaseolus vulgaris HOM05D003638 ORTHO05D003202 8.9e-06 53.9 98 41.8


User provided reference genes

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