Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G15757 Trifolium pratense HOM05D000823 ORTHO05D000088 4.0e-87 324.7 160 100.0
TPR.G34489 Trifolium pratense HOM05D000823 ORTHO05D000088 2.4e-47 192.6 111 89.2
TPR.G15766 Trifolium pratense HOM05D000823 ORTHO05D000088 7.1e-36 154.5 140 62.9
Psat6g011480 Pisum sativum HOM05D000823 ORTHO05D000088 1.7e-34 149.8 140 61.4
Ca_13317_v3 Cicer arietinum L. HOM05D000823 ORTHO05D000088 8.7e-34 147.5 140 60.0
TPR.G13699 Trifolium pratense HOM05D000823 ORTHO05D000088 1.9e-33 146.4 140 59.3
Medtr1g021270 Medicago truncatula HOM05D000823 ORTHO05D000088 3.6e-32 142.1 140 58.6
Lj5g0027331 Lotus japonicus HOM05D000823 ORTHO05D000088 1.5e-30 136.7 132 56.8
Lalb_Chr22g0355281 Lupinus albus HOM05D000823 ORTHO05D000088 1.5e-30 136.7 132 57.6
Glyma.14G079200 Glycine max HOM05D000823 ORTHO05D000088 1.3e-29 133.7 139 53.2
TPR.G13675 Trifolium pratense HOM05D000823 ORTHO05D000088 3.8e-29 132.1 173 48.6
Glyma.17G245900 Glycine max HOM05D000823 ORTHO05D000088 8.4e-29 131.0 139 53.2
VMungo0647G0862 Vigna mungo HOM05D000823 ORTHO05D000088 8.4e-29 131.0 119 57.1
Medtr1g021440 Medicago truncatula HOM05D000823 ORTHO05D000088 1.1e-28 130.6 128 54.7
TPR.G726 Trifolium pratense HOM05D000823 ORTHO05D000088 1.4e-28 130.2 83 79.5
Medtr1g021360 Medicago truncatula HOM05D000823 ORTHO05D000088 2.4e-28 129.4 119 58.8
arahy.Tifrunner.gnm1.ann1.8D6Z2X Arachis hypogaea HOM05D000823 ORTHO05D000088 7.1e-28 127.9 134 55.2
arahy.Tifrunner.gnm1.ann1.NFB9X0 Arachis hypogaea HOM05D000823 ORTHO05D000088 7.1e-28 127.9 134 55.2
Medtr1g021320 Medicago truncatula HOM05D000823 ORTHO05D000088 3.5e-27 125.6 124 54.0
Phvul.001G018500 Phaseolus vulgaris HOM05D000823 ORTHO05D000088 1.0e-26 124.0 120 53.3
arahy.Tifrunner.gnm1.ann1.00BQAA Arachis hypogaea HOM05D000823 ORTHO05D000088 3.0e-26 122.5 140 52.1
Medtr1g021295 Medicago truncatula HOM05D000823 ORTHO05D000088 8.7e-26 120.9 121 55.4
GSVIVG01009586001 Vitis vinifera HOM05D000823 ORTHO05D000088 1.3e-24 117.1 117 49.6
Cfa018483 Carpinus fangiana HOM05D000823 ORTHO05D000088 2.8e-24 115.9 142 46.5
Medtr1g021330 Medicago truncatula HOM05D000823 ORTHO05D000088 6.2e-24 114.8 126 48.4
HanXRQChr04g0104181 Helianthus annuus HOM05D000823 ORTHO05D000088 8.1e-24 114.4 121 49.6
QL02p006444 Quercus lobata HOM05D000823 ORTHO05D000088 1.1e-23 114.0 116 52.6
CsaV3_3G044580 Cucumis sativus L. HOM05D000823 ORTHO05D000088 1.8e-23 113.2 114 48.2
MSTRG.1316 Avicennia marina HOM05D000823 ORTHO05D000088 1.2e-22 110.5 120 44.2
Hma1.2p1_0023F.1_g015270 Hydrangea macrophylla HOM05D000823 ORTHO05D000088 4.5e-22 108.6 118 45.8
Ciclev10000881m.g Citrus clementina HOM05D000823 ORTHO05D000088 1.3e-21 107.1 113 48.7
Potri.014G036800 Populus trichocarpa HOM05D000823 ORTHO05D000088 1.3e-21 107.1 133 43.6
Actinidia38035 Actinidia chinensis HOM05D000823 ORTHO05D000088 1.7e-21 106.7 117 45.3
TWI12G0966 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 1.7e-21 106.7 125 42.4
PGR031G0338 Punica granatum HOM05D000823 ORTHO05D000088 2.2e-21 106.3 108 50.9
Duzib093G1908 Durio zibethinus HOM05D000823 ORTHO05D000088 3.8e-21 105.5 114 48.2
Nitab4.5_0000068g0140 Nicotiana tabacum HOM05D000823 ORTHO05D000088 3.8e-21 105.5 138 40.6
THA.LOC104803403 Tarenaya hassleriana HOM05D000823 ORTHO05D000088 3.8e-21 105.5 127 43.3
Thecc.08G016800 Theobroma cacao HOM05D000823 ORTHO05D000088 3.8e-21 105.5 135 45.2
MD15G1034200 Malus domestica HOM05D000823 ORTHO05D000088 4.9e-21 105.1 117 48.7
Peaxi162Scf01514g00024 Petunia axillaris HOM05D000823 ORTHO05D000088 4.9e-21 105.1 117 43.6
SalBow7G0768 Salvia bowleyana HOM05D000823 ORTHO05D000088 4.9e-21 105.1 149 37.6
Dinv39357 Davidia involucrata HOM05D000823 ORTHO05D000088 6.4e-21 104.8 127 44.9
ECA247G3085 Erigeron canadensis HOM05D000823 ORTHO05D000088 6.4e-21 104.8 119 45.4
CANSAT25G0071 Cannabis sativa HOM05D000823 ORTHO05D000088 8.4e-21 104.4 117 47.9
COL.COLO4_26426 Corchorus olitorius HOM05D000823 ORTHO05D000088 1.1e-20 104.0 135 43.7
Migut.C00649 Erythranthe guttata HOM05D000823 ORTHO05D000088 1.1e-20 104.0 120 43.3
Gorai.005G105400 Gossypium raimondii HOM05D000823 ORTHO05D000088 1.4e-20 103.6 128 43.0
CAN.G371.85 Capsicum annuum HOM05D000823 ORTHO05D000088 1.9e-20 103.2 118 43.2
FvH4_2g40640 Fragaria vesca HOM05D000823 ORTHO05D000088 1.9e-20 103.2 119 45.4
Atru.chr13.593 Acer truncatum HOM05D000823 ORTHO05D000088 2.5e-20 102.8 114 47.4
Gohir.D02G093100 Gossypium hirsutum HOM05D000823 ORTHO05D000088 2.5e-20 102.8 128 43.0
Gohir.A03G116300 Gossypium hirsutum HOM05D000823 ORTHO05D000088 3.2e-20 102.4 128 43.8
Hma1.2p1_0260F.1_g104520 Hydrangea macrophylla HOM05D000823 ORTHO05D000088 3.2e-20 102.4 117 46.2
Sabra14G0026500 Salix brachista HOM05D000823 ORTHO05D000088 3.2e-20 102.4 135 42.2
SGA_v2.0_scaffold82G26218 Striga asiatica HOM05D000823 ORTHO05D000088 3.2e-20 102.4 124 43.5
Nitab4.5_0002280g0040 Nicotiana tabacum HOM05D000823 ORTHO05D000088 4.2e-20 102.1 128 41.4
Eucgr.F02399 Eucalyptus grandis HOM05D000823 ORTHO05D000088 9.3e-20 100.9 112 48.2
RcHm_v2.0_Chr6g0300031 Rosa chinensis HOM05D000823 ORTHO05D000088 1.2e-19 100.5 117 46.2
EL10Ac1g01749 Beta vulgaris HOM05D000823 ORTHO05D000088 1.6e-19 100.1 136 42.6
CiPaw.15G066400 Carya illinoinensis HOM05D000823 ORTHO05D000088 1.6e-19 100.1 121 43.8
Lsat_1_v5_gn_1_19200 Lactuca sativa HOM05D000823 ORTHO05D000088 4.6e-19 98.6 123 40.7
Cc10_g03680 Coffea canephora HOM05D000823 ORTHO05D000088 6.0e-19 98.2 115 44.3
Psat2g024080 Pisum sativum HOM05D000823 ORTHO05D000088 6.0e-19 98.2 93 58.1
Prupe.1G388200 Prunus persica HOM05D000823 ORTHO05D000088 1.0e-18 97.4 107 46.7
Sc15g0006570 Simmondsia chinensis HOM05D000823 ORTHO05D000088 1.8e-18 96.7 137 38.7
MELO3C018249.2 Cucumis melo HOM05D000823 ORTHO05D000088 2.3e-18 96.3 109 44.0
Medtr1g021350 Medicago truncatula HOM05D000823 ORTHO05D000088 3.0e-18 95.9 73 64.4
FAN27G1265 Fragaria x ananassa HOM05D000823 ORTHO05D000088 3.9e-18 95.5 110 44.5
Sopen04g033170 Solanum pennellii HOM05D000823 ORTHO05D000088 3.9e-18 95.5 118 43.2
vmacro04480 Vaccinium macrocarpon HOM05D000823 ORTHO05D000088 3.9e-18 95.5 118 42.4
Ah.11g043200 Amaranthus hybridus HOM05D000823 ORTHO05D000088 5.1e-18 95.1 127 40.2
Medtr1g021400 Medicago truncatula HOM05D000823 ORTHO05D000088 5.1e-18 95.1 126 45.2
Solyc04g079590.3 Solanum lycopersicum HOM05D000823 ORTHO05D000088 5.1e-18 95.1 118 42.4
Rhsim07G0234100 Rhododendron simsii HOM05D000823 ORTHO05D000088 8.7e-18 94.4 118 41.5
Medtr1g021410 Medicago truncatula HOM05D000823 ORTHO05D000088 1.5e-17 93.6 126 44.4
Oeu006163.1 Olea europaea HOM05D000823 ORTHO05D000088 1.5e-17 93.6 118 42.4
MD08G1039600 Malus domestica HOM05D000823 ORTHO05D000088 1.3e-16 90.5 106 44.3
Medtr1g021435 Medicago truncatula HOM05D000823 ORTHO05D000088 1.6e-16 90.1 131 38.9
Manes.05G168900 Manihot esculenta HOM05D000823 ORTHO05D000088 3.7e-16 89.0 121 43.8
DCAR_012760 Daucus carota HOM05D000823 ORTHO05D000088 2.4e-15 86.3 118 39.0
Medtr1g021380 Medicago truncatula HOM05D000823 ORTHO05D000088 2.4e-15 86.3 118 40.7
Hund26609 Selenicereus undatus HOM05D000823 ORTHO05D000088 1.2e-14 84.0 127 39.4
AUR62033880 Chenopodium quinoa HOM05D000823 ORTHO05D000088 1.0e-13 80.9 121 35.5
Medtr6g036740 Medicago truncatula HOM05D000823 ORTHO05D000088 1.7e-13 80.1 86 50.0
Cpa.g.c39547 Carica papaya HOM05D000823 ORTHO05D000088 5.5e-12 75.1 71 52.1
FAN15G0917 Fragaria x ananassa HOM05D000823 ORTHO05D000088 9.3e-12 74.3 63 54.0
TAR625G1233 Trochodendron aralioides HOM05D000823 ORTHO05D000088 2.3e-10 69.7 109 37.6
QL11p039132 Quercus lobata HOM05D000823 ORTHO05D000088 1.1e-09 67.4 108 38.9
Cfa004943 Carpinus fangiana HOM05D001372 ORTHO05D002010 1.5e-09 67.0 106 35.8
Sopen01g051130 Solanum pennellii HOM05D000823 ORTHO05D000088 1.5e-09 67.0 101 36.6
TPR.G32518 Trifolium pratense HOM05D000823 ORTHO05D000088 1.9e-09 66.6 71 43.7
Nitab4.5_0001401g0170 Nicotiana tabacum HOM05D000823 ORTHO05D000088 5.7e-09 65.1 101 33.7
Glyma.11G124300 Glycine max HOM05D000823 ORTHO05D000088 1.6e-08 63.5 106 36.8
TAR376G0237 Trochodendron aralioides HOM05D000823 ORTHO05D000088 2.2e-08 63.2 112 35.7
Nitab4.5_0008194g0030 Nicotiana tabacum HOM05D000823 ORTHO05D000088 2.8e-08 62.8 138 29.0
Solyc01g108930.3 Solanum lycopersicum HOM05D000823 ORTHO05D000088 4.8e-08 62.0 101 34.7
Cc02_g18270 Coffea canephora HOM05D000823 ORTHO05D000088 6.3e-08 61.6 106 37.7
CAN.G322.80 Capsicum annuum HOM05D000823 ORTHO05D000088 1.1e-07 60.8 109 31.2
Peaxi162Scf00016g01343 Petunia axillaris HOM05D000823 ORTHO05D000088 1.1e-07 60.8 102 35.3
Phvul.011G050700 Phaseolus vulgaris HOM05D000823 ORTHO05D000088 1.8e-07 60.1 106 33.0
MSTRG.20125 Avicennia marina HOM05D000823 ORTHO05D000088 3.1e-07 59.3 102 38.2
Phvul.011G050800 Phaseolus vulgaris HOM05D000823 ORTHO05D000088 3.1e-07 59.3 109 36.7
MBI16_g19885_MAGBIO Magnolia biondii HOM05D000823 ORTHO05D000088 4.1e-07 58.9 121 29.8
Rhsim11G0170400 Rhododendron simsii HOM05D000823 ORTHO05D000088 4.1e-07 58.9 65 40.0
Gohir.D10G094400 Gossypium hirsutum HOM05D000395 ORTHO05D000088 2.6e-06 56.2 117 29.9
Lj5A204G92 Lonicera japonica HOM05D000823 ORTHO05D000088 2.6e-06 56.2 103 35.9
Prupe.8G113100 Prunus persica HOM05D000823 ORTHO05D000088 2.6e-06 56.2 102 30.4
RcHm_v2.0_Chr6g0259781 Rosa chinensis HOM05D000823 ORTHO05D000088 3.4e-06 55.8 105 32.4
Gohir.A10G093700 Gossypium hirsutum HOM05D000395 ORTHO05D000088 4.5e-06 55.5 117 29.1
Nn5g29398 Nelumbo nucifera HOM05D000823 ORTHO05D000088 4.5e-06 55.5 100 41.0
Gorai.011G103800 Gossypium raimondii HOM05D000395 ORTHO05D000088 5.9e-06 55.1 117 29.1
TWI09G0236 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 5.9e-06 55.1 117 31.6
Ah.11g049330 Amaranthus hybridus HOM05D000395 ORTHO05D000088 7.7e-06 54.7 105 31.4


User provided reference genes

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