Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 3.4e-250 867.8 428 100.0
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 3.4e-218 761.5 426 88.3
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 2.1e-215 752.3 429 87.2
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 3.5e-207 724.9 439 81.8
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 3.5e-183 645.2 433 74.6
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 5.1e-182 641.3 425 74.1
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 1.7e-169 599.7 429 70.6
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 9.7e-165 583.9 430 68.8
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 6.5e-153 544.7 430 65.3
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 7.5e-149 531.2 384 70.6
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 4.8e-140 501.9 357 74.5
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 3.8e-137 492.3 433 58.2
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 3.6e-135 485.7 432 57.6
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 1.0e-134 484.2 428 58.9
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 1.0e-134 484.2 429 58.0
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 2.3e-134 483.0 422 57.8
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 1.5e-133 480.3 425 58.6
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 2.0e-133 479.9 422 57.8
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 3.4e-133 479.2 422 57.3
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 3.4e-133 479.2 428 58.2
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 5.7e-133 478.4 415 58.3
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 9.8e-133 477.6 430 57.0
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 1.3e-132 477.2 427 58.3
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 3.7e-132 475.7 419 59.9
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 1.1e-131 474.2 420 56.7
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 1.4e-131 473.8 430 54.7
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 4.1e-131 472.2 428 56.5
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 7.0e-131 471.5 424 57.1
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 1.2e-130 470.7 428 58.2
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 2.0e-130 469.9 428 57.0
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 5.9e-130 468.4 423 54.8
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 1.7e-129 466.8 423 57.2
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 2.9e-129 466.1 433 55.4
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 5.0e-129 465.3 448 55.6
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 4.7e-127 458.8 434 58.1
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 6.8e-126 454.9 425 56.0
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 2.6e-125 453.0 428 57.5
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 1.7e-124 450.3 422 55.7
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 1.4e-123 447.2 426 53.5
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 1.9e-123 446.8 436 56.9
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 4.1e-123 445.7 435 53.1
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 7.0e-123 444.9 424 57.5
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 9.2e-123 444.5 432 52.3
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 2.0e-122 443.4 430 54.2
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 2.0e-122 443.4 451 51.7
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 2.0e-122 443.4 451 51.7
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 7.8e-122 441.4 426 53.3
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 1.0e-121 441.0 427 53.6
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 1.0e-121 441.0 462 51.7
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 1.0e-121 441.0 428 55.4
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 1.3e-121 440.7 546 46.0
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 1.7e-121 440.3 429 55.5
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 3.0e-121 439.5 440 52.7
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 5.0e-121 438.7 425 52.0
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 1.1e-120 437.6 423 54.4
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 2.5e-120 436.4 425 52.2
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 2.5e-120 436.4 425 54.1
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 3.3e-120 436.0 426 51.6
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 3.3e-120 436.0 429 55.2
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 3.3e-120 436.0 425 55.5
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 7.3e-120 434.9 426 52.3
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 1.2e-119 434.1 427 51.8
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 1.6e-119 433.7 413 55.4
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 3.6e-119 432.6 438 50.2
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 1.4e-118 430.6 430 53.3
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 2.6e-117 426.4 425 54.4
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 7.5e-117 424.9 429 51.7
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 7.5e-117 424.9 426 50.9
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 9.8e-117 424.5 483 49.1
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 2.4e-115 419.9 422 53.6
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 5.4e-115 418.7 433 52.2
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 1.6e-114 417.2 326 63.2
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 2.7e-114 416.4 430 51.4
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 1.3e-113 414.1 418 50.7
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 5.1e-113 412.1 425 52.5
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 2.3e-110 403.3 380 56.8
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 3.7e-108 396.0 449 50.6
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 3.5e-106 389.4 425 50.4
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 5.6e-104 382.1 376 54.5
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 6.2e-103 378.6 387 53.5
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 6.8e-102 375.2 426 47.4
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 2.0e-101 373.6 358 53.9
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 1.7e-100 370.5 448 47.3
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 4.9e-100 369.0 438 49.1
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 6.0e-98 362.1 410 46.6
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 2.3e-97 360.1 443 46.5
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 3.5e-90 336.3 430 44.2
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 5.1e-89 332.4 378 48.9
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 5.6e-88 328.9 340 52.9
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 8.1e-87 325.1 357 50.1
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 4.2e-83 312.8 423 42.6
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 6.7e-81 305.4 404 42.3
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 1.3e-79 301.2 435 41.6
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 1.1e-72 278.1 348 44.5
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 2.5e-72 276.9 350 50.0
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 1.4e-70 271.2 250 49.6
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 1.1e-64 251.5 359 42.6
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 8.5e-60 235.3 161 67.1
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 2.5e-56 223.8 303 42.6
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 1.1e-51 208.4 193 49.2
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 2.3e-49 200.7 481 29.3
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 5.3e-46 189.5 231 51.9
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 7.2e-35 152.5 130 51.5
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 3.0e-33 147.1 241 40.7
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 2.2e-31 141.0 83 79.5
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 6.3e-23 112.8 169 49.7
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 4.7e-18 96.7 132 43.2
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 3.7e-15 87.0 67 53.7
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 4.1e-14 83.6 238 27.7
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 1.1e-11 75.5 163 40.5
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 2.5e-11 74.3 100 54.0
CDE01G0194 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 8.3e-07 59.3 51 56.9


User provided reference genes

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