Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G15532 Trifolium pratense HOM05D008415 ORTHO05D010601 1.1e-75 286.6 144 100.0
Psat7g223880 Pisum sativum HOM05D008415 ORTHO05D010601 4.1e-35 151.8 147 59.2
Medtr4g060050 Medicago truncatula HOM05D008415 ORTHO05D010601 5.1e-33 144.8 123 63.4
Glyma.12G070700 Glycine max HOM05D008415 ORTHO05D010601 2.2e-28 129.4 136 56.6
Ca_19250_v3 Cicer arietinum L. HOM05D008415 ORTHO05D010601 1.4e-27 126.7 103 65.0
Lj3g0013437 Lotus japonicus HOM05D008415 ORTHO05D010601 2.7e-26 122.5 127 53.5
Glyma.11G154841 Glycine max HOM05D008415 ORTHO05D010601 1.6e-23 113.2 135 51.1
arahy.Tifrunner.gnm1.ann1.C7LIDW Arachis hypogaea HOM05D008415 ORTHO05D010601 6.2e-23 111.3 148 45.9
arahy.Tifrunner.gnm1.ann1.TY33PY Arachis hypogaea HOM05D008415 ORTHO05D010601 1.1e-22 110.5 157 43.9
Lalb_Chr19g0137361 Lupinus albus HOM05D008415 ORTHO05D010601 3.1e-22 109.0 117 53.0
QL01p023166 Quercus lobata HOM05D008415 ORTHO05D010601 1.2e-21 107.1 139 46.8
Haze_23892 Corylus avellana HOM05D008415 ORTHO05D010601 2.0e-21 106.3 114 53.5
Dinv32770 Davidia involucrata HOM05D008415 ORTHO05D010601 3.8e-20 102.1 146 41.8
Nitab4.5_0000650g0050 Nicotiana tabacum HOM05D008415 ORTHO05D010601 1.4e-19 100.1 133 43.6
Oeu059099.1 Olea europaea HOM05D008415 ORTHO05D010601 3.2e-19 99.0 130 43.8
Peaxi162Scf00351g00214 Petunia axillaris HOM05D008415 ORTHO05D010601 3.2e-19 99.0 131 41.2
TAR633G1891 Trochodendron aralioides HOM05D008415 ORTHO05D010601 7.1e-19 97.8 127 41.7
Rhsim01G0218700 Rhododendron simsii HOM05D008415 ORTHO05D010601 2.1e-18 96.3 104 53.8
Sed0001336 Sechium edule HOM05D008415 ORTHO05D010601 2.1e-18 96.3 155 37.4
ClCG02G021040 Citrullus lanatus HOM05D008415 ORTHO05D010601 2.7e-18 95.9 150 40.0
PGSC0003DMG400008064 Solanum tuberosum HOM05D008415 ORTHO05D010601 2.7e-18 95.9 118 48.3
vmacro14451 Vaccinium macrocarpon HOM05D008415 ORTHO05D010601 3.5e-18 95.5 105 51.4
SGA_v2.0_scaffold61G21159 Striga asiatica HOM05D008415 ORTHO05D010601 4.6e-18 95.1 129 41.1
VMungo1127G1728 Vigna mungo HOM05D008415 ORTHO05D010601 6.0e-18 94.7 118 46.6
Actinidia03741 Actinidia chinensis HOM05D008415 ORTHO05D010601 7.8e-18 94.4 94 55.3
Hma1.2p1_2585F.1_g324920 Hydrangea macrophylla HOM05D008415 ORTHO05D010601 7.8e-18 94.4 99 53.5
Eucgr.J00943 Eucalyptus grandis HOM05D008415 ORTHO05D010601 1.7e-17 93.2 113 45.1
CiPaw.14G078500 Carya illinoinensis HOM05D008415 ORTHO05D010601 2.3e-17 92.8 86 57.0
MELO3C025762.2 Cucumis melo HOM05D008415 ORTHO05D010601 2.3e-17 92.8 138 39.9
Hma1.2p1_1931F.1_g307990 Hydrangea macrophylla HOM05D008415 ORTHO05D010601 2.3e-17 92.8 98 53.1
Solyc11g069210.2 Solanum lycopersicum HOM05D008415 ORTHO05D010601 3.0e-17 92.4 118 47.5
CsaV3_6G021730 Cucumis sativus L. HOM05D008415 ORTHO05D010601 3.9e-17 92.0 138 39.9
CANSAT54G1687 Cannabis sativa HOM05D008415 ORTHO05D010601 3.3e-16 89.0 94 52.1
Migut.D02196 Erythranthe guttata HOM05D008415 ORTHO05D010601 3.3e-16 89.0 126 44.4
Sopen11g027940 Solanum pennellii HOM05D008415 ORTHO05D010601 3.3e-16 89.0 116 47.4
MSTRG.18650 Avicennia marina HOM05D008415 ORTHO05D010601 4.3e-16 88.6 91 49.5
CAN.G631.8 Capsicum annuum HOM05D008415 ORTHO05D010601 5.6e-16 88.2 167 38.3
GSVIVG01025161001 Vitis vinifera HOM05D008415 ORTHO05D010601 7.3e-16 87.8 115 45.2
Cc01_g11390 Coffea canephora HOM05D008415 ORTHO05D010601 1.3e-15 87.0 101 51.5
CSS0041118 Camellia sinensis var. sinensis HOM05D008415 ORTHO05D010601 4.8e-15 85.1 99 44.4
HanXRQChr14g0445691 Helianthus annuus HOM05D008415 ORTHO05D010601 4.8e-15 85.1 105 49.5
SalBow3G0300 Salvia bowleyana HOM05D008415 ORTHO05D010601 1.4e-14 83.6 121 42.1
Phvul.011G073700 Phaseolus vulgaris HOM05D008415 ORTHO05D010601 2.4e-14 82.8 77 57.1
ECA238G2082 Erigeron canadensis HOM05D008415 ORTHO05D010601 6.9e-14 81.3 121 43.0
unitig_46.g18232 Utricularia gibba HOM05D008415 ORTHO05D010601 2.6e-13 79.3 88 48.9
CSS0005479 Camellia sinensis var. sinensis HOM05D008415 ORTHO05D010601 5.8e-13 78.2 76 48.7
PGR119G0199 Punica granatum HOM05D008415 ORTHO05D010601 7.6e-13 77.8 92 44.6
Lsat_1_v5_gn_2_98161 Lactuca sativa HOM05D008415 ORTHO05D010601 9.9e-13 77.4 98 45.9
Aqoxy2G01080 Aquilegia oxysepala HOM05D008415 ORTHO05D010601 4.9e-12 75.1 99 43.4
Os03g0288900 Oryza sativa ssp. japonica HOM05D008415 ORTHO05D010601 4.2e-11 72.0 101 42.6
Potri.016G129250 Populus trichocarpa HOM05D008415 ORTHO05D010601 1.5e-08 63.5 154 32.5
ECA232G4425 Erigeron canadensis HOM05D005535 ORTHO05D006753 9.6e-08 60.8 86 40.7
Hma1.2p1_1617F.1_g293810 Hydrangea macrophylla HOM05D005535 ORTHO05D006753 1.3e-07 60.5 71 46.5
Dinv19929 Davidia involucrata HOM05D005535 ORTHO05D006753 2.8e-07 59.3 86 39.5
Gorai.008G191600 Gossypium raimondii HOM05D005535 ORTHO05D006753 2.8e-07 59.3 121 37.2
SEGI_01090 Sequoiadendron giganteum HOM05D005535 ORTHO05D006753 2.8e-07 59.3 59 49.2
TAR371G0260 Trochodendron aralioides HOM05D005535 ORTHO05D006753 2.8e-07 59.3 107 35.5
Zm00001eb386190 Zea mays HOM05D005535 ORTHO05D006753 3.7e-07 58.9 95 40.0
Gohir.A12G175600 Gossypium hirsutum HOM05D005535 ORTHO05D006753 4.8e-07 58.5 124 31.5
HPP92_024074 Vanilla planifolia HOM05D005535 ORTHO05D006753 4.8e-07 58.5 118 33.9
CAN.G628.33 Capsicum annuum HOM05D005535 ORTHO05D006753 8.1e-07 57.8 95 33.7
Gohir.D12G178800 Gossypium hirsutum HOM05D005535 ORTHO05D006753 8.1e-07 57.8 121 37.2
PGSC0003DMG400033073 Solanum tuberosum HOM05D005535 ORTHO05D006753 8.1e-07 57.8 126 31.7
Thecc.03G081300 Theobroma cacao HOM05D005535 ORTHO05D006753 8.1e-07 57.8 125 32.0
Sopen06g027240 Solanum pennellii HOM05D005535 ORTHO05D006753 1.1e-06 57.4 126 31.0
CiPaw.12G015700 Carya illinoinensis HOM05D005535 ORTHO05D006753 1.4e-06 57.0 105 35.2
Lalb_Chr13g0303381 Lupinus albus HOM05D005535 ORTHO05D006753 1.4e-06 57.0 90 34.4
MBI01_g12912_MAGBIO Magnolia biondii HOM05D005535 ORTHO05D006753 1.4e-06 57.0 83 39.8
HanXRQChr09g0271071 Helianthus annuus HOM05D005535 ORTHO05D006753 1.8e-06 56.6 87 40.2
Hma1.2p1_0104F.1_g050150 Hydrangea macrophylla HOM05D005535 ORTHO05D006753 1.8e-06 56.6 126 31.7
Lsat_1_v5_gn_5_19040 Lactuca sativa HOM05D005535 ORTHO05D006753 2.4e-06 56.2 64 45.3
Oeu022201.1 Olea europaea HOM05D005535 ORTHO05D006753 2.4e-06 56.2 101 37.6
Aqoxy3G00718 Aquilegia oxysepala HOM05D005535 ORTHO05D006753 3.1e-06 55.8 60 43.3
Glyma.05G028700 Glycine max HOM05D005535 ORTHO05D006753 3.1e-06 55.8 96 38.5
Os06g0589500 Oryza sativa ssp. japonica HOM05D005535 ORTHO05D006753 3.1e-06 55.8 92 34.8
TAR629G1161 Trochodendron aralioides HOM05D005535 ORTHO05D006753 3.1e-06 55.8 81 40.7
Duzib205G0302 Durio zibethinus HOM05D005535 ORTHO05D006753 4.0e-06 55.5 95 33.7
Manes.06G095400 Manihot esculenta HOM05D005535 ORTHO05D006753 4.0e-06 55.5 117 30.8
TWI60G0583 Tripterygium wilfordii HOM05D005535 ORTHO05D006753 4.0e-06 55.5 123 33.3
Actinidia34981 Actinidia chinensis HOM05D005535 ORTHO05D006753 5.3e-06 55.1 90 38.9
arahy.Tifrunner.gnm1.ann1.WGP01G Arachis hypogaea HOM05D005535 ORTHO05D006753 5.3e-06 55.1 86 33.7
PSO478G1818 Papaver somniferum HOM05D005535 ORTHO05D006753 5.3e-06 55.1 58 48.3
Rhsim08G0158400 Rhododendron simsii HOM05D005535 ORTHO05D006753 5.3e-06 55.1 86 34.9
PSO017G0680 Papaver somniferum HOM05D005535 ORTHO05D006753 6.9e-06 54.7 58 48.3
Hund09363 Selenicereus undatus HOM05D005535 ORTHO05D006753 6.9e-06 54.7 117 30.8
Atru.chr9.2302 Acer truncatum HOM05D005535 ORTHO05D006753 9.0e-06 54.3 101 36.6
Actinidia04914 Actinidia chinensis HOM05D005535 ORTHO05D006753 9.0e-06 54.3 80 36.2
Duzib084G1387 Durio zibethinus HOM05D005535 ORTHO05D006753 9.0e-06 54.3 121 29.8
Peaxi162Scf00013g00129 Petunia axillaris HOM05D005535 ORTHO05D006753 9.0e-06 54.3 95 32.6
Solyc06g070970.3 Solanum lycopersicum HOM05D005535 ORTHO05D006753 9.0e-06 54.3 126 31.0
TWI34G0031 Tripterygium wilfordii HOM05D005535 ORTHO05D006753 9.0e-06 54.3 87 40.2


User provided reference genes

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