Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G15471 Trifolium pratense HOM05D000056 ORTHO05D010126 6.2e-88 327.4 162 100.0
TPR.G40199 Trifolium pratense HOM05D000056 ORTHO05D010126 1.3e-56 223.4 167 70.1
TPR.G27212 Trifolium pratense HOM05D035450 ORTHO05D010126 1.5e-54 216.5 164 70.1
Medtr0067s0010 Medicago truncatula HOM05D000056 ORTHO05D010126 6.9e-47 191.0 170 62.4
Medtr3g466740 Medicago truncatula HOM05D000056 ORTHO05D010126 4.5e-46 188.3 177 59.9
Glyma.17G238300 Glycine max HOM05D000056 ORTHO05D010126 1.0e-29 134.0 170 44.7
Psat5g149520 Pisum sativum HOM05D000056 ORTHO05D010126 8.8e-26 120.9 115 58.3
TPR.G40328 Trifolium pratense HOM05D000056 ORTHO05D010126 8.8e-26 120.9 96 66.7
arahy.Tifrunner.gnm1.ann1.5BS7U5 Arachis hypogaea HOM05D000056 ORTHO05D010126 4.8e-24 115.2 120 48.3
arahy.Tifrunner.gnm1.ann1.DM2C02 Arachis hypogaea HOM05D000056 ORTHO05D010126 4.8e-24 115.2 120 48.3
Medtr7g068070 Medicago truncatula HOM05D000056 ORTHO05D010126 1.7e-21 106.7 192 38.0
TPR.G8142 Trifolium pratense HOM05D000056 ORTHO05D010126 4.2e-20 102.1 157 38.2
Glyma.01G115600 Glycine max HOM05D000056 ORTHO05D010126 7.2e-20 101.3 152 40.1
Medtr7g067750 Medicago truncatula HOM05D000056 ORTHO05D010126 7.2e-20 101.3 178 36.5
Medtr4g015450 Medicago truncatula HOM05D003216 ORTHO05D010126 9.4e-20 100.9 157 38.9
arahy.Tifrunner.gnm1.ann1.SBB7A0 Arachis hypogaea HOM05D000056 ORTHO05D010126 6.1e-19 98.2 138 42.0
TPR.G17803 Trifolium pratense HOM05D000056 ORTHO05D010126 1.0e-18 97.4 136 41.2
arahy.Tifrunner.gnm1.ann1.A9SYPB Arachis hypogaea HOM05D000056 ORTHO05D010126 1.4e-18 97.1 143 39.9
TPR.G17824 Trifolium pratense HOM05D000056 ORTHO05D010126 4.0e-18 95.5 136 41.9
arahy.Tifrunner.gnm1.ann1.UDT38R Arachis hypogaea HOM05D000056 ORTHO05D010126 5.2e-18 95.1 145 40.7
arahy.Tifrunner.gnm1.ann1.Y78IXY Arachis hypogaea HOM05D000056 ORTHO05D010126 6.8e-18 94.7 145 40.7
Medtr7g067660 Medicago truncatula HOM05D000056 ORTHO05D010126 8.8e-18 94.4 139 37.4
Psat7g246280 Pisum sativum HOM05D000056 ORTHO05D010126 8.8e-18 94.4 135 40.7
Medtr7g067880 Medicago truncatula HOM05D000056 ORTHO05D010126 1.2e-17 94.0 199 32.2
Medtr7g067970 Medicago truncatula HOM05D000056 ORTHO05D010126 3.4e-17 92.4 111 44.1
TPR.G24628 Trifolium pratense HOM05D000056 ORTHO05D010126 5.7e-17 91.7 137 40.1
Psat3g129960 Pisum sativum HOM05D000056 ORTHO05D010126 9.8e-17 90.9 189 32.8
TPR.G8136 Trifolium pratense HOM05D000056 ORTHO05D010126 1.3e-16 90.5 198 31.3
Glyma.01G114400 Glycine max HOM05D000056 ORTHO05D010126 1.7e-16 90.1 140 36.4
Medtr7g067600 Medicago truncatula HOM05D000056 ORTHO05D010126 2.2e-16 89.7 107 41.1
Medtr7g067300 Medicago truncatula HOM05D000056 ORTHO05D010126 2.8e-16 89.4 183 33.3
arahy.Tifrunner.gnm1.ann1.GDD7VZ Arachis hypogaea HOM05D000056 ORTHO05D010126 3.7e-16 89.0 172 32.6
TPR.G27474 Trifolium pratense HOM05D000056 ORTHO05D010126 3.7e-16 89.0 134 39.6
VMungo0331G0587 Vigna mungo HOM05D000056 ORTHO05D010126 8.3e-16 87.8 144 37.5
Medtr1g040690 Medicago truncatula HOM05D000056 ORTHO05D010126 1.1e-15 87.4 143 37.8
VMungo0331G2021 Vigna mungo HOM05D000056 ORTHO05D010126 1.1e-15 87.4 138 36.2
Medtr7g068160 Medicago truncatula HOM05D000056 ORTHO05D010126 1.4e-15 87.0 210 31.0
Medtr4g015410 Medicago truncatula HOM05D000056 ORTHO05D010126 2.4e-15 86.3 127 38.6
Medtr7g067940 Medicago truncatula HOM05D000056 ORTHO05D010126 4.1e-15 85.5 133 39.1
Phvul.010G003300 Phaseolus vulgaris HOM05D000056 ORTHO05D010126 4.1e-15 85.5 140 35.0
TPR.G13335 Trifolium pratense HOM05D000056 ORTHO05D010126 9.1e-15 84.3 135 37.8
Glyma.07G147200 Glycine max HOM05D000056 ORTHO05D010126 1.2e-14 84.0 149 35.6
Phvul.010G002600 Phaseolus vulgaris HOM05D000056 ORTHO05D010126 1.2e-14 84.0 146 35.6
arahy.Tifrunner.gnm1.ann1.4PY23S Arachis hypogaea HOM05D000056 ORTHO05D010126 1.6e-14 83.6 176 31.2
Phvul.008G106100 Phaseolus vulgaris HOM05D000056 ORTHO05D010126 1.6e-14 83.6 149 34.9
VMungo1383G0202 Vigna mungo HOM05D000056 ORTHO05D010126 2.0e-14 83.2 149 34.2
Glyma.01G115700 Glycine max HOM05D000056 ORTHO05D010126 3.5e-14 82.4 163 35.0
Glyma.03G063400 Glycine max HOM05D000056 ORTHO05D010126 3.5e-14 82.4 138 35.5
TPR.G29784 Trifolium pratense HOM05D000056 ORTHO05D010126 3.5e-14 82.4 143 35.0
Phvul.010G002700 Phaseolus vulgaris HOM05D000056 ORTHO05D010126 4.5e-14 82.0 181 36.5
Glyma.03G061200 Glycine max HOM05D000056 ORTHO05D010126 1.3e-13 80.5 143 41.3
Psat7g246560 Pisum sativum HOM05D000056 ORTHO05D010126 1.7e-13 80.1 135 37.0
Glyma.01G114600 Glycine max HOM05D000056 ORTHO05D010126 2.9e-13 79.3 104 46.2
Medtr7g067990 Medicago truncatula HOM05D000056 ORTHO05D010126 3.8e-13 79.0 188 30.9
Lalb_Chr03g0043121 Lupinus albus HOM05D000056 ORTHO05D010126 5.0e-13 78.6 150 34.0
Medtr1g038270 Medicago truncatula HOM05D000056 ORTHO05D010126 8.5e-13 77.8 145 35.9
arahy.Tifrunner.gnm1.ann1.4NCV9J Arachis hypogaea HOM05D000056 ORTHO05D010126 1.9e-12 76.6 163 31.3
VMungo0331G1171 Vigna mungo HOM05D000056 ORTHO05D010126 1.9e-12 76.6 168 33.9
Sabra10G0111300 Salix brachista HOM05D000056 ORTHO05D000019 2.8e-08 62.8 140 30.7
Ca_20307_v3 Cicer arietinum L. HOM05D000056 ORTHO05D010126 4.1e-07 58.9 69 43.5
Hma1.2p1_0017F.1_g011690 Hydrangea macrophylla HOM05D000056 ORTHO05D000019 7.0e-07 58.2 125 34.4


User provided reference genes

Program Settings