Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G15450 Trifolium pratense HOM05D003842 ORTHO05D004436 1.9e-66 255.8 137 100.0
Psat3g040280 Pisum sativum HOM05D003842 ORTHO05D004436 1.4e-45 186.4 141 77.3
Ca_08873_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 8.8e-43 177.2 103 92.2
Medtr7g102430 Medicago truncatula HOM05D003842 ORTHO05D004436 1.7e-41 172.9 103 91.3
Lj1g0002569 Lotus japonicus HOM05D003842 ORTHO05D004436 3.1e-40 168.7 102 86.3
Lalb_Chr20g0112381 Lupinus albus HOM05D003842 ORTHO05D004436 3.4e-39 165.2 103 84.5
Phvul.001G181800 Phaseolus vulgaris HOM05D003842 ORTHO05D004436 3.4e-39 165.2 103 83.5
Glyma.19G186900 Glycine max HOM05D003842 ORTHO05D004436 4.5e-39 164.9 103 83.5
arahy.Tifrunner.gnm1.ann1.CVPH5H Arachis hypogaea HOM05D003842 ORTHO05D004436 5.5e-37 157.9 103 80.6
arahy.Tifrunner.gnm1.ann1.BQYP5G Arachis hypogaea HOM05D003842 ORTHO05D004436 1.2e-36 156.8 130 70.0
Dinv35821 Davidia involucrata HOM05D003842 ORTHO05D004436 6.1e-36 154.5 105 78.1
CiPaw.09G003300 Carya illinoinensis HOM05D003842 ORTHO05D004436 7.9e-36 154.1 107 76.6
Ah.08g211380 Amaranthus hybridus HOM05D003842 ORTHO05D004436 3.0e-35 152.1 105 73.3
THA.LOC104818591 Tarenaya hassleriana HOM05D003842 ORTHO05D004436 3.9e-35 151.8 105 74.3
COL.COLO4_26897 Corchorus olitorius HOM05D003842 ORTHO05D004436 8.8e-35 150.6 108 72.2
Ciclev10024523m.g Citrus clementina HOM05D003842 ORTHO05D004436 1.5e-34 149.8 105 71.4
Atru.chr8.1723 Acer truncatum HOM05D003842 ORTHO05D004436 2.0e-34 149.4 105 74.3
Atru.chr8.1733 Acer truncatum HOM05D003842 ORTHO05D004436 2.0e-34 149.4 105 74.3
EL10Ac7g16718 Beta vulgaris HOM05D003842 ORTHO05D004436 2.0e-34 149.4 105 73.3
Cpa.g.sc5.152 Carica papaya HOM05D003842 ORTHO05D004436 2.0e-34 149.4 103 73.8
Duzib093G0118 Durio zibethinus HOM05D003842 ORTHO05D004436 2.6e-34 149.1 108 70.4
AUR62036532 Chenopodium quinoa HOM05D003842 ORTHO05D004436 3.3e-34 148.7 105 71.4
Sc20g0005740 Simmondsia chinensis HOM05D003842 ORTHO05D004436 3.3e-34 148.7 105 72.4
Manes.08G013802 Manihot esculenta HOM05D003842 ORTHO05D004436 4.4e-34 148.3 105 73.3
Haze_19462 Corylus avellana HOM05D003842 ORTHO05D004436 5.7e-34 147.9 105 72.4
Thecc.05G072900 Theobroma cacao HOM05D003842 ORTHO05D004436 5.7e-34 147.9 108 69.4
Cfa016461 Carpinus fangiana HOM05D003842 ORTHO05D004436 9.7e-34 147.1 105 72.4
MD12G1104900 Malus domestica HOM05D003842 ORTHO05D004436 1.3e-33 146.7 105 71.4
TAR633G0529 Trochodendron aralioides HOM05D003842 ORTHO05D004436 1.3e-33 146.7 105 71.4
AUR62042272 Chenopodium quinoa HOM05D003842 ORTHO05D004436 1.7e-33 146.4 105 71.4
Duzib106G1778 Durio zibethinus HOM05D003842 ORTHO05D004436 2.2e-33 146.0 108 69.4
Sed0026042 Sechium edule HOM05D003842 ORTHO05D004436 2.2e-33 146.0 105 71.4
CANSAT80G2389 Cannabis sativa HOM05D003842 ORTHO05D004436 2.8e-33 145.6 105 70.5
Nn6g35197 Nelumbo nucifera HOM05D003842 ORTHO05D004436 4.8e-33 144.8 105 69.5
Aa31LG5G22020 Aethionema arabicum HOM05D003842 ORTHO05D004436 6.3e-33 144.4 107 71.0
Gohir.D11G342350 Gossypium hirsutum HOM05D003842 ORTHO05D004436 6.3e-33 144.4 108 68.5
Gorai.007G372400 Gossypium raimondii HOM05D003842 ORTHO05D004436 6.3e-33 144.4 108 68.5
Eucgr.K02432 Eucalyptus grandis HOM05D003842 ORTHO05D004436 1.1e-32 143.7 105 71.4
CsaV3_6G040160 Cucumis sativus L. HOM05D003842 ORTHO05D004436 1.4e-32 143.3 105 70.5
Carub.0004s1865 Capsella rubella HOM05D003842 ORTHO05D004436 3.1e-32 142.1 107 71.0
MELO3C024492.2 Cucumis melo HOM05D003842 ORTHO05D004436 3.1e-32 142.1 105 69.5
FAN05G4099 Fragaria x ananassa HOM05D003842 ORTHO05D004436 3.1e-32 142.1 105 69.5
QL07p041738 Quercus lobata HOM05D003842 ORTHO05D004436 3.1e-32 142.1 105 69.5
Sabra06G0095000 Salix brachista HOM05D003842 ORTHO05D004436 3.1e-32 142.1 105 72.4
FvH4_6g17010 Fragaria vesca HOM05D003842 ORTHO05D004436 4.1e-32 141.7 105 69.5
FAN05G0072 Fragaria x ananassa HOM05D003842 ORTHO05D004436 4.1e-32 141.7 105 69.5
A04p28120 Brassica napus HOM05D003842 ORTHO05D004436 5.3e-32 141.4 107 71.0
BolC4t28040H Brassica oleracea HOM05D003842 ORTHO05D004436 5.3e-32 141.4 107 71.0
FAN14G4083 Fragaria x ananassa HOM05D003842 ORTHO05D004436 5.3e-32 141.4 107 70.1
Hma1.2p1_0547F.1_g176420 Hydrangea macrophylla HOM05D003842 ORTHO05D004436 5.3e-32 141.4 105 68.6
Potri.006G120800 Populus trichocarpa HOM05D003842 ORTHO05D004436 7.0e-32 141.0 105 71.4
AT2G36810 Arabidopsis thaliana HOM05D003842 ORTHO05D004436 9.1e-32 140.6 107 70.1
C04p65510 Brassica napus HOM05D003842 ORTHO05D004436 9.1e-32 140.6 107 71.0
BraA04t18297Z Brassica rapa HOM05D003842 ORTHO05D004436 9.1e-32 140.6 107 71.0
FAN02G1267 Fragaria x ananassa HOM05D003842 ORTHO05D004436 9.1e-32 140.6 105 69.5
Sp4g19070 Schrenkiella parvula HOM05D003842 ORTHO05D004436 9.1e-32 140.6 107 70.1
Actinidia26647 Actinidia chinensis HOM05D003842 ORTHO05D004436 1.2e-31 140.2 105 68.6
FAN09G2316 Fragaria x ananassa HOM05D003842 ORTHO05D004436 1.2e-31 140.2 105 69.5
RcHm_v2.0_Chr3g0471001 Rosa chinensis HOM05D003842 ORTHO05D004436 1.2e-31 140.2 107 69.2
BcaC02g07579 Brassica carinata HOM05D003842 ORTHO05D004436 1.5e-31 139.8 107 70.1
AL4G33000 Arabidopsis lyrata HOM05D003842 ORTHO05D004436 2.6e-31 139.0 107 69.2
CSS0021824 Camellia sinensis var. sinensis HOM05D003842 ORTHO05D004436 2.6e-31 139.0 105 69.5
CSS0023266 Camellia sinensis var. sinensis HOM05D003842 ORTHO05D004436 2.6e-31 139.0 105 69.5
TWI74G0820 Tripterygium wilfordii HOM05D003842 ORTHO05D004436 3.5e-31 138.7 107 70.1
GSVIVG01033696001 Vitis vinifera HOM05D003842 ORTHO05D004436 5.9e-31 137.9 105 67.6
Actinidia28923 Actinidia chinensis HOM05D003842 ORTHO05D004436 7.7e-31 137.5 105 67.6
vmacro07325 Vaccinium macrocarpon HOM05D003842 ORTHO05D004436 1.0e-30 137.1 106 69.8
PSO063G4107 Papaver somniferum HOM05D003842 ORTHO05D004436 1.3e-30 136.7 105 66.7
Prupe.7G124700 Prunus persica HOM05D003842 ORTHO05D004436 1.3e-30 136.7 105 67.6
PSO339G3623 Papaver somniferum HOM05D003842 ORTHO05D004436 2.2e-30 136.0 105 65.7
PGR142G1271 Punica granatum HOM05D003842 ORTHO05D004436 1.1e-29 133.7 105 65.7
Migut.L01724 Erythranthe guttata HOM05D003842 ORTHO05D004436 1.4e-29 133.3 105 64.8
HanXRQChr13g0400661 Helianthus annuus HOM05D003842 ORTHO05D004436 1.4e-29 133.3 102 67.6
Aqoxy1G01066 Aquilegia oxysepala HOM05D003842 ORTHO05D004436 3.2e-29 132.1 105 64.8
MSTRG.26674 Avicennia marina HOM05D003842 ORTHO05D004436 4.2e-29 131.7 123 56.9
ECA233G4297 Erigeron canadensis HOM05D003842 ORTHO05D004436 4.2e-29 131.7 105 67.6
Cc06_g04620 Coffea canephora HOM05D003842 ORTHO05D004436 5.5e-29 131.3 105 62.9
Ca_08928_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 7.2e-29 131.0 72 93.1
SGA_v2.0_scaffold224G42922 Striga asiatica HOM05D003842 ORTHO05D004436 9.4e-29 130.6 106 65.1
Solyc09g008490.4 Solanum lycopersicum HOM05D003842 ORTHO05D004436 1.6e-28 129.8 105 61.9
Sopen09g003320 Solanum pennellii HOM05D003842 ORTHO05D004436 1.6e-28 129.8 105 61.9
CAN.G1038.13 Capsicum annuum HOM05D003842 ORTHO05D004436 6.1e-28 127.9 105 61.0
ATR0043G024 Amborella trichopoda HOM05D003842 ORTHO05D004436 3.9e-27 125.2 98 61.2
Lsat_1_v5_gn_6_28640 Lactuca sativa HOM05D003842 ORTHO05D004436 1.3e-25 120.2 93 65.6
ClCG04G009540 Citrullus lanatus HOM05D003842 ORTHO05D004436 2.8e-25 119.0 118 56.8
Zm00001eb003810 Zea mays HOM05D003842 ORTHO05D004436 2.8e-25 119.0 108 56.5
Gohir.A11G323300 Gossypium hirsutum HOM05D003842 ORTHO05D004436 1.2e-23 113.6 72 72.2
Nitab4.5_0002535g0020 Nicotiana tabacum HOM05D003842 ORTHO05D004436 2.6e-23 112.5 101 55.4
Thhalv10016131m.g Eutrema salsugineum HOM05D003842 ORTHO05D004436 3.8e-22 108.6 79 72.2
HPP92_022597 Vanilla planifolia HOM05D003842 ORTHO05D004436 1.6e-20 103.2 101 55.4
SEGI_24462 Sequoiadendron giganteum HOM05D003842 ORTHO05D004436 1.4e-16 90.1 98 48.0
DCAR_020802 Daucus carota HOM05D003842 ORTHO05D004436 3.6e-12 75.5 113 42.5
Lj3A992G55 Lonicera japonica HOM05D003842 ORTHO05D004436 1.0e-11 73.9 107 47.7
Gohir.A09G144350 Gossypium hirsutum HOM05D003842 ORTHO05D004436 3.7e-09 65.5 40 77.5
Gorai.006G160800 Gossypium raimondii HOM05D003842 ORTHO05D004436 3.7e-09 65.5 40 77.5
Mapoly0008s0039 Marchantia polymorpha HOM05D003842 ORTHO05D004436 3.1e-08 62.4 118 33.9
Rhsim03G0088500 Rhododendron simsii HOM05D003842 ORTHO05D004436 1.7e-06 56.6 40 72.5


User provided reference genes

Program Settings