Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 7.7e-141 503.8 260 100.0
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 9.5e-123 443.7 260 89.6
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 1.8e-121 439.5 263 89.4
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 5.2e-113 411.4 268 82.1
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 3.5e-101 372.1 266 77.4
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 4.9e-95 351.7 261 75.1
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 7.1e-94 347.8 263 74.9
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 4.6e-93 345.1 268 73.5
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 3.0e-92 342.4 273 71.4
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 1.9e-91 339.7 272 71.3
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 5.6e-91 338.2 271 69.4
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 3.7e-90 335.5 266 70.3
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 3.7e-90 335.5 270 71.9
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 1.4e-89 333.6 276 68.1
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 1.8e-89 333.2 276 67.8
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 6.9e-89 331.3 278 69.8
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 1.5e-88 330.1 262 71.0
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 1.5e-88 330.1 272 69.5
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 2.6e-88 329.3 275 68.0
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 2.6e-88 329.3 278 69.1
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 1.7e-87 326.6 273 67.8
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 2.2e-87 326.2 267 67.8
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 2.9e-87 325.9 266 69.2
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 2.9e-87 325.9 273 67.8
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 2.9e-87 325.9 272 66.2
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 2.9e-87 325.9 280 67.5
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 4.9e-87 325.1 246 71.5
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 6.4e-87 324.7 275 68.4
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 6.4e-87 324.7 271 69.7
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 1.1e-86 323.9 269 67.7
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 2.4e-86 322.8 199 82.9
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 9.3e-86 320.9 234 76.5
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 9.3e-86 320.9 198 83.8
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 9.3e-86 320.9 282 65.6
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 9.3e-86 320.9 272 65.4
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 9.3e-86 320.9 264 68.9
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 1.2e-85 320.5 286 65.7
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 1.6e-85 320.1 194 85.1
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 2.7e-85 319.3 194 85.1
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 2.7e-85 319.3 215 76.7
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 3.5e-85 318.9 263 69.2
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 4.6e-85 318.5 203 84.2
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 4.6e-85 318.5 268 69.8
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 4.6e-85 318.5 266 66.9
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 6.0e-85 318.2 224 77.2
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 6.0e-85 318.2 282 64.9
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 1.0e-84 317.4 251 69.7
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 1.3e-84 317.0 203 83.7
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 1.3e-84 317.0 270 67.8
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 1.3e-84 317.0 266 68.8
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 1.8e-84 316.6 265 68.7
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 2.3e-84 316.2 268 67.9
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 3.0e-84 315.8 249 71.1
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 3.0e-84 315.8 203 83.3
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 3.0e-84 315.8 187 86.6
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 5.1e-84 315.1 267 66.7
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 5.1e-84 315.1 224 75.9
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 5.1e-84 315.1 266 68.4
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 5.1e-84 315.1 270 67.4
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 1.1e-83 313.9 206 79.1
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 1.5e-83 313.5 213 77.0
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 1.5e-83 313.5 266 69.2
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 1.9e-83 313.2 268 66.8
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 2.5e-83 312.8 198 81.3
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 4.3e-83 312.0 214 76.2
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 9.6e-83 310.8 217 75.6
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 1.6e-82 310.1 214 75.7
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 1.6e-82 310.1 263 66.5
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 2.1e-82 309.7 217 75.6
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 2.1e-82 309.7 263 65.8
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 2.1e-82 309.7 184 87.0
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 3.7e-82 308.9 218 74.8
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 6.2e-82 308.1 214 77.1
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 6.2e-82 308.1 217 75.1
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 6.2e-82 308.1 215 76.3
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 6.2e-82 308.1 217 75.1
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 8.2e-82 307.8 263 65.8
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 1.1e-81 307.4 214 74.8
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 2.4e-81 306.2 200 79.5
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 3.1e-81 305.8 197 80.7
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 4.0e-81 305.4 217 75.1
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 5.3e-81 305.1 215 75.3
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 9.0e-81 304.3 261 64.4
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 2.0e-80 303.1 184 84.8
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 2.6e-80 302.8 257 64.6
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 4.5e-80 302.0 293 60.4
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 2.9e-79 299.3 202 77.2
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 1.9e-78 296.6 268 64.9
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 2.5e-78 296.2 235 68.9
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 2.5e-78 296.2 266 64.7
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 5.5e-78 295.0 200 80.0
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 9.3e-78 294.3 185 82.7
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 9.3e-78 294.3 187 79.7
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 1.6e-77 293.5 187 79.1
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 4.6e-77 292.0 268 62.7
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 7.9e-77 291.2 272 62.5
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 2.8e-74 282.7 223 68.6
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 6.3e-74 281.6 185 78.4
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 1.3e-71 273.9 200 68.5
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 7.9e-69 264.6 260 60.0
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 5.7e-67 258.5 232 63.8
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 1.3e-66 257.3 188 67.0
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 1.4e-65 253.8 179 76.0
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 1.8e-65 253.4 198 72.7
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 3.4e-64 249.2 199 63.3
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 7.9e-61 238.0 196 60.7
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 7.2e-54 214.9 143 81.8
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 6.1e-53 211.8 272 51.1
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 3.7e-50 202.6 166 69.3
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 4.8e-50 202.2 203 60.1
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 5.5e-46 188.7 179 58.7
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 1.8e-44 183.7 183 50.3
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 2.3e-44 183.3 192 47.9
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 5.2e-44 182.2 134 70.1
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 5.2e-44 182.2 108 83.3
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 1.6e-37 160.6 108 70.4
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 6.8e-36 155.2 221 41.2
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 8.0e-29 131.7 92 79.3
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 5.9e-24 115.5 82 70.7
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 5.0e-15 85.9 71 66.2
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 6.2e-13 79.0 48 79.2
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 8.9e-12 75.1 105 50.5
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 6.4e-10 68.9 44 75.0
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 1.2e-08 64.7 43 74.4
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 1.1e-06 58.2 78 50.0


User provided reference genes

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