Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G15319 Trifolium pratense HOM05D000037 ORTHO05D012065 2.2e-66 255.4 120 100.0
TPR.G15316 Trifolium pratense HOM05D000037 ORTHO05D000150 5.7e-22 107.8 65 75.4
Medtr2g058670 Medicago truncatula HOM05D000037 ORTHO05D000150 1.7e-13 79.7 65 56.9
Medtr2g058640 Medicago truncatula HOM05D000037 ORTHO05D000150 4.1e-12 75.1 69 50.7
Ca_02707_v3 Cicer arietinum L. HOM05D000037 ORTHO05D000150 5.0e-10 68.2 46 65.2
Medtr2g058840 Medicago truncatula HOM05D000037 ORTHO05D000150 5.0e-10 68.2 55 54.5
Psat0s10625g0040 Pisum sativum HOM05D000037 ORTHO05D000150 4.2e-09 65.1 50 52.0
Psat0s8241g0040 Pisum sativum HOM05D000037 ORTHO05D000150 4.2e-09 65.1 50 52.0
arahy.Tifrunner.gnm1.ann1.X3CF1X Arachis hypogaea HOM05D000037 ORTHO05D000150 7.2e-09 64.3 51 51.0
TPR.G8841 Trifolium pratense HOM05D000037 ORTHO05D012065 9.5e-09 63.9 38 78.9
arahy.Tifrunner.gnm1.ann1.YI4Y80 Arachis hypogaea HOM05D000037 ORTHO05D000150 1.6e-08 63.2 57 49.1
Psat0s2304g0040 Pisum sativum HOM05D000037 ORTHO05D000150 1.6e-08 63.2 67 47.8
TPR.G27045 Trifolium pratense HOM05D000037 ORTHO05D000150 2.1e-08 62.8 53 56.6
Psat1g029080 Pisum sativum HOM05D000037 ORTHO05D012065 6.1e-08 61.2 56 53.6
Glyma.06G207300 Glycine max HOM05D000037 ORTHO05D000150 1.0e-07 60.5 50 54.0
Psat1g028320 Pisum sativum HOM05D000037 ORTHO05D000150 1.4e-07 60.1 50 48.0
Lalb_Chr17g0349161 Lupinus albus HOM05D000037 ORTHO05D000150 2.3e-07 59.3 50 50.0
Lalb_Chr17g0349171 Lupinus albus HOM05D000037 ORTHO05D000150 2.3e-07 59.3 50 50.0
Lalb_Chr17g0349181 Lupinus albus HOM05D000037 ORTHO05D000150 2.3e-07 59.3 50 50.0
Lalb_Chr17g0349191 Lupinus albus HOM05D000037 ORTHO05D000150 2.3e-07 59.3 50 50.0
Lalb_Chr17g0349201 Lupinus albus HOM05D000037 ORTHO05D000150 2.3e-07 59.3 50 50.0
Lalb_Chr17g0349211 Lupinus albus HOM05D000037 ORTHO05D000150 2.3e-07 59.3 50 50.0
Lalb_Chr17g0349221 Lupinus albus HOM05D000037 ORTHO05D000150 2.3e-07 59.3 50 50.0
Lalb_Chr17g0349231 Lupinus albus HOM05D000037 ORTHO05D000150 2.3e-07 59.3 50 50.0
Lj6g0012828 Lotus japonicus HOM05D000037 ORTHO05D000150 4.0e-07 58.5 51 54.9
Glyma.06G203000 Glycine max HOM05D000037 ORTHO05D000150 6.8e-07 57.8 50 52.0
Sabra19G0077700 Salix brachista HOM05D000037 ORTHO05D000150 8.9e-07 57.4 55 49.1
Sabra19G0077900 Salix brachista HOM05D000037 ORTHO05D000150 8.9e-07 57.4 55 49.1
Sabra19G0078100 Salix brachista HOM05D000037 ORTHO05D000150 8.9e-07 57.4 55 49.1
Sabra19G0085800 Salix brachista HOM05D000037 ORTHO05D000150 8.9e-07 57.4 55 49.1
arahy.Tifrunner.gnm1.ann1.G8HZGG Arachis hypogaea HOM05D000037 ORTHO05D000150 1.2e-06 57.0 51 51.0
arahy.Tifrunner.gnm1.ann1.VR3HW8 Arachis hypogaea HOM05D000037 ORTHO05D000150 1.2e-06 57.0 51 51.0
Ca_29841_v3 Cicer arietinum L. HOM05D000037 ORTHO05D000150 1.5e-06 56.6 55 45.5
Lalb_Chr01g0019381 Lupinus albus HOM05D000037 ORTHO05D000150 1.5e-06 56.6 46 45.7
Lalb_Chr01g0019391 Lupinus albus HOM05D000037 ORTHO05D000150 1.5e-06 56.6 46 45.7
Glyma.04G143200 Glycine max HOM05D000037 ORTHO05D000150 2.0e-06 56.2 50 50.0
Glyma.04G157500 Glycine max HOM05D000037 ORTHO05D000150 2.0e-06 56.2 50 50.0
Glyma.04G157600 Glycine max HOM05D000037 ORTHO05D000150 2.0e-06 56.2 50 50.0
Glyma.04G157700 Glycine max HOM05D000037 ORTHO05D000150 2.0e-06 56.2 50 50.0
Lj1g0009934 Lotus japonicus HOM05D000037 ORTHO05D000150 2.0e-06 56.2 50 52.0
Lj1g0025653 Lotus japonicus HOM05D000037 ORTHO05D000150 2.0e-06 56.2 50 52.0
GSVIVG01030017001 Vitis vinifera HOM05D000037 ORTHO05D000150 2.6e-06 55.8 64 42.2
Sabra19G0071300 Salix brachista HOM05D000037 ORTHO05D000150 3.4e-06 55.5 55 49.1
TPR.G24013 Trifolium pratense HOM05D000037 ORTHO05D000150 3.4e-06 55.5 55 45.5
Lalb_Chr14g0363521 Lupinus albus HOM05D000037 ORTHO05D000150 4.4e-06 55.1 40 57.5
Lalb_Chr14g0363531 Lupinus albus HOM05D000037 ORTHO05D000150 4.4e-06 55.1 40 57.5
Lalb_Chr14g0363541 Lupinus albus HOM05D000037 ORTHO05D000150 4.4e-06 55.1 40 57.5
Lalb_Chr14g0363551 Lupinus albus HOM05D000037 ORTHO05D000150 4.4e-06 55.1 40 57.5
Glyma.02G307000 Glycine max HOM05D000037 ORTHO05D000150 5.7e-06 54.7 53 47.2
Phvul.007G076900 Phaseolus vulgaris HOM05D000037 ORTHO05D000150 5.7e-06 54.7 46 50.0
Phvul.007G077000 Phaseolus vulgaris HOM05D000037 ORTHO05D000150 5.7e-06 54.7 46 50.0
TPR.G24030 Trifolium pratense HOM05D000037 ORTHO05D000150 5.7e-06 54.7 57 43.9
Ca_06469_v3 Cicer arietinum L. HOM05D000037 ORTHO05D000150 7.5e-06 54.3 55 47.3
Glyma.14G006100 Glycine max HOM05D000037 ORTHO05D000150 7.5e-06 54.3 58 43.1
Phvul.007G076550 Phaseolus vulgaris HOM05D000037 ORTHO05D000150 9.8e-06 53.9 46 52.2
Psat2g092520 Pisum sativum HOM05D000037 ORTHO05D000150 9.8e-06 53.9 50 46.0


User provided reference genes

Program Settings