Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G15290 Trifolium pratense HOM05D006020 ORTHO05D007665 5.4e-295 1016.9 515 100.0
Medtr7g058760 Medicago truncatula HOM05D006020 ORTHO05D007665 1.2e-246 856.3 516 84.1
Lj1g0020866 Lotus japonicus HOM05D006020 ORTHO05D007665 6.7e-221 770.8 515 76.3
Lalb_Chr19g0125561 Lupinus albus HOM05D006020 ORTHO05D007665 1.0e-216 756.9 515 74.4
Glyma.18G171900 Glycine max HOM05D006020 ORTHO05D007665 2.5e-215 752.3 515 74.4
VMungo1383G1607 Vigna mungo HOM05D006020 ORTHO05D007665 7.2e-207 724.2 515 72.6
Phvul.008G124000 Phaseolus vulgaris HOM05D006020 ORTHO05D007665 1.5e-204 716.5 515 72.8
Glyma.08G355500 Glycine max HOM05D006020 ORTHO05D007665 6.0e-185 651.4 467 72.4
arahy.Tifrunner.gnm1.ann1.PQ4NGV Arachis hypogaea HOM05D006020 ORTHO05D007665 1.1e-173 614.0 479 67.0
CiPaw.04G106000 Carya illinoinensis HOM05D006020 ORTHO05D007665 4.2e-146 522.3 521 53.9
GSVIVG01028621001 Vitis vinifera HOM05D006020 ORTHO05D007665 9.9e-140 501.1 518 53.3
Potri.002G241200 Populus trichocarpa HOM05D006020 ORTHO05D007665 3.2e-138 496.1 522 53.4
Prupe.8G204200 Prunus persica HOM05D006020 ORTHO05D007665 3.2e-138 496.1 519 52.0
Sabra02G0183800 Salix brachista HOM05D006020 ORTHO05D007665 6.0e-137 491.9 527 52.6
Dinv04657 Davidia involucrata HOM05D006020 ORTHO05D007665 1.5e-135 487.3 519 51.1
CANSAT01G2399 Cannabis sativa HOM05D006020 ORTHO05D007665 5.6e-135 485.3 520 51.9
Dinv19209 Davidia involucrata HOM05D006020 ORTHO05D007665 2.1e-134 483.4 521 50.5
RcHm_v2.0_Chr6g0285011 Rosa chinensis HOM05D006020 ORTHO05D007665 4.8e-134 482.3 517 52.2
Manes.12G041000 Manihot esculenta HOM05D006020 ORTHO05D007665 6.2e-134 481.9 519 50.1
Thecc.01G227300 Theobroma cacao HOM05D006020 ORTHO05D007665 1.1e-133 481.1 521 51.8
Duzib133G0822 Durio zibethinus HOM05D006020 ORTHO05D007665 2.4e-133 479.9 518 50.4
FvH4_2g19230 Fragaria vesca HOM05D006020 ORTHO05D007665 2.6e-132 476.5 519 52.2
MD05G1177200 Malus domestica HOM05D006020 ORTHO05D007665 5.8e-132 475.3 519 50.1
TWI75G0236 Tripterygium wilfordii HOM05D006020 ORTHO05D007665 5.8e-132 475.3 521 50.3
FAN27G2268 Fragaria x ananassa HOM05D006020 ORTHO05D007665 6.5e-131 471.9 520 52.5
Gorai.007G153400 Gossypium raimondii HOM05D006020 ORTHO05D007665 1.9e-130 470.3 518 49.2
Gohir.D11G143100 Gossypium hirsutum HOM05D006020 ORTHO05D007665 1.2e-129 467.6 527 48.8
Gohir.A11G136800 Gossypium hirsutum HOM05D006020 ORTHO05D007665 4.6e-129 465.7 518 48.6
Ciclev10019729m.g Citrus clementina HOM05D006020 ORTHO05D007665 3.3e-127 459.5 523 49.9
Manes.13G045000 Manihot esculenta HOM05D006020 ORTHO05D007665 2.2e-126 456.8 524 48.3
Atru.chr5.2019 Acer truncatum HOM05D006020 ORTHO05D007665 2.4e-125 453.4 520 49.6
TAR365G0939 Trochodendron aralioides HOM05D006020 ORTHO05D007665 5.3e-125 452.2 520 47.5
FAN24G1617 Fragaria x ananassa HOM05D006020 ORTHO05D007665 6.9e-125 451.8 482 52.7
QL04p091507 Quercus lobata HOM05D006020 ORTHO05D007665 1.2e-124 451.1 602 46.0
FAN15G0009 Fragaria x ananassa HOM05D006020 ORTHO05D007665 5.9e-124 448.7 573 47.6
Eucgr.K03608 Eucalyptus grandis HOM05D006020 ORTHO05D007665 1.1e-122 444.5 443 51.7
Lj1C84T12 Lonicera japonica HOM05D006020 ORTHO05D007665 1.1e-122 444.5 444 52.3
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 7.2e-122 441.8 458 51.3
PGR044G0586 Punica granatum HOM05D006020 ORTHO05D007665 2.1e-121 440.3 521 49.3
MBI10_g05712_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.0e-120 438.0 486 49.6
Sed0023867 Sechium edule HOM05D006020 ORTHO05D007665 2.3e-120 436.8 519 46.4
COL.COLO4_09005 Corchorus olitorius HOM05D006020 ORTHO05D007665 3.0e-120 436.4 573 44.9
Haze_24783 Corylus avellana HOM05D006020 ORTHO05D007665 3.0e-120 436.4 524 48.1
CsaV3_7G025840 Cucumis sativus L. HOM05D006020 ORTHO05D007665 5.1e-120 435.6 510 47.5
MELO3C012759.2 Cucumis melo HOM05D006020 ORTHO05D007665 1.3e-118 431.0 511 46.8
Psat3g144040 Pisum sativum HOM05D006020 ORTHO05D007665 4.8e-118 429.1 264 81.4
Nitab4.5_0002085g0020 Nicotiana tabacum HOM05D006020 ORTHO05D007665 4.1e-117 426.0 442 50.0
CAN.G771.64 Capsicum annuum HOM05D006020 ORTHO05D007665 6.9e-117 425.2 438 50.7
Nitab4.5_0004922g0030 Nicotiana tabacum HOM05D006020 ORTHO05D007665 5.9e-116 422.2 441 50.1
Oeu042519.1 Olea europaea HOM05D006020 ORTHO05D007665 1.1e-114 417.9 522 44.6
Sc05g0002440 Simmondsia chinensis HOM05D006020 ORTHO05D007665 3.2e-114 416.4 442 48.6
Migut.N02265 Erythranthe guttata HOM05D006020 ORTHO05D007665 1.6e-113 414.1 519 45.1
Actinidia37585 Actinidia chinensis HOM05D006020 ORTHO05D007665 3.6e-113 412.9 529 45.4
Solyc09g061420.3 Solanum lycopersicum HOM05D006020 ORTHO05D007665 6.1e-113 412.1 442 50.0
MSTRG.17550 Avicennia marina HOM05D006020 ORTHO05D007665 2.3e-112 410.2 520 45.4
Nn1g07811 Nelumbo nucifera HOM05D006020 ORTHO05D007665 3.9e-112 409.5 520 46.7
ECA236G4144 Erigeron canadensis HOM05D006020 ORTHO05D007665 8.8e-112 408.3 470 46.4
HanXRQChr10g0287321 Helianthus annuus HOM05D006020 ORTHO05D007665 1.5e-108 397.5 425 48.9
BcaB07g30043 Brassica carinata HOM05D006020 ORTHO05D007665 2.6e-108 396.7 532 45.3
Nitab4.5_0000045g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 7.7e-108 395.2 446 48.2
Nitab4.5_0001872g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 1.3e-107 394.4 447 47.9
Aa31sc866G30 Aethionema arabicum HOM05D006020 ORTHO05D007665 1.7e-107 394.0 446 48.7
C07p39450 Brassica napus HOM05D006020 ORTHO05D007665 2.9e-107 393.3 518 44.4
BolC7t44464H Brassica oleracea HOM05D006020 ORTHO05D007665 3.8e-107 392.9 518 44.4
Thhalv10004024m.g Eutrema salsugineum HOM05D006020 ORTHO05D007665 3.8e-107 392.9 518 44.4
THA.LOC104818953 Tarenaya hassleriana HOM05D006020 ORTHO05D007665 6.5e-107 392.1 512 45.1
Aqoxy5G00068 Aquilegia oxysepala HOM05D006020 ORTHO05D007665 8.5e-107 391.7 443 49.4
vmacro02750 Vaccinium macrocarpon HOM05D006020 ORTHO05D007665 2.5e-106 390.2 518 43.8
BcaC06g30754 Brassica carinata HOM05D006020 ORTHO05D007665 4.2e-106 389.4 518 44.2
AT5G48830 Arabidopsis thaliana HOM05D006020 ORTHO05D007665 9.4e-106 388.3 497 45.3
Carub.0008s0856 Capsella rubella HOM05D006020 ORTHO05D007665 9.4e-106 388.3 518 44.4
Sp2g19230 Schrenkiella parvula HOM05D006020 ORTHO05D007665 9.4e-106 388.3 444 48.4
AL8G22000 Arabidopsis lyrata HOM05D006020 ORTHO05D007665 1.0e-104 384.8 445 49.0
ATR0736G004 Amborella trichopoda HOM05D006020 ORTHO05D007665 3.9e-104 382.9 528 41.5
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 3.9e-104 382.9 445 47.2
ClCG09G009100 Citrullus lanatus HOM05D006020 ORTHO05D007665 6.7e-104 382.1 506 43.3
Cc01_g17190 Coffea canephora HOM05D006020 ORTHO05D007665 2.0e-103 380.6 520 43.3
BraA06t26802Z Brassica rapa HOM05D006020 ORTHO05D007665 2.6e-103 380.2 455 46.2
BolC2t11751H Brassica oleracea HOM05D006020 ORTHO05D007665 5.7e-103 379.0 521 43.6
BcaC03g17676 Brassica carinata HOM05D006020 ORTHO05D007665 7.4e-103 378.6 523 43.8
C02p56820 Brassica napus HOM05D006020 ORTHO05D007665 7.4e-103 378.6 523 43.8
CARHR182910 Cardamine hirsuta HOM05D006020 ORTHO05D007665 3.7e-102 376.3 515 43.1
A02p37730 Brassica napus HOM05D006020 ORTHO05D007665 2.4e-101 373.6 449 47.7
EL10Ac7g17782 Beta vulgaris HOM05D006020 ORTHO05D007665 4.1e-101 372.9 522 41.8
Sopen09g024240 Solanum pennellii HOM05D006020 ORTHO05D007665 5.3e-101 372.5 530 41.9
AUR62031841 Chenopodium quinoa HOM05D006020 ORTHO05D007665 2.6e-100 370.2 532 39.3
BraA02t08755Z Brassica rapa HOM05D006020 ORTHO05D007665 4.5e-100 369.4 449 47.4
Hund05517 Selenicereus undatus HOM05D006020 ORTHO05D007665 7.7e-100 368.6 520 41.9
Lsat_1_v5_gn_8_90041 Lactuca sativa HOM05D006066 ORTHO05D007720 3.6e-97 359.8 458 45.4
PSO674G0123 Papaver somniferum HOM05D006020 ORTHO05D007665 2.3e-96 357.1 436 47.2
SalBow2G1017 Salvia bowleyana HOM05D006020 ORTHO05D007665 8.8e-96 355.1 442 46.2
TAR362G0890 Trochodendron aralioides HOM05D006020 ORTHO05D007665 2.0e-95 354.0 353 52.7
AUR62008869 Chenopodium quinoa HOM05D006020 ORTHO05D007665 2.4e-93 347.1 498 39.2
MBI19_g27116_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.4e-85 321.2 307 55.4
CDE06G1596 Ceratophyllum demersum HOM05D006020 ORTHO05D007665 7.0e-85 318.9 375 46.7
HPP92_017884 Vanilla planifolia HOM05D006020 ORTHO05D007665 3.5e-84 316.6 441 41.7
arahy.Tifrunner.gnm1.ann1.PG1H4F Arachis hypogaea HOM05D006020 ORTHO05D007665 9.5e-82 308.5 306 56.5
PSO170G4604 Papaver somniferum HOM05D006020 ORTHO05D007665 1.4e-80 304.7 395 45.1
Ah.08g213940 Amaranthus hybridus HOM05D006020 ORTHO05D007665 2.3e-80 303.9 375 42.1
Zm00001eb241910 Zea mays HOM05D006020 ORTHO05D007665 1.7e-75 287.7 534 37.1
arahy.Tifrunner.gnm1.ann1.3CP2KK Arachis hypogaea HOM05D001055 ORTHO05D000867 1.1e-74 285.0 192 75.5
SEGI_37377 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 1.8e-72 277.7 444 37.8
DCAR_018556 Daucus carota HOM05D006066 ORTHO05D007720 2.6e-71 273.9 371 41.5
Actinidia30087 Actinidia chinensis HOM05D006020 ORTHO05D007665 1.6e-68 264.6 209 64.1
Psat3g144000 Pisum sativum HOM05D006020 ORTHO05D007665 2.5e-66 257.3 142 89.4
Peaxi162Scf00107g00133 Petunia axillaris HOM05D006020 ORTHO05D007665 1.2e-57 228.4 439 34.6
MBI09_g17752_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 9.2e-53 212.2 307 43.0
SGA_v2.0_scaffold42G16144 Striga asiatica HOM05D006020 ORTHO05D007665 1.2e-52 211.8 341 39.6
MBI01_g07173_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 4.6e-52 209.9 307 41.0
Mapoly0173s0025 Marchantia polymorpha HOM05D006020 ORTHO05D007665 4.3e-50 203.4 470 30.2
HPP92_017879 Vanilla planifolia HOM05D006020 ORTHO05D007665 2.9e-46 190.7 277 40.1
AagrBONN_evm.TU.Sc2ySwM_344.2296 Anthoceros agrestis HOM05D006020 ORTHO05D007665 4.9e-46 189.9 450 32.7
Pp3c24_4300 Physcomitrium patens HOM05D006020 ORTHO05D007665 5.4e-45 186.4 462 31.0
SEGI_14686 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 7.8e-44 182.6 238 44.1
SMO115G0313 Selaginella moellendorffii HOM05D006020 ORTHO05D007665 4.8e-41 173.3 443 30.7
FAN15G1634 Fragaria x ananassa HOM05D006020 ORTHO05D007665 3.1e-40 170.6 268 42.5
unitig_85.g27279 Utricularia gibba HOM05D006020 ORTHO05D007665 1.0e-35 155.6 141 55.3
MBI16_g14987_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 8.1e-33 146.0 125 61.6
MBI12_g18650_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.9e-26 124.8 163 42.9
Cpa.g.sc8.167 Carica papaya HOM05D006020 ORTHO05D007665 6.2e-25 119.8 119 51.3
PRCOL_00001532 Prasinoderma coloniale HOM05D006020 ORTHO05D007665 5.0e-14 83.6 194 30.9
CBR_g31943 Chara braunii HOM05D006020 ORTHO05D007665 1.4e-13 82.0 68 55.9
MBI12_g40856_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 3.2e-13 80.9 116 36.2
MBI16_g14988_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.1e-12 78.2 98 39.8
TAR362G0264 Trochodendron aralioides HOM05D006020 ORTHO05D007665 3.0e-11 74.3 104 43.3
Cpa.g.sc8.168 Carica papaya HOM05D006020 ORTHO05D007665 1.5e-10 72.0 145 33.1
MCO16G349 Micromonas commoda HOM05D006020 ORTHO05D007665 5.9e-07 60.1 63 44.4


User provided reference genes

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