Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 2.1e-61 238.8 120 100.0
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 7.1e-57 223.8 115 98.3
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 7.0e-36 154.1 116 69.8
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 1.7e-34 149.4 116 65.5
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 1.7e-34 149.4 116 65.5
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 1.8e-31 139.4 126 62.7
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 3.1e-28 128.6 113 61.1
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 3.1e-28 128.6 116 58.6
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 7.0e-28 127.5 113 60.2
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 7.7e-27 124.0 118 60.2
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 3.6e-24 115.2 114 57.9
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 1.2e-22 110.2 109 55.0
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 2.2e-21 105.9 115 53.0
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 8.3e-21 104.0 115 52.2
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 6.1e-16 87.8 115 45.2
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 3.0e-15 85.5 119 43.7
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 5.2e-15 84.7 121 41.3
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 6.8e-15 84.3 121 40.5
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 8.8e-15 84.0 119 42.9
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 8.8e-15 84.0 113 44.2
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 1.2e-14 83.6 120 36.7
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 2.0e-14 82.8 111 46.8
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 5.7e-14 81.3 103 46.6
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 7.5e-14 80.9 103 44.7
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 1.7e-13 79.7 109 44.0
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 4.8e-13 78.2 122 43.4
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 1.4e-12 76.6 117 40.2
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 1.8e-12 76.3 110 40.9
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 4.1e-12 75.1 123 36.6
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 9.1e-12 73.9 113 42.5
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 1.2e-11 73.6 107 43.0
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 1.6e-11 73.2 116 43.1
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 1.6e-11 73.2 122 41.0
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 3.5e-11 72.0 106 41.5
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 1.3e-10 70.1 106 40.6
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 1.3e-10 70.1 112 42.9
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 1.3e-10 70.1 106 40.6
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 3.8e-10 68.6 105 41.0
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 5.0e-10 68.2 104 39.4
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 6.6e-10 67.8 102 41.2
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 1.9e-09 66.2 112 41.1
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 9.5e-09 63.9 111 39.6
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 2.1e-08 62.8 116 37.1
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 4.7e-08 61.6 112 40.2
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 1.0e-07 60.5 80 38.8
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 1.4e-07 60.1 110 35.5
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 2.3e-07 59.3 106 41.5
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 3.0e-07 58.9 113 36.3
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 1.2e-06 57.0 116 34.5
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 2.0e-06 56.2 115 37.4
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 7.5e-06 54.3 109 36.7
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 7.5e-06 54.3 75 45.3


User provided reference genes

Program Settings