Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14879 Trifolium pratense HOM05D065533 ORTHO05D034849 4.4e-49 197.6 96 100.0
TPR.G2575 Trifolium pratense HOM05D065533 ORTHO05D034849 3.5e-38 161.4 88 88.6
Medtr1g027310 Medicago truncatula HOM05D000018 ORTHO05D010764 3.1e-26 121.7 85 70.6
Lj1g0022746 Lotus japonicus HOM05D000018 ORTHO05D010764 1.5e-17 92.8 85 56.5
Psat0s2787g0080 Pisum sativum HOM05D000018 ORTHO05D010764 1.2e-14 83.2 52 71.2
Glyma.13G036200 Glycine max HOM05D000018 ORTHO05D010764 2.5e-12 75.5 85 44.7
Medtr1g027290 Medicago truncatula HOM05D000018 ORTHO05D010764 4.3e-12 74.7 62 67.7
Glyma.01G137100 Glycine max HOM05D000018 ORTHO05D010764 1.6e-11 72.8 86 46.5
Phvul.001G065300 Phaseolus vulgaris HOM05D000018 ORTHO05D010764 2.1e-11 72.4 85 45.9
arahy.Tifrunner.gnm1.ann1.HP5FFL Arachis hypogaea HOM05D000018 ORTHO05D010764 1.8e-10 69.3 45 68.9
arahy.Tifrunner.gnm1.ann1.IIL2TF Arachis hypogaea HOM05D000018 ORTHO05D010764 1.8e-10 69.3 45 68.9
arahy.Tifrunner.gnm1.ann1.PJM8NX Arachis hypogaea HOM05D000018 ORTHO05D010764 4.0e-10 68.2 45 66.7
FAN24G2391 Fragaria x ananassa HOM05D000018 ORTHO05D010764 5.2e-10 67.8 66 50.0
FvH4_2g15310 Fragaria vesca HOM05D000018 ORTHO05D010764 4.4e-09 64.7 66 48.5
RcHm_v2.0_Chr6g0278051 Rosa chinensis HOM05D000018 ORTHO05D010764 1.7e-08 62.8 73 45.2
VMungo0331G0226 Vigna mungo HOM05D000018 ORTHO05D010764 1.7e-08 62.8 43 65.1
VMungo0647G0426 Vigna mungo HOM05D000018 ORTHO05D010764 2.9e-08 62.0 70 45.7
FAN24G1212 Fragaria x ananassa HOM05D008281 ORTHO05D010793 8.4e-08 60.5 90 37.8
Gorai.003G090400 Gossypium raimondii HOM05D000018 ORTHO05D010764 8.4e-08 60.5 45 57.8
Prupe.8G011200 Prunus persica HOM05D000018 ORTHO05D010764 1.1e-07 60.1 72 45.8
Gohir.1Z057300 Gossypium hirsutum HOM05D000018 ORTHO05D010764 1.9e-07 59.3 45 55.6
Gohir.D03G070000 Gossypium hirsutum HOM05D000018 ORTHO05D010764 1.9e-07 59.3 45 55.6
Gorai.003G090100 Gossypium raimondii HOM05D000018 ORTHO05D010764 1.9e-07 59.3 45 55.6
Gorai.003G090200 Gossypium raimondii HOM05D000018 ORTHO05D010764 1.9e-07 59.3 45 55.6
Thecc.08G137200 Theobroma cacao HOM05D000018 ORTHO05D010764 1.9e-07 59.3 61 52.5
FvH4_2g15311 Fragaria vesca HOM05D008281 ORTHO05D010793 5.4e-07 57.8 85 38.8
MD05G1008900 Malus domestica HOM05D000018 ORTHO05D010764 5.4e-07 57.8 38 63.2
Prupe.8G011000 Prunus persica HOM05D000018 ORTHO05D010764 7.1e-07 57.4 42 64.3
Potri.005G185000 Populus trichocarpa HOM05D000018 ORTHO05D010764 1.2e-06 56.6 45 55.6
Gohir.D03G070102 Gossypium hirsutum HOM05D000018 ORTHO05D010764 2.1e-06 55.8 37 64.9
Sopen01g048110 Solanum pennellii HOM05D000018 ORTHO05D001333 2.1e-06 55.8 58 50.0
PGSC0003DMG400033567 Solanum tuberosum HOM05D000018 ORTHO05D001333 3.5e-06 55.1 61 45.9
Thecc.08G137300 Theobroma cacao HOM05D000018 ORTHO05D010764 3.5e-06 55.1 46 56.5
COL.COLO4_27656 Corchorus olitorius HOM05D000018 ORTHO05D010764 4.6e-06 54.7 87 43.7
Gorai.005G054500 Gossypium raimondii HOM05D000018 ORTHO05D010764 6.0e-06 54.3 44 52.3
Gorai.005G054600 Gossypium raimondii HOM05D000018 ORTHO05D010764 6.0e-06 54.3 44 52.3
Gohir.D02G049300 Gossypium hirsutum HOM05D000018 ORTHO05D010764 7.8e-06 53.9 44 52.3
Gohir.D02G049400 Gossypium hirsutum HOM05D000018 ORTHO05D010764 7.8e-06 53.9 44 52.3


User provided reference genes

Program Settings