Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14847 Trifolium pratense HOM05D006482 ORTHO05D008149 1.3e-27 125.9 65 100.0
Psat5g073480 Pisum sativum HOM05D006482 ORTHO05D008149 9.6e-26 119.8 65 93.8
Medtr3g092270 Medicago truncatula HOM05D006482 ORTHO05D008149 2.1e-25 118.6 65 93.8
Lj1g0026941 Lotus japonicus HOM05D006482 ORTHO05D008149 8.1e-25 116.7 65 92.3
Phvul.009G047100 Phaseolus vulgaris HOM05D006482 ORTHO05D008149 1.7e-22 109.0 65 83.1
Glyma.04G230700 Glycine max HOM05D006482 ORTHO05D008149 7.1e-21 103.6 65 78.5
Lalb_Chr11g0067291 Lupinus albus HOM05D006482 ORTHO05D008149 2.1e-20 102.1 65 80.0
TAR374G1512 Trochodendron aralioides HOM05D006482 ORTHO05D008149 3.5e-20 101.3 65 76.9
Prupe.2G317400 Prunus persica HOM05D006482 ORTHO05D008149 1.7e-19 99.0 65 75.4
Atru.chr12.2369 Acer truncatum HOM05D006482 ORTHO05D008149 2.3e-19 98.6 65 73.8
arahy.Tifrunner.gnm1.ann1.ZIU4UI Arachis hypogaea HOM05D006482 ORTHO05D008149 2.3e-19 98.6 65 73.8
QL05p036199 Quercus lobata HOM05D006482 ORTHO05D008149 2.3e-19 98.6 65 75.4
Thecc.03G206900 Theobroma cacao HOM05D006482 ORTHO05D008149 3.0e-19 98.2 65 72.3
Ciclev10023193m.g Citrus clementina HOM05D006482 ORTHO05D008149 3.9e-19 97.8 65 76.9
PGR142G0199 Punica granatum HOM05D006482 ORTHO05D008149 5.1e-19 97.4 65 73.8
Dinv18742 Davidia involucrata HOM05D006482 ORTHO05D008149 6.6e-19 97.1 65 70.8
Duzib205G0332 Durio zibethinus HOM05D006482 ORTHO05D008149 6.6e-19 97.1 65 73.8
arahy.Tifrunner.gnm1.ann1.CVH3M3 Arachis hypogaea HOM05D006482 ORTHO05D008149 8.7e-19 96.7 65 72.3
Oeu010737.1 Olea europaea HOM05D006482 ORTHO05D008149 1.1e-18 96.3 65 69.2
GSVIVG01038627001 Vitis vinifera HOM05D006482 ORTHO05D008149 1.1e-18 96.3 65 72.3
Glyma.04G154600 Glycine max HOM05D006482 ORTHO05D008149 1.5e-18 95.9 61 78.7
Gohir.A08G103900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 1.5e-18 95.9 65 73.8
RcHm_v2.0_Chr1g0382671 Rosa chinensis HOM05D006482 ORTHO05D008149 1.5e-18 95.9 63 73.0
CiPaw.05G203100 Carya illinoinensis HOM05D006482 ORTHO05D008149 1.9e-18 95.5 65 70.8
COL.COLO4_14353 Corchorus olitorius HOM05D006482 ORTHO05D008149 1.9e-18 95.5 65 70.8
Lalb_Chr23g0271851 Lupinus albus HOM05D006482 ORTHO05D008149 1.9e-18 95.5 65 73.8
Manes.01G041500 Manihot esculenta HOM05D006482 ORTHO05D008149 3.3e-18 94.7 65 69.2
Gohir.D08G115300 Gossypium hirsutum HOM05D006482 ORTHO05D008149 4.3e-18 94.4 65 72.3
Gorai.004G124200 Gossypium raimondii HOM05D006482 ORTHO05D008149 4.3e-18 94.4 65 72.3
Potri.015G006500 Populus trichocarpa HOM05D006482 ORTHO05D008149 4.3e-18 94.4 65 69.2
Gorai.008G265700 Gossypium raimondii HOM05D006482 ORTHO05D008149 5.6e-18 94.0 65 72.3
ECA233G2670 Erigeron canadensis HOM05D006482 ORTHO05D008149 7.3e-18 93.6 63 71.4
FvH4_7g32700 Fragaria vesca HOM05D006482 ORTHO05D008149 7.3e-18 93.6 63 71.4
FAN01G3112 Fragaria x ananassa HOM05D006482 ORTHO05D008149 7.3e-18 93.6 63 71.4
FAN03G2872 Fragaria x ananassa HOM05D006482 ORTHO05D008149 7.3e-18 93.6 63 71.4
MD01G1227400 Malus domestica HOM05D006482 ORTHO05D008149 7.3e-18 93.6 63 73.0
TAR629G1047 Trochodendron aralioides HOM05D006482 ORTHO05D008149 7.3e-18 93.6 65 69.2
Aa31LG3G9780 Aethionema arabicum HOM05D006482 ORTHO05D008149 9.6e-18 93.2 64 71.9
Glyma.06G134500 Glycine max HOM05D006482 ORTHO05D008149 9.6e-18 93.2 65 75.4
PSO063G1999 Papaver somniferum HOM05D006482 ORTHO05D008149 1.3e-17 92.8 63 68.3
TWI14G0741 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 1.3e-17 92.8 65 67.7
Dinv29224 Davidia involucrata HOM05D006482 ORTHO05D008149 1.6e-17 92.4 65 66.2
CSS0017170 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 2.1e-17 92.0 65 67.7
Potri.012G022900 Populus trichocarpa HOM05D006482 ORTHO05D008149 2.1e-17 92.0 63 69.8
Eucgr.K00422 Eucalyptus grandis HOM05D006482 ORTHO05D008149 2.8e-17 91.7 65 70.8
Sabra15G0004500 Salix brachista HOM05D006482 ORTHO05D008149 2.8e-17 91.7 65 67.7
TWI39G0373 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 2.8e-17 91.7 65 66.2
Actinidia27284 Actinidia chinensis HOM05D000567 ORTHO05D000767 3.6e-17 91.3 65 69.2
CANSAT21G0227 Cannabis sativa HOM05D006482 ORTHO05D008149 3.6e-17 91.3 63 68.3
Rhsim03G0214200 Rhododendron simsii HOM05D006482 ORTHO05D008149 3.6e-17 91.3 65 66.2
AL8G28600 Arabidopsis lyrata HOM05D006482 ORTHO05D008149 6.2e-17 90.5 63 69.8
vmacro06428 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 6.2e-17 90.5 65 67.7
Ah.13g070630 Amaranthus hybridus HOM05D006482 ORTHO05D008149 8.1e-17 90.1 63 71.4
Lsat_1_v5_gn_6_10060 Lactuca sativa HOM05D006482 ORTHO05D008149 8.1e-17 90.1 63 69.8
Nn3g18841 Nelumbo nucifera HOM05D006482 ORTHO05D008149 8.1e-17 90.1 63 71.4
A03p15030 Brassica napus HOM05D006482 ORTHO05D008149 1.1e-16 89.7 63 68.3
BraA03t10797Z Brassica rapa HOM05D006482 ORTHO05D008149 1.1e-16 89.7 63 68.3
CDE09G1364 Ceratophyllum demersum HOM05D001294 ORTHO05D001178 1.1e-16 89.7 65 67.7
EL10Ac3g05199 Beta vulgaris HOM05D006482 ORTHO05D008149 1.8e-16 89.0 63 71.4
Carub.0008s1398 Capsella rubella HOM05D006482 ORTHO05D008149 1.8e-16 89.0 63 68.3
Thhalv10015198m.g Eutrema salsugineum HOM05D006482 ORTHO05D008149 1.8e-16 89.0 63 68.3
HanXRQChr07g0192381 Helianthus annuus HOM05D006482 ORTHO05D008149 1.8e-16 89.0 63 69.8
Nitab4.5_0002720g0020 Nicotiana tabacum HOM05D006482 ORTHO05D008149 1.8e-16 89.0 65 64.6
SalBow3G2365 Salvia bowleyana HOM05D006482 ORTHO05D008149 1.8e-16 89.0 65 66.2
Sp6g15770 Schrenkiella parvula HOM05D006482 ORTHO05D008149 1.8e-16 89.0 63 68.3
Gohir.A12G246900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 2.4e-16 88.6 65 66.2
BcaB01g04252 Brassica carinata HOM05D006482 ORTHO05D008149 3.1e-16 88.2 63 66.7
C03p17520 Brassica napus HOM05D006482 ORTHO05D008149 3.1e-16 88.2 63 66.7
BolC3t14165H Brassica oleracea HOM05D006482 ORTHO05D008149 3.1e-16 88.2 63 66.7
CARHR266810 Cardamine hirsuta HOM05D006482 ORTHO05D008149 3.1e-16 88.2 63 68.3
Sc19g0000660 Simmondsia chinensis HOM05D006482 ORTHO05D008149 3.1e-16 88.2 63 69.8
Duzib068G1219 Durio zibethinus HOM05D006482 ORTHO05D008149 4.0e-16 87.8 80 60.0
AT5G53650 Arabidopsis thaliana HOM05D006482 ORTHO05D008149 5.3e-16 87.4 63 66.7
BcaC01g06263 Brassica carinata HOM05D006482 ORTHO05D008149 5.3e-16 87.4 63 66.7
Migut.E00300 Erythranthe guttata HOM05D006482 ORTHO05D008149 5.3e-16 87.4 60 70.0
Nitab4.5_0008141g0050 Nicotiana tabacum HOM05D006482 ORTHO05D008149 5.3e-16 87.4 65 63.1
Hma1.2p1_0456F.1_g156710 Hydrangea macrophylla HOM05D006482 ORTHO05D008149 9.0e-16 86.7 65 67.7
Sed0025475 Sechium edule HOM05D006482 ORTHO05D008149 9.0e-16 86.7 65 64.6
A02p10930 Brassica napus HOM05D006482 ORTHO05D008149 1.2e-15 86.3 65 63.1
Hund21041 Selenicereus undatus HOM05D006482 ORTHO05D008149 1.5e-15 85.9 63 68.3
BcaB05g22064 Brassica carinata HOM05D006482 ORTHO05D008149 2.0e-15 85.5 63 65.1
PGSC0003DMG400012236 Solanum tuberosum HOM05D006482 ORTHO05D008149 2.6e-15 85.1 65 60.0
BraA02t06158Z Brassica rapa HOM05D006482 ORTHO05D008149 3.4e-15 84.7 63 63.5
Sc13g0010170 Simmondsia chinensis HOM05D006482 ORTHO05D008149 9.9e-15 83.2 63 61.9
ClCG01G000130 Citrullus lanatus HOM05D006482 ORTHO05D008149 1.3e-14 82.8 65 61.5
Sopen08g031390 Solanum pennellii HOM05D006482 ORTHO05D008149 1.3e-14 82.8 65 58.5
THA.LOC109117152 Tarenaya hassleriana HOM05D006482 ORTHO05D008149 1.3e-14 82.8 63 65.1
unitig_699.g19497 Utricularia gibba HOM05D006482 ORTHO05D008149 1.3e-14 82.8 63 65.1
AUR62035606 Chenopodium quinoa HOM05D006482 ORTHO05D008149 1.7e-14 82.4 87 54.0
BcaC03g14399 Brassica carinata HOM05D006482 ORTHO05D008149 2.2e-14 82.0 63 60.3
C02p18140 Brassica napus HOM05D006482 ORTHO05D008149 2.2e-14 82.0 63 60.3
BolC2t07944H Brassica oleracea HOM05D006482 ORTHO05D008149 2.2e-14 82.0 63 60.3
Solyc08g083200.3 Solanum lycopersicum HOM05D006482 ORTHO05D008149 2.2e-14 82.0 65 56.9
CiPaw.06G042200 Carya illinoinensis HOM05D006482 ORTHO05D008149 2.9e-14 81.6 65 60.0
CsaV3_5G000030 Cucumis sativus L. HOM05D006482 ORTHO05D008149 2.9e-14 81.6 65 61.5
CSS0001288 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 3.8e-14 81.3 65 63.1
MELO3C005924.2 Cucumis melo HOM05D006482 ORTHO05D008149 3.8e-14 81.3 65 61.5
MD07G1297700 Malus domestica HOM05D006482 ORTHO05D008149 6.4e-14 80.5 89 52.8
Peaxi162Scf00074g00224 Petunia axillaris HOM05D006482 ORTHO05D008149 6.4e-14 80.5 64 64.1
CSS0049934 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 4.2e-13 77.8 65 61.5
Cc08_g16820 Coffea canephora HOM05D006482 ORTHO05D008149 4.2e-13 77.8 63 61.9
Sed0001965 Sechium edule HOM05D006482 ORTHO05D008149 7.1e-13 77.0 65 58.5
Hund09702 Selenicereus undatus HOM05D006482 ORTHO05D008149 9.3e-13 76.6 63 60.3
SEGI_31465 Sequoiadendron giganteum HOM05D006482 ORTHO05D008149 1.6e-12 75.9 65 60.0
Gohir.D12G247600 Gossypium hirsutum HOM05D006482 ORTHO05D008149 2.7e-12 75.1 65 64.6
Duzib084G1447 Durio zibethinus HOM05D006482 ORTHO05D008149 1.3e-11 72.8 61 60.7
HPP92_020659 Vanilla planifolia HOM05D001695 ORTHO05D002735 1.3e-11 72.8 58 58.6
CDE11G0870 Ceratophyllum demersum HOM05D006482 ORTHO05D008149 5.1e-11 70.9 99 45.5
Os05g0535700 Oryza sativa ssp. japonica HOM05D006482 ORTHO05D008149 8.7e-11 70.1 72 51.4
QL09p007382 Quercus lobata HOM05D006482 ORTHO05D008149 1.1e-10 69.7 41 80.5
Haze_00279 Corylus avellana HOM05D006482 ORTHO05D008149 1.5e-10 69.3 41 78.0
CSS0007382 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 5.6e-10 67.4 65 56.9
Sabra12G0010900 Salix brachista HOM05D006482 ORTHO05D008149 5.6e-10 67.4 41 75.6
CSS0018303 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 7.4e-10 67.0 41 73.2
FAN17G0467 Fragaria x ananassa HOM05D006482 ORTHO05D008149 7.4e-10 67.0 42 73.8
AUR62006020 Chenopodium quinoa HOM05D006482 ORTHO05D008149 1.6e-09 65.9 41 78.0
CSS0015195 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 2.8e-09 65.1 41 70.7
ATR0579G147 Amborella trichopoda HOM05D006482 ORTHO05D008149 4.8e-09 64.3 41 70.7
Eucgr.E02459 Eucalyptus grandis HOM05D006482 ORTHO05D008149 6.9e-08 60.5 47 61.7
vmacro13845 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 9.0e-08 60.1 45 64.4
Rhsim07G0077300 Rhododendron simsii HOM05D006482 ORTHO05D008149 1.2e-07 59.7 41 70.7
DCAR_006554 Daucus carota HOM05D006482 ORTHO05D008149 1.5e-07 59.3 41 70.7
Zm00001eb294050 Zea mays HOM05D006482 ORTHO05D008149 2.2e-06 55.5 58 50.0
Zm00001eb160720 Zea mays HOM05D006482 ORTHO05D008149 4.9e-06 54.3 71 42.3
FvH4_4g29090 Fragaria vesca HOM05D000768 ORTHO05D046510 8.4e-06 53.5 53 56.6


User provided reference genes

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