Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14799 Trifolium pratense HOM05D000047 ORTHO05D000589 1.8e-105 386.0 195 100.0
TPR.G16967 Trifolium pratense HOM05D000047 ORTHO05D000589 2.3e-81 305.8 195 83.1
TPR.G35080 Trifolium pratense HOM05D000047 ORTHO05D000589 3.5e-61 238.8 199 61.3
TPR.G35763 Trifolium pratense HOM05D000047 ORTHO05D000589 1.3e-55 220.3 201 58.2
TPR.G35157 Trifolium pratense HOM05D002881 ORTHO05D000589 8.1e-50 201.1 157 64.3
TPR.G35555 Trifolium pratense HOM05D000047 ORTHO05D000589 6.0e-37 158.3 108 76.9
TPR.G18553 Trifolium pratense HOM05D000047 ORTHO05D000589 1.8e-33 146.7 265 34.7
Ca_03536_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 6.4e-31 138.3 213 40.8
Ca_19747_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.9e-27 126.7 216 38.0
Ca_24076_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 2.0e-24 116.7 209 35.9
Ca_04839_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 6.4e-23 111.7 195 35.9
Medtr5g041255 Medicago truncatula HOM05D002881 ORTHO05D002983 1.1e-22 110.9 153 44.4
Ca_05332_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 1.4e-22 110.5 184 39.1
Medtr5g057040 Medicago truncatula HOM05D011496 ORTHO05D000589 9.3e-22 107.8 153 43.1
Duzib041G0625 Durio zibethinus HOM05D000047 ORTHO05D000044 2.3e-20 103.2 243 30.0
Duzib205G1183 Durio zibethinus HOM05D000047 ORTHO05D000044 2.3e-20 103.2 243 30.0
Duzib041G0566 Durio zibethinus HOM05D000047 ORTHO05D000044 5.1e-20 102.1 246 30.5
Duzib213G0125 Durio zibethinus HOM05D000047 ORTHO05D000044 6.7e-20 101.7 222 33.8
TPR.G22842 Trifolium pratense HOM05D000047 ORTHO05D000044 6.7e-20 101.7 198 36.9
Ca_23936_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 8.7e-20 101.3 95 52.6
Duzib084G1197 Durio zibethinus HOM05D000047 ORTHO05D000044 5.6e-19 98.6 222 33.8
Duzib106G2061 Durio zibethinus HOM05D000047 ORTHO05D000044 3.7e-18 95.9 196 33.7
Thecc.02G169500 Theobroma cacao HOM05D000047 ORTHO05D000589 3.7e-18 95.9 236 30.9
Ca_04841_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 8.1e-18 94.7 95 49.5
Ca_07046_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.4e-17 94.0 71 60.6
arahy.Tifrunner.gnm1.ann1.C3BVX0 Arachis hypogaea HOM05D000047 ORTHO05D000352 2.0e-16 90.1 75 57.3
TWI18G1396 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 2.0e-16 90.1 127 40.2
TWI15G0372 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 3.4e-16 89.4 140 38.6
Ca_27834_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 4.5e-16 89.0 74 59.5
Thecc.09G167400 Theobroma cacao HOM05D000047 ORTHO05D000589 5.8e-16 88.6 142 35.2
Thecc.10G163100 Theobroma cacao HOM05D000047 ORTHO05D000589 5.8e-16 88.6 142 35.2
TWI81G0102 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 1.7e-15 87.0 140 38.6
Ca_15675_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 4.9e-15 85.5 65 53.8
TPR.G16168 Trifolium pratense HOM05D000047 ORTHO05D000044 6.4e-15 85.1 79 55.7
TWI15G0701 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 6.4e-15 85.1 84 47.6
Thecc.02G251700 Theobroma cacao HOM05D000047 ORTHO05D000589 8.4e-15 84.7 142 33.1
TWI34G1550 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 3.2e-14 82.8 82 47.6
Thecc.02G202400 Theobroma cacao HOM05D000047 ORTHO05D000589 5.5e-14 82.0 170 28.8
Ca_07368_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 7.1e-14 81.6 48 72.9
Ca_13589_v3 Cicer arietinum L. HOM05D000047 ORTHO05D018996 3.5e-13 79.3 136 37.5
TWI81G0789 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 3.5e-13 79.3 84 46.4
Thecc.10G123500 Theobroma cacao HOM05D000047 ORTHO05D000589 7.9e-13 78.2 142 32.4
PGR142G3646 Punica granatum HOM05D000047 ORTHO05D000589 1.8e-12 77.0 138 36.2
TWI39G1040 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.8e-12 77.0 90 42.2
PGR083G2666 Punica granatum HOM05D000047 ORTHO05D000589 2.3e-12 76.6 138 35.5
TWI60G0143 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.3e-12 76.6 91 42.9
PGR083G2337 Punica granatum HOM05D000047 ORTHO05D007790 3.0e-12 76.3 138 35.5
PGR142G3120 Punica granatum HOM05D000047 ORTHO05D000589 3.0e-12 76.3 138 36.2
TWI59G1343 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 3.0e-12 76.3 99 42.4
PGR044G0618 Punica granatum HOM05D000047 ORTHO05D000589 3.9e-12 75.9 138 35.5
TWI15G0057 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 8.7e-12 74.7 90 41.1
TWI60G0654 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 8.7e-12 74.7 98 41.8
TPR.G36437 Trifolium pratense HOM05D000047 ORTHO05D000589 1.1e-11 74.3 36 97.2
TWI15G0028 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.5e-11 73.9 53 60.4
Ca_13231_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 3.3e-11 72.8 209 30.6
TWI15G0628 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 9.6e-11 71.2 84 41.7
Sopen12g021080 Solanum pennellii HOM05D000047 ORTHO05D001422 1.3e-10 70.9 79 41.8
PGR031G3270 Punica granatum HOM05D000047 ORTHO05D007790 1.6e-10 70.5 129 34.1
PGR031G2721 Punica granatum HOM05D000047 ORTHO05D000589 2.1e-10 70.1 136 35.3
Sopen01g016590 Solanum pennellii HOM05D000047 ORTHO05D000589 2.1e-10 70.1 139 33.8
Sopen07g017440 Solanum pennellii HOM05D000047 ORTHO05D000044 2.1e-10 70.1 143 32.9
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 2.1e-10 70.1 139 33.8
PGR142G0734 Punica granatum HOM05D000047 ORTHO05D000589 2.8e-10 69.7 137 35.8
PGR142G2721 Punica granatum HOM05D000047 ORTHO05D000589 2.8e-10 69.7 137 37.2
PGR142G0258 Punica granatum HOM05D000047 ORTHO05D000589 6.2e-10 68.6 137 36.5
Sopen07g017290 Solanum pennellii HOM05D000047 ORTHO05D000589 6.2e-10 68.6 147 29.9
PGR031G1117 Punica granatum HOM05D000047 ORTHO05D007790 1.1e-09 67.8 136 34.6
Sopen01g019870 Solanum pennellii HOM05D000047 ORTHO05D000589 1.1e-09 67.8 77 40.3
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-09 67.8 139 31.7
Sopen12g015710 Solanum pennellii HOM05D000047 ORTHO05D000589 1.1e-09 67.8 139 33.1
Sopen12g021750 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-09 67.8 139 33.1
PGR031G2889 Punica granatum HOM05D000047 ORTHO05D007790 1.4e-09 67.4 77 45.5
PGR102G0468 Punica granatum HOM05D000047 ORTHO05D000589 1.4e-09 67.4 79 43.0
Sopen07g009210 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-09 67.0 77 40.3
Sopen07g015300 Solanum pennellii HOM05D000047 ORTHO05D000589 1.8e-09 67.0 157 30.6
Sopen12g019250 Solanum pennellii HOM05D000047 ORTHO05D000589 1.8e-09 67.0 77 40.3
Sopen05g009200 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-09 66.6 77 40.3
TWI59G1198 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 2.4e-09 66.6 41 68.3
PGR044G1494 Punica granatum HOM05D000047 ORTHO05D000589 3.1e-09 66.2 78 43.6
PGR083G1005 Punica granatum HOM05D000047 ORTHO05D000044 3.1e-09 66.2 67 49.3
PGR100G0012 Punica granatum HOM05D000047 ORTHO05D000044 3.1e-09 66.2 67 49.3
Sopen02g008900 Solanum pennellii HOM05D000047 ORTHO05D000589 4.0e-09 65.9 157 31.2
Sopen06g010460 Solanum pennellii HOM05D000047 ORTHO05D000589 4.0e-09 65.9 139 32.4
Sopen08g018560 Solanum pennellii HOM05D000047 ORTHO05D000044 4.0e-09 65.9 139 32.4
Sopen12g017170 Solanum pennellii HOM05D000047 ORTHO05D000044 4.0e-09 65.9 139 32.4
TPR.G18586 Trifolium pratense HOM05D002881 ORTHO05D000589 4.0e-09 65.9 36 77.8
Sopen04g017320 Solanum pennellii HOM05D000047 ORTHO05D000589 5.3e-09 65.5 139 32.4
Sopen05g011640 Solanum pennellii HOM05D000047 ORTHO05D000589 5.3e-09 65.5 141 32.6
Sopen05g025520 Solanum pennellii HOM05D000047 ORTHO05D000044 5.3e-09 65.5 139 32.4
Lalb_Chr03g0038241 Lupinus albus HOM05D000047 ORTHO05D000352 6.9e-09 65.1 59 45.8
PGR119G2436 Punica granatum HOM05D000047 ORTHO05D000044 9.0e-09 64.7 61 47.5
TWI56G0286 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 9.0e-09 64.7 38 68.4
PGR004G2002 Punica granatum HOM05D000047 ORTHO05D000589 1.2e-08 64.3 136 34.6
PGR102G2161 Punica granatum HOM05D000047 ORTHO05D000044 1.2e-08 64.3 69 47.8
Sopen03g011900 Solanum pennellii HOM05D000047 ORTHO05D000044 1.2e-08 64.3 77 39.0
Sopen03g011950 Solanum pennellii HOM05D000047 ORTHO05D000044 1.2e-08 64.3 120 34.2
PGR042G0671 Punica granatum HOM05D000047 ORTHO05D007790 1.5e-08 63.9 58 53.4
PGR031G2164 Punica granatum HOM05D000047 ORTHO05D000589 2.0e-08 63.5 73 46.6
PGR044G1493 Punica granatum HOM05D000047 ORTHO05D000589 2.0e-08 63.5 58 48.3
PGR102G2542 Punica granatum HOM05D000047 ORTHO05D000589 2.0e-08 63.5 77 42.9
PGR119G1186 Punica granatum HOM05D000047 ORTHO05D000589 2.0e-08 63.5 59 47.5
Sopen01g013970 Solanum pennellii HOM05D000047 ORTHO05D000589 2.0e-08 63.5 139 31.7
Sopen05g021780 Solanum pennellii HOM05D000047 ORTHO05D000589 2.0e-08 63.5 77 39.0
PGR004G2751 Punica granatum HOM05D000047 ORTHO05D000589 2.6e-08 63.2 58 48.3
Sopen01g010260 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-08 63.2 137 32.1
Sopen01g027730 Solanum pennellii HOM05D000047 ORTHO05D000044 3.4e-08 62.8 140 31.4
Sopen03g009310 Solanum pennellii HOM05D000047 ORTHO05D000044 3.4e-08 62.8 77 41.6
Sopen05g018910 Solanum pennellii HOM05D000047 ORTHO05D000044 3.4e-08 62.8 140 31.4
Sopen08g011490 Solanum pennellii HOM05D000047 ORTHO05D000044 3.4e-08 62.8 140 31.4
Sopen12g017930 Solanum pennellii HOM05D000047 ORTHO05D000044 3.4e-08 62.8 140 31.4
PGR031G0145 Punica granatum HOM05D000047 ORTHO05D000589 4.5e-08 62.4 115 33.9
PGR031G1972 Punica granatum HOM05D000047 ORTHO05D000589 4.5e-08 62.4 68 41.2
Sopen01g017890 Solanum pennellii HOM05D000047 ORTHO05D000589 4.5e-08 62.4 140 32.1
PGR031G0507 Punica granatum HOM05D000047 ORTHO05D000589 5.8e-08 62.0 58 46.6
Sopen03g019140 Solanum pennellii HOM05D000047 ORTHO05D000044 5.8e-08 62.0 77 41.6
Sopen11g014820 Solanum pennellii HOM05D000047 ORTHO05D000044 5.8e-08 62.0 150 30.0
Sopen11g018650 Solanum pennellii HOM05D000047 ORTHO05D001422 5.8e-08 62.0 77 40.3
PGR004G0317 Punica granatum HOM05D000047 ORTHO05D007790 7.6e-08 61.6 195 28.7
Sopen01g020530 Solanum pennellii HOM05D000047 ORTHO05D000044 7.6e-08 61.6 141 31.9
Sopen02g004460 Solanum pennellii HOM05D000047 ORTHO05D000589 7.6e-08 61.6 77 41.6
Sopen02g006620 Solanum pennellii HOM05D000047 ORTHO05D000589 7.6e-08 61.6 140 31.4
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 7.6e-08 61.6 77 40.3
PGR031G1973 Punica granatum HOM05D000047 ORTHO05D000044 1.0e-07 61.2 49 57.1
PGR044G2529 Punica granatum HOM05D000047 ORTHO05D000044 1.0e-07 61.2 49 57.1
Sopen10g027690 Solanum pennellii HOM05D000047 ORTHO05D000044 1.0e-07 61.2 187 28.3
Sopen00g006390 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-07 60.8 77 36.4
PGR119G1948 Punica granatum HOM05D000047 ORTHO05D000589 1.7e-07 60.5 49 51.0
Sopen03g011510 Solanum pennellii HOM05D000047 ORTHO05D000589 2.2e-07 60.1 97 35.1
Sopen04g010930 Solanum pennellii HOM05D000047 ORTHO05D000044 2.9e-07 59.7 77 40.3
Sopen05g022540 Solanum pennellii HOM05D000047 ORTHO05D000589 2.9e-07 59.7 140 30.7
Sopen06g005060 Solanum pennellii HOM05D000047 ORTHO05D000044 2.9e-07 59.7 140 30.7
PGR044G0485 Punica granatum HOM05D000047 ORTHO05D000589 3.8e-07 59.3 65 46.2
Sopen01g018160 Solanum pennellii HOM05D000047 ORTHO05D000589 3.8e-07 59.3 77 39.0
Sopen03g009570 Solanum pennellii HOM05D000047 ORTHO05D000589 3.8e-07 59.3 97 36.1
Sopen04g013020 Solanum pennellii HOM05D000047 ORTHO05D000589 3.8e-07 59.3 77 36.4
Sopen05g027320 Solanum pennellii HOM05D000047 ORTHO05D000044 3.8e-07 59.3 111 34.2
Sopen12g012670 Solanum pennellii HOM05D000047 ORTHO05D000589 3.8e-07 59.3 77 35.1
PGR031G0749 Punica granatum HOM05D000047 ORTHO05D000589 4.9e-07 58.9 79 43.0
PGR102G2989 Punica granatum HOM05D000047 ORTHO05D000589 4.9e-07 58.9 58 50.0
Thecc.09G164600 Theobroma cacao HOM05D000047 ORTHO05D000589 6.5e-07 58.5 49 46.9
PGR142G1178 Punica granatum HOM05D000047 ORTHO05D000589 8.4e-07 58.2 67 41.8
Sopen11g014900 Solanum pennellii HOM05D000047 ORTHO05D000589 1.1e-06 57.8 140 30.0
Sopen01g020560 Solanum pennellii HOM05D000047 ORTHO05D000589 1.9e-06 57.0 77 35.1
PGR031G0252 Punica granatum HOM05D000047 ORTHO05D000589 2.5e-06 56.6 39 64.1
PGSC0003DMG400037360 Solanum tuberosum HOM05D000047 ORTHO05D000589 3.2e-06 56.2 145 29.0
Ca_02666_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 4.2e-06 55.8 150 31.3
PSO339G5462 Papaver somniferum HOM05D000047 ORTHO05D001383 4.2e-06 55.8 37 59.5
PGSC0003DMG400023285 Solanum tuberosum HOM05D000047 ORTHO05D000589 4.2e-06 55.8 145 30.3
Sopen11g022480 Solanum pennellii HOM05D000047 ORTHO05D000589 5.5e-06 55.5 77 39.0
MBI11_g09461_MAGBIO Magnolia biondii HOM05D007969 ORTHO05D004604 7.1e-06 55.1 155 26.5


User provided reference genes

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