Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 1.5e-104 382.9 197 100.0
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 5.4e-78 294.7 197 77.2
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 1.3e-71 273.5 196 73.0
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 4.9e-71 271.6 187 75.4
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 6.0e-61 238.0 197 65.0
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 3.6e-58 228.8 186 66.1
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 6.9e-57 224.6 186 65.1
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 5.4e-54 214.9 179 63.7
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 1.6e-53 213.4 185 61.6
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 4.3e-51 205.3 126 80.2
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 2.8e-50 202.6 123 78.9
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 3.7e-50 202.2 128 78.1
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 3.7e-50 202.2 169 61.5
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 6.2e-50 201.4 130 74.6
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 6.2e-50 201.4 130 74.6
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 1.1e-49 200.7 122 77.9
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 2.4e-49 199.5 377 37.9
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 5.3e-49 198.4 126 77.0
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 9.0e-49 197.6 123 77.2
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 1.5e-48 196.8 123 76.4
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 1.5e-48 196.8 197 57.4
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 2.0e-48 196.4 122 77.0
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 7.6e-48 194.5 129 72.9
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 7.6e-48 194.5 122 73.8
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 1.0e-47 194.1 124 73.4
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 1.0e-47 194.1 131 74.0
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 1.3e-47 193.7 129 72.1
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 1.3e-47 193.7 197 55.8
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 1.3e-47 193.7 129 73.6
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 1.7e-47 193.4 123 75.6
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 2.9e-47 192.6 123 74.8
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 6.5e-47 191.4 121 73.6
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 6.5e-47 191.4 129 72.1
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 6.5e-47 191.4 132 69.7
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 8.4e-47 191.0 130 71.5
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 1.1e-46 190.7 130 70.0
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 1.1e-46 190.7 128 73.4
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 7.1e-46 188.0 194 56.7
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 1.2e-45 187.2 176 57.4
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 1.6e-45 186.8 193 54.9
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 1.6e-45 186.8 123 72.4
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 2.1e-45 186.4 123 71.5
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 2.1e-45 186.4 158 57.0
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 3.5e-45 185.7 177 56.5
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 3.5e-45 185.7 122 73.8
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 4.6e-45 185.3 132 70.5
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 4.6e-45 185.3 117 74.4
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 6.0e-45 184.9 123 74.0
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 6.0e-45 184.9 130 66.9
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 7.9e-45 184.5 133 72.2
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 1.0e-44 184.1 132 68.9
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 1.8e-44 183.3 184 56.5
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 3.0e-44 182.6 129 71.3
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 3.9e-44 182.2 130 71.5
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 8.7e-44 181.0 124 73.4
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 8.7e-44 181.0 122 70.5
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 8.7e-44 181.0 122 70.5
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 1.9e-43 179.9 153 59.5
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 1.9e-43 179.9 132 66.7
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 5.7e-43 178.3 123 65.9
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 1.3e-42 177.2 131 64.9
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 3.7e-42 175.6 133 63.2
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 6.2e-42 174.9 162 57.4
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 6.2e-42 174.9 114 73.7
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 3.1e-41 172.6 114 72.8
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 4.0e-41 172.2 125 68.8
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 5.3e-41 171.8 128 66.4
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 9.0e-41 171.0 126 66.7
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 9.0e-41 171.0 126 66.7
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 1.5e-40 170.2 126 65.9
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 2.0e-40 169.9 126 65.9
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 2.0e-40 169.9 126 65.9
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 2.0e-40 169.9 128 67.2
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 2.6e-40 169.5 123 68.3
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 4.5e-40 168.7 128 65.6
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 5.8e-40 168.3 126 65.1
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 2.9e-39 166.0 143 58.0
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.9e-38 163.3 164 52.4
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 2.5e-38 162.9 131 61.1
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 2.5e-38 162.9 132 63.6
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 4.6e-37 158.7 128 62.5
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 1.3e-36 157.1 114 64.9
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 1.1e-35 154.1 208 49.0
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 1.1e-35 154.1 208 49.0
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.1e-35 154.1 143 56.6
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 1.9e-35 153.3 134 59.7
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.3e-35 152.5 121 63.6
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 3.3e-35 152.5 124 60.5
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 4.8e-34 148.7 135 57.8
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 1.1e-33 147.5 128 63.3
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 2.4e-33 146.4 122 61.5
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 6.9e-33 144.8 143 55.9
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 2.2e-31 139.8 132 56.1
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 2.2e-31 139.8 129 55.0
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 5.0e-31 138.7 118 56.8
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 1.5e-27 127.1 116 53.4
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 4.8e-26 122.1 82 72.0
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 8.2e-26 121.3 66 83.3
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 1.8e-25 120.2 82 72.0
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 2.4e-25 119.8 66 81.8
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 2.0e-24 116.7 114 50.0
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 9.1e-17 91.3 80 56.2
Glyma.02G201900 Glycine max HOM05D007282 ORTHO05D009214 1.5e-11 73.9 101 48.5
VMungo0720G2657 Vigna mungo HOM05D007282 ORTHO05D009214 8.2e-10 68.2 97 42.3
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 2.0e-08 63.5 52 59.6
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 5.0e-07 58.9 49 57.1
MCO16G381 Micromonas commoda HOM05D007282 ORTHO05D009214 1.1e-06 57.8 125 28.0


User provided reference genes

Program Settings