Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14766 Trifolium pratense HOM05D003486 ORTHO05D004600 9.0e-99 363.6 186 100.0
Cfa015169 Carpinus fangiana HOM05D003486 ORTHO05D004600 2.4e-11 73.2 74 51.4
QL10p048816 Quercus lobata HOM05D003486 ORTHO05D004600 2.4e-11 73.2 70 54.3
MELO3C011660.2 Cucumis melo HOM05D003486 ORTHO05D004600 3.2e-11 72.8 152 35.5
Lj3g0017553 Lotus japonicus HOM05D003486 ORTHO05D004600 3.2e-11 72.8 70 52.9
Dinv44191 Davidia involucrata HOM05D003486 ORTHO05D004600 5.4e-11 72.0 72 52.8
Carub.0005s2615 Capsella rubella HOM05D003486 ORTHO05D004600 7.0e-11 71.6 151 35.8
CsaV3_6G003940 Cucumis sativus L. HOM05D003486 ORTHO05D004600 7.0e-11 71.6 151 35.1
Manes.11G120800 Manihot esculenta HOM05D003486 ORTHO05D004600 7.0e-11 71.6 73 50.7
Prupe.1G194100 Prunus persica HOM05D003486 ORTHO05D004600 7.0e-11 71.6 72 51.4
Zm00001eb078800 Zea mays HOM05D003486 ORTHO05D004600 7.0e-11 71.6 82 50.0
Duzib151G0706 Durio zibethinus HOM05D003486 ORTHO05D004600 9.2e-11 71.2 72 51.4
FAN17G1210 Fragaria x ananassa HOM05D003486 ORTHO05D004600 9.2e-11 71.2 182 34.1
HanXRQChr03g0091131 Helianthus annuus HOM05D003486 ORTHO05D004600 9.2e-11 71.2 72 51.4
MD04G1040400 Malus domestica HOM05D003486 ORTHO05D004600 9.2e-11 71.2 72 51.4
Phvul.011G054400 Phaseolus vulgaris HOM05D003486 ORTHO05D004600 9.2e-11 71.2 77 50.6
TPR.G34255 Trifolium pratense HOM05D003486 ORTHO05D004600 9.2e-11 71.2 72 50.0
VMungo1127G0960 Vigna mungo HOM05D003486 ORTHO05D004600 9.2e-11 71.2 70 52.9
CSS0039550 Camellia sinensis var. sinensis HOM05D003486 ORTHO05D004600 1.2e-10 70.9 72 51.4
CANSAT78G0197 Cannabis sativa HOM05D003486 ORTHO05D004600 1.2e-10 70.9 126 38.9
CDE02G1871 Ceratophyllum demersum HOM05D003486 ORTHO05D004600 1.2e-10 70.9 138 36.2
ECA240G0242 Erigeron canadensis HOM05D003486 ORTHO05D004600 1.2e-10 70.9 72 50.0
Gohir.A10G137350 Gossypium hirsutum HOM05D003486 ORTHO05D004600 1.2e-10 70.9 71 52.1
Gohir.D10G129301 Gossypium hirsutum HOM05D003486 ORTHO05D004600 1.2e-10 70.9 71 52.1
Gorai.011G142600 Gossypium raimondii HOM05D003486 ORTHO05D004600 1.2e-10 70.9 71 52.1
Mapoly0088s0047 Marchantia polymorpha HOM05D003486 ORTHO05D004600 1.2e-10 70.9 77 48.1
Oeu061594.1 Olea europaea HOM05D003486 ORTHO05D004600 1.2e-10 70.9 72 51.4
Potri.007G128300 Populus trichocarpa HOM05D003486 ORTHO05D004600 1.2e-10 70.9 72 51.4
Sabra07G0104700 Salix brachista HOM05D003486 ORTHO05D004600 1.2e-10 70.9 72 51.4
SGA_v2.0_scaffold17G08091 Striga asiatica HOM05D003486 ORTHO05D004600 1.2e-10 70.9 72 51.4
Ciclev10019579m.g Citrus clementina HOM05D003486 ORTHO05D004600 1.6e-10 70.5 72 51.4
Lsat_1_v5_gn_3_115420 Lactuca sativa HOM05D003486 ORTHO05D004600 1.6e-10 70.5 72 50.0
PSO017G7170 Papaver somniferum HOM05D003486 ORTHO05D004600 1.6e-10 70.5 72 51.4
PSO675G4708 Papaver somniferum HOM05D003486 ORTHO05D004600 1.6e-10 70.5 72 51.4
Rhsim02G0076900 Rhododendron simsii HOM05D003486 ORTHO05D004600 1.6e-10 70.5 73 50.7
SalBow3G2610 Salvia bowleyana HOM05D003486 ORTHO05D004600 2.0e-10 70.1 71 52.1
Atru.chr3.1489 Acer truncatum HOM05D003486 ORTHO05D004600 2.7e-10 69.7 72 50.0
Eucgr.A00081 Eucalyptus grandis HOM05D003486 ORTHO05D004600 2.7e-10 69.7 72 50.0
Cc03_g12950 Coffea canephora HOM05D003486 ORTHO05D004600 3.5e-10 69.3 74 51.4
FvH4_4g10800 Fragaria vesca HOM05D003486 ORTHO05D004600 3.5e-10 69.3 104 40.4
FAN12G3204 Fragaria x ananassa HOM05D003486 ORTHO05D004600 3.5e-10 69.3 72 50.0
Glyma.12G052400 Glycine max HOM05D003486 ORTHO05D004600 3.5e-10 69.3 69 52.2
PSO761G0379 Papaver somniferum HOM05D003486 ORTHO05D004600 3.5e-10 69.3 81 42.0
PGR083G0732 Punica granatum HOM05D003486 ORTHO05D004600 3.5e-10 69.3 72 50.0
AT3G59410 Arabidopsis thaliana HOM05D003486 ORTHO05D004600 4.6e-10 68.9 151 34.4
Migut.G01067 Erythranthe guttata HOM05D003486 ORTHO05D004600 4.6e-10 68.9 71 50.7
Sp5g03730 Schrenkiella parvula HOM05D003486 ORTHO05D004600 4.6e-10 68.9 151 34.4
SMO364G0666 Selaginella moellendorffii HOM05D003486 ORTHO05D004600 4.6e-10 68.9 69 50.7
SEGI_08545 Sequoiadendron giganteum HOM05D003486 ORTHO05D004600 4.6e-10 68.9 71 50.7
Actinidia11303 Actinidia chinensis HOM05D003486 ORTHO05D004600 6.0e-10 68.6 72 50.0
ATR0824G223 Amborella trichopoda HOM05D003486 ORTHO05D004600 6.0e-10 68.6 73 49.3
Ca_20787_v3 Cicer arietinum L. HOM05D003486 ORTHO05D004600 6.0e-10 68.6 70 50.0
Medtr4g067160 Medicago truncatula HOM05D003486 ORTHO05D004600 6.0e-10 68.6 70 50.0
RcHm_v2.0_Chr4g0406781 Rosa chinensis HOM05D003486 ORTHO05D004600 6.0e-10 68.6 72 48.6
THA.LOC104803678 Tarenaya hassleriana HOM05D003486 ORTHO05D004600 6.0e-10 68.6 72 50.0
TWI15G0158 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 6.0e-10 68.6 72 50.0
TWI15G0580 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 6.0e-10 68.6 72 50.0
CARHR169800 Cardamine hirsuta HOM05D003486 ORTHO05D004600 7.8e-10 68.2 72 48.6
Lalb_Chr01g0003151 Lupinus albus HOM05D003486 ORTHO05D004600 7.8e-10 68.2 70 50.0
Pp3c26_5370 Physcomitrium patens HOM05D003486 ORTHO05D004600 7.8e-10 68.2 76 47.4
Thecc.04G179700 Theobroma cacao HOM05D003486 ORTHO05D004600 7.8e-10 68.2 72 50.0
arahy.Tifrunner.gnm1.ann1.NQA14U Arachis hypogaea HOM05D003486 ORTHO05D004600 1.0e-09 67.8 70 50.0
arahy.Tifrunner.gnm1.ann1.Q0VLRE Arachis hypogaea HOM05D003486 ORTHO05D004600 1.0e-09 67.8 70 50.0
BcaC07g40457 Brassica carinata HOM05D003486 ORTHO05D004600 1.0e-09 67.8 72 48.6
Thhalv10005755m.g Eutrema salsugineum HOM05D003486 ORTHO05D004600 1.0e-09 67.8 134 35.1
Sc19g0002660 Simmondsia chinensis HOM05D003486 ORTHO05D004600 1.0e-09 67.8 74 48.6
Aqoxy2G04161 Aquilegia oxysepala HOM05D003486 ORTHO05D004600 1.3e-09 67.4 72 50.0
Sed0025407 Sechium edule HOM05D003486 ORTHO05D004600 1.3e-09 67.4 152 33.6
AagrBONN_evm.TU.Sc2ySwM_344.2066 Anthoceros agrestis HOM05D003486 ORTHO05D004600 1.7e-09 67.0 75 46.7
BcaC07g40280 Brassica carinata HOM05D003486 ORTHO05D004600 1.7e-09 67.0 73 50.7
A09p51690 Brassica napus HOM05D003486 ORTHO05D004600 1.7e-09 67.0 73 50.7
C08p34420 Brassica napus HOM05D003486 ORTHO05D004600 1.7e-09 67.0 73 50.7
Sopen11g020460 Solanum pennellii HOM05D003486 ORTHO05D004600 2.3e-09 66.6 153 32.7
EL10Ac3g05937 Beta vulgaris HOM05D003486 ORTHO05D004600 3.0e-09 66.2 74 47.3
AUR62015385 Chenopodium quinoa HOM05D003486 ORTHO05D004600 3.0e-09 66.2 74 47.3
Psat7g214880 Pisum sativum HOM05D003486 ORTHO05D004600 3.0e-09 66.2 70 48.6
Aa31LG10G13760 Aethionema arabicum HOM05D003486 ORTHO05D004600 5.0e-09 65.5 151 33.1
AUR62002305 Chenopodium quinoa HOM05D003486 ORTHO05D004600 5.0e-09 65.5 74 47.3
BcaC02g10121 Brassica carinata HOM05D003486 ORTHO05D004600 1.5e-08 63.9 123 37.4
Lj6A53G34 Lonicera japonica HOM05D003486 ORTHO05D004600 1.9e-08 63.5 60 58.3
Hund03158 Selenicereus undatus HOM05D003486 ORTHO05D004600 1.9e-08 63.5 74 47.3
GSVIVG01010758001 Vitis vinifera HOM05D003486 ORTHO05D004600 1.9e-08 63.5 60 58.3
Haze_01509 Corylus avellana HOM05D003486 ORTHO05D004600 5.6e-08 62.0 60 56.7
HPP92_005931 Vanilla planifolia HOM05D000054 ORTHO05D000286 7.3e-08 61.6 80 45.0
Nn1g09603 Nelumbo nucifera HOM05D003486 ORTHO05D004600 1.2e-07 60.8 61 55.7
Dinv17546 Davidia involucrata HOM05D003486 ORTHO05D004600 3.6e-07 59.3 70 44.3
BolC8t51043H Brassica oleracea HOM05D003486 ORTHO05D004600 1.8e-06 57.0 99 38.4
BraA09t40605Z Brassica rapa HOM05D003486 ORTHO05D004600 1.8e-06 57.0 99 38.4
HPP92_005934 Vanilla planifolia HOM05D000054 ORTHO05D000171 1.8e-06 57.0 97 37.1
DCAR_021780 Daucus carota HOM05D003486 ORTHO05D004600 2.3e-06 56.6 89 39.3
Peaxi162Scf00203g00119 Petunia axillaris HOM05D000134 ORTHO05D000168 2.3e-06 56.6 68 50.0
CBR_g44348 Chara braunii HOM05D004536 ORTHO05D005628 3.1e-06 56.2 71 46.5
Eucgr.H01185 Eucalyptus grandis HOM05D004536 ORTHO05D005628 4.0e-06 55.8 70 47.1
Os03g0130900 Oryza sativa ssp. japonica HOM05D000134 ORTHO05D000168 4.0e-06 55.8 59 50.8
Nitab4.5_0002155g0090 Nicotiana tabacum HOM05D000134 ORTHO05D000168 5.2e-06 55.5 68 48.5
Peaxi162Scf00067g00235 Petunia axillaris HOM05D004536 ORTHO05D005628 5.2e-06 55.5 101 37.6
PRCOL_00004354 Prasinoderma coloniale HOM05D003486 ORTHO05D004600 5.2e-06 55.5 76 39.5
HPP92_005932 Vanilla planifolia HOM05D000054 ORTHO05D000286 5.2e-06 55.5 97 36.1
DCAR_018342 Daucus carota HOM05D004536 ORTHO05D005628 6.8e-06 55.1 70 42.9
MCO05G349 Micromonas commoda HOM05D003486 ORTHO05D004600 6.8e-06 55.1 96 37.5
Aqoxy6G01331 Aquilegia oxysepala HOM05D000038 ORTHO05D000423 8.9e-06 54.7 92 39.1
DCAR_015573 Daucus carota HOM05D000134 ORTHO05D000168 8.9e-06 54.7 105 37.1
Nitab4.5_0001697g0010 Nicotiana tabacum HOM05D004536 ORTHO05D005628 8.9e-06 54.7 101 36.6
Nitab4.5_0009457g0010 Nicotiana tabacum HOM05D004536 ORTHO05D005628 8.9e-06 54.7 101 36.6
QL04p061833 Quercus lobata HOM05D000031 ORTHO05D000030 8.9e-06 54.7 83 43.4
Thecc.01G294900 Theobroma cacao HOM05D004536 ORTHO05D005628 8.9e-06 54.7 101 37.6


User provided reference genes

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