Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14743 Trifolium pratense HOM05D000231 ORTHO05D000132 1.4e-72 276.2 138 100.0
TPR.G26037 Trifolium pratense HOM05D000231 ORTHO05D000132 3.3e-21 105.5 72 76.4
Medtr3g100710 Medicago truncatula HOM05D000231 ORTHO05D000132 2.9e-17 92.4 68 67.6
Psat5g045520 Pisum sativum HOM05D000231 ORTHO05D000132 6.4e-17 91.3 68 64.7
Medtr4g080990 Medicago truncatula HOM05D000231 ORTHO05D000132 2.4e-16 89.4 67 68.7
Ca_15986_v3 Cicer arietinum L. HOM05D004661 ORTHO05D005827 2.3e-14 82.8 66 62.1
Lalb_Chr11g0065101 Lupinus albus HOM05D000231 ORTHO05D000132 3.6e-12 75.5 67 56.7
Phvul.009G143200 Phaseolus vulgaris HOM05D000231 ORTHO05D000132 3.1e-11 72.4 70 51.4
Lalb_Chr08g0242391 Lupinus albus HOM05D000231 ORTHO05D000132 6.8e-11 71.2 68 57.4
Gohir.D05G223900 Gossypium hirsutum HOM05D000231 ORTHO05D000132 2.6e-10 69.3 63 60.3
Gorai.009G231300 Gossypium raimondii HOM05D000231 ORTHO05D000132 2.6e-10 69.3 63 60.3
arahy.Tifrunner.gnm1.ann1.Q1XEB7 Arachis hypogaea HOM05D000231 ORTHO05D000132 5.8e-10 68.2 72 51.4
arahy.Tifrunner.gnm1.ann1.URES5A Arachis hypogaea HOM05D000231 ORTHO05D000132 7.5e-10 67.8 72 51.4
CSS0047916 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 7.5e-10 67.8 87 44.8
Gohir.A05G221200 Gossypium hirsutum HOM05D000231 ORTHO05D000132 7.5e-10 67.8 63 58.7
Duzib116G0763 Durio zibethinus HOM05D000231 ORTHO05D000132 1.3e-09 67.0 67 53.7
Atru.chr13.1046 Acer truncatum HOM05D000231 ORTHO05D000132 1.7e-09 66.6 66 53.0
Glyma.04G092800 Glycine max HOM05D000231 ORTHO05D000132 1.7e-09 66.6 70 51.4
Glyma.14G180300 Glycine max HOM05D000231 ORTHO05D000132 1.7e-09 66.6 69 47.8
Manes.02G146700 Manihot esculenta HOM05D000231 ORTHO05D000132 1.7e-09 66.6 67 50.7
Dinv42636 Davidia involucrata HOM05D000231 ORTHO05D000132 3.7e-09 65.5 89 40.4
CSS0036673 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 6.4e-09 64.7 70 50.0
Thecc.08G068100 Theobroma cacao HOM05D000231 ORTHO05D000132 6.4e-09 64.7 63 55.6
Duzib093G0734 Durio zibethinus HOM05D000231 ORTHO05D000132 1.1e-08 63.9 80 48.8
Solyc04g076040.3 Solanum lycopersicum HOM05D000231 ORTHO05D000132 1.1e-08 63.9 73 49.3
Sopen00g014060 Solanum pennellii HOM05D000231 ORTHO05D000132 1.1e-08 63.9 73 49.3
Lalb_Chr04g0252971 Lupinus albus HOM05D000231 ORTHO05D000132 1.9e-08 63.2 73 47.9
Glyma.06G094600 Glycine max HOM05D000231 ORTHO05D000132 5.4e-08 61.6 67 50.7
Lj1g0020465 Lotus japonicus HOM05D000231 ORTHO05D000132 5.4e-08 61.6 104 40.4
PGSC0003DMG400012900 Solanum tuberosum HOM05D000231 ORTHO05D000132 5.4e-08 61.6 72 47.2
GSVIVG01009139001 Vitis vinifera HOM05D000231 ORTHO05D000132 5.4e-08 61.6 68 47.1
Glyma.18G102000 Glycine max HOM05D000231 ORTHO05D000132 9.2e-08 60.8 100 38.0
Hma1.2p1_0125F.1_g059080 Hydrangea macrophylla HOM05D000231 ORTHO05D000132 9.2e-08 60.8 72 45.8
Haze_22343 Corylus avellana HOM05D000231 ORTHO05D000132 1.2e-07 60.5 70 47.1
VMungo1309G0352 Vigna mungo HOM05D000231 ORTHO05D000132 1.2e-07 60.5 70 48.6
Hma1.2p1_0010F.1_g006980 Hydrangea macrophylla HOM05D000231 ORTHO05D000132 2.1e-07 59.7 69 49.3
QL09p017198 Quercus lobata HOM05D000231 ORTHO05D000132 2.7e-07 59.3 71 45.1
VMungo0647G0233 Vigna mungo HOM05D000231 ORTHO05D000132 3.5e-07 58.9 66 45.5
Glyma.02G212400 Glycine max HOM05D000231 ORTHO05D000132 6.0e-07 58.2 69 43.5
CiPaw.08G054300 Carya illinoinensis HOM05D000231 ORTHO05D000132 7.8e-07 57.8 63 54.0
Nitab4.5_0004578g0030 Nicotiana tabacum HOM05D000231 ORTHO05D000132 1.3e-06 57.0 73 47.9
Actinidia30811 Actinidia chinensis HOM05D000231 ORTHO05D000132 1.7e-06 56.6 74 43.2
Potri.002G103500 Populus trichocarpa HOM05D000231 ORTHO05D000132 1.7e-06 56.6 66 48.5
Sabra02G0081100 Salix brachista HOM05D000231 ORTHO05D000132 1.7e-06 56.6 66 48.5
Lalb_Chr23g0270101 Lupinus albus HOM05D000231 ORTHO05D000132 3.0e-06 55.8 67 44.8
Phvul.008G180000 Phaseolus vulgaris HOM05D000231 ORTHO05D000132 3.0e-06 55.8 66 42.4
CAN.G1658.5 Capsicum annuum HOM05D000231 ORTHO05D000132 5.1e-06 55.1 74 44.6
Dinv44838 Davidia involucrata HOM05D000231 ORTHO05D000132 5.1e-06 55.1 125 36.0
Manes.18G061100 Manihot esculenta HOM05D000231 ORTHO05D000132 5.1e-06 55.1 69 43.5
Gohir.D06G032500 Gossypium hirsutum HOM05D000231 ORTHO05D000132 6.6e-06 54.7 89 38.2
LjContig00408g0019644 Lotus japonicus HOM05D000231 ORTHO05D000132 6.6e-06 54.7 72 41.7
Nn5g29936 Nelumbo nucifera HOM05D000231 ORTHO05D000132 6.6e-06 54.7 85 40.0
Potri.005G157800 Populus trichocarpa HOM05D000231 ORTHO05D000132 6.6e-06 54.7 65 47.7
CiPaw.07G168000 Carya illinoinensis HOM05D000231 ORTHO05D000132 8.6e-06 54.3 67 46.3


User provided reference genes

Program Settings