Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 2.9e-79 298.5 152 100.0
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 3.3e-75 285.0 152 93.4
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 1.6e-74 282.7 152 92.8
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 2.6e-72 275.4 152 91.4
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 9.6e-67 256.9 152 86.2
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 1.3e-66 256.5 152 85.5
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 2.1e-66 255.8 152 86.2
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 9.0e-65 250.4 152 83.6
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 9.0e-65 250.4 152 83.6
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 1.0e-63 246.9 152 82.2
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 1.7e-63 246.1 152 82.9
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 1.3e-58 229.9 156 78.8
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 1.3e-58 229.9 156 80.1
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 2.2e-58 229.2 156 78.8
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 2.2e-58 229.2 156 78.8
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 3.7e-58 228.4 156 80.1
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 4.8e-58 228.0 149 79.9
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 1.8e-57 226.1 149 79.2
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 2.4e-57 225.7 156 80.1
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 4.1e-57 224.9 156 78.2
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 5.3e-57 224.6 155 76.8
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 5.3e-57 224.6 156 77.6
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 5.3e-57 224.6 152 77.6
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 6.9e-57 224.2 150 80.0
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 6.9e-57 224.2 158 77.2
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 1.2e-56 223.4 159 76.1
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 1.2e-56 223.4 156 78.8
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 1.2e-56 223.4 154 79.2
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 1.5e-56 223.0 158 77.2
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 2.6e-56 222.2 159 75.5
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 3.4e-56 221.9 156 76.9
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 1.3e-55 219.9 157 73.9
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 1.7e-55 219.5 156 75.6
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 1.7e-55 219.5 154 74.7
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 2.2e-55 219.2 158 74.1
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 2.2e-55 219.2 156 76.3
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 2.9e-55 218.8 150 77.3
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 8.5e-55 217.2 161 75.2
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 1.1e-54 216.9 157 76.4
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 1.4e-54 216.5 150 78.7
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 1.9e-54 216.1 156 75.0
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 3.2e-54 215.3 156 76.3
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 4.2e-54 214.9 123 87.8
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 4.2e-54 214.9 157 72.6
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 4.2e-54 214.9 156 71.8
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 5.5e-54 214.5 159 74.2
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 9.4e-54 213.8 156 74.4
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 9.4e-54 213.8 156 74.4
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 9.4e-54 213.8 142 78.9
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 1.6e-53 213.0 154 74.0
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 2.1e-53 212.6 156 75.0
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 2.7e-53 212.2 154 75.3
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 2.7e-53 212.2 159 74.2
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.6e-53 211.8 156 73.1
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 4.6e-53 211.5 157 73.2
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 4.6e-53 211.5 157 73.2
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 4.6e-53 211.5 130 83.1
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 1.4e-52 209.9 157 73.2
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 1.8e-52 209.5 157 72.6
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 1.8e-52 209.5 157 72.6
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 1.8e-52 209.5 156 73.1
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 3.0e-52 208.8 153 73.9
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 3.9e-52 208.4 158 70.9
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 3.9e-52 208.4 121 86.0
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.9e-52 208.4 157 71.3
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 3.9e-52 208.4 117 88.0
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 5.1e-52 208.0 156 74.4
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 6.7e-52 207.6 156 73.1
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 6.7e-52 207.6 157 72.0
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 6.7e-52 207.6 157 72.6
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 2.0e-51 206.1 154 73.4
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 2.6e-51 205.7 116 87.9
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 3.3e-51 205.3 153 72.5
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 4.4e-51 204.9 156 71.8
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 5.7e-51 204.5 137 75.9
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 7.4e-51 204.1 153 71.2
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 7.4e-51 204.1 117 87.2
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 1.3e-50 203.4 162 69.1
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 2.2e-50 202.6 159 68.6
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 2.8e-50 202.2 121 81.8
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.7e-50 201.8 158 70.3
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 4.8e-50 201.4 159 70.4
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 4.8e-50 201.4 157 71.3
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 6.3e-50 201.1 156 71.8
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 1.4e-49 199.9 116 82.8
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 4.1e-49 198.4 159 70.4
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 5.3e-49 198.0 160 69.4
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 1.2e-48 196.8 114 89.5
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 1.4e-46 189.9 124 77.4
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 4.4e-43 178.3 126 74.6
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 1.1e-41 173.7 127 75.6
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 2.4e-41 172.6 130 72.3
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 4.1e-41 171.8 121 72.7
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 5.9e-40 167.9 129 69.0
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.0e-39 167.2 121 72.7
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 7.2e-38 161.0 143 66.4
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 9.4e-38 160.6 118 67.8
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 1.6e-37 159.8 156 60.9
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 4.7e-37 158.3 127 67.7
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 6.1e-37 157.9 128 67.2
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 2.3e-36 156.0 104 73.1
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 4.0e-36 155.2 129 65.9
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 1.5e-35 153.3 137 61.3
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 1.3e-34 150.2 128 64.8
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 2.8e-34 149.1 125 64.0
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 6.3e-34 147.9 86 84.9
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 9.1e-33 144.1 141 58.9
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 5.0e-31 138.3 91 74.7
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 7.8e-16 87.8 64 75.0
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 4.7e-13 78.6 108 44.4
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 1.2e-11 73.9 107 41.1
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 1.9e-06 56.6 91 39.6


User provided reference genes

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