Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14696 Trifolium pratense HOM05D003061 ORTHO05D003427 6.5e-63 243.8 117 100.0
TPR.G16115 Trifolium pratense HOM05D001747 ORTHO05D001696 2.7e-24 115.5 115 58.3
TPR.G11712 Trifolium pratense HOM05D003061 ORTHO05D003427 4.1e-17 91.7 47 95.7
Psat4g005080 Pisum sativum HOM05D003061 ORTHO05D003427 1.5e-14 83.2 87 58.6
Ca_01613_v3 Cicer arietinum L. HOM05D003061 ORTHO05D003427 2.8e-13 79.0 47 85.1
Medtr4g133090 Medicago truncatula HOM05D003061 ORTHO05D003427 3.6e-13 78.6 70 60.0
Medtr6g090500 Medicago truncatula HOM05D003061 ORTHO05D003427 3.6e-13 78.6 70 60.0
VMungo1309G0388 Vigna mungo HOM05D003061 ORTHO05D003427 1.1e-12 77.0 47 80.9
arahy.Tifrunner.gnm1.ann1.ERQ0BZ Arachis hypogaea HOM05D003061 ORTHO05D003427 1.4e-12 76.6 47 78.7
Phvul.009G069200 Phaseolus vulgaris HOM05D003061 ORTHO05D003427 1.4e-12 76.6 47 80.9
arahy.Tifrunner.gnm1.ann1.IZ7PYZ Arachis hypogaea HOM05D003061 ORTHO05D003427 1.8e-12 76.3 47 78.7
Glyma.15G269500 Glycine max HOM05D003061 ORTHO05D003427 3.1e-12 75.5 47 78.7
Phvul.010G060300 Phaseolus vulgaris HOM05D003061 ORTHO05D003427 3.1e-12 75.5 47 78.7
Lalb_Chr01g0008151 Lupinus albus HOM05D003061 ORTHO05D003427 5.2e-12 74.7 47 76.6
Lj5g0021224 Lotus japonicus HOM05D003061 ORTHO05D003427 6.8e-12 74.3 47 76.6
TPR.G37052 Trifolium pratense HOM05D003061 ORTHO05D003427 1.2e-11 73.6 70 58.6
Glyma.08G149500 Glycine max HOM05D003061 ORTHO05D003427 2.6e-11 72.4 47 78.7
Psat1g126800 Pisum sativum HOM05D003061 ORTHO05D003427 9.2e-09 63.9 74 55.4
ClCG09G014250 Citrullus lanatus HOM05D003061 ORTHO05D003427 3.5e-08 62.0 41 73.2
CDE08G0304 Ceratophyllum demersum HOM05D003061 ORTHO05D003427 4.6e-08 61.6 44 65.9
MD15G1329500 Malus domestica HOM05D003061 ORTHO05D003427 4.6e-08 61.6 41 65.9
CANSAT54G2368 Cannabis sativa HOM05D003061 ORTHO05D003427 1.0e-07 60.5 50 58.0
ATR1134G015 Amborella trichopoda HOM05D003061 ORTHO05D003427 1.3e-07 60.1 44 59.1
CsaV3_4G004830 Cucumis sativus L. HOM05D003061 ORTHO05D003427 3.0e-07 58.9 41 68.3
CsaV3_UNG188480 Cucumis sativus L. HOM05D003061 ORTHO05D003427 3.0e-07 58.9 41 68.3
FAN19G0910 Fragaria x ananassa HOM05D001941 ORTHO05D003427 3.0e-07 58.9 41 65.9
FAN23G1166 Fragaria x ananassa HOM05D003061 ORTHO05D003427 3.0e-07 58.9 41 65.9
FAN26G1781 Fragaria x ananassa HOM05D001941 ORTHO05D003427 3.0e-07 58.9 41 65.9
FAN26G2224 Fragaria x ananassa HOM05D001941 ORTHO05D003427 3.0e-07 58.9 41 65.9
TAR365G1220 Trochodendron aralioides HOM05D003061 ORTHO05D003427 3.9e-07 58.5 44 61.4
Dinv44171 Davidia involucrata HOM05D003061 ORTHO05D003427 6.6e-07 57.8 44 59.1
FAN28G0342 Fragaria x ananassa HOM05D001941 ORTHO05D003427 6.6e-07 57.8 41 63.4
MELO3C017579.2 Cucumis melo HOM05D003061 ORTHO05D003427 1.1e-06 57.0 41 68.3
Nn1g09671 Nelumbo nucifera HOM05D003061 ORTHO05D003427 1.1e-06 57.0 44 59.1
Sed0013884 Sechium edule HOM05D003061 ORTHO05D003427 1.1e-06 57.0 41 65.9
SEGI_19745 Sequoiadendron giganteum HOM05D003061 ORTHO05D003427 1.9e-06 56.2 44 54.5
ECA247G1891 Erigeron canadensis HOM05D003061 ORTHO05D003427 3.3e-06 55.5 44 52.3
Hma1.2p1_1582F.1_g291980 Hydrangea macrophylla HOM05D003061 ORTHO05D003427 3.3e-06 55.5 44 56.8
Nitab4.5_0000250g0230 Nicotiana tabacum HOM05D003061 ORTHO05D003427 3.3e-06 55.5 53 52.8
Nitab4.5_0001403g0030 Nicotiana tabacum HOM05D003061 ORTHO05D003427 3.3e-06 55.5 53 52.8
CANSAT56G2539 Cannabis sativa HOM05D003061 ORTHO05D003427 4.3e-06 55.1 41 61.0
Nitab4.5_0000210g0140 Nicotiana tabacum HOM05D003061 ORTHO05D003427 5.6e-06 54.7 43 55.8
QL06p050558 Quercus lobata HOM05D003061 ORTHO05D003427 5.6e-06 54.7 47 59.6
CSS0027702 Camellia sinensis var. sinensis HOM05D003061 ORTHO05D003427 7.3e-06 54.3 44 59.1
Lsat_1_v5_gn_9_38740 Lactuca sativa HOM05D003061 ORTHO05D003427 7.3e-06 54.3 44 50.0
Lj9A612T52 Lonicera japonica HOM05D003061 ORTHO05D003427 7.3e-06 54.3 45 55.6
Medtr6g088845 Medicago truncatula HOM05D003061 ORTHO05D262425 7.3e-06 54.3 33 78.8
Peaxi162Scf00001g00572 Petunia axillaris HOM05D003061 ORTHO05D003427 7.3e-06 54.3 44 54.5
RcHm_v2.0_Chr2g0115551 Rosa chinensis HOM05D003061 ORTHO05D003427 7.3e-06 54.3 41 61.0
Solyc03g031690.3 Solanum lycopersicum HOM05D003061 ORTHO05D003427 7.3e-06 54.3 44 54.5
Sopen03g005560 Solanum pennellii HOM05D003061 ORTHO05D003427 7.3e-06 54.3 44 54.5
Actinidia05821 Actinidia chinensis HOM05D003061 ORTHO05D003427 9.5e-06 53.9 44 52.3
CAN.G404.51 Capsicum annuum HOM05D003061 ORTHO05D003427 9.5e-06 53.9 44 54.5
Ca_09160_v3 Cicer arietinum L. HOM05D003061 ORTHO05D003427 9.5e-06 53.9 41 56.1
Ca_30293_v3 Cicer arietinum L. HOM05D003061 ORTHO05D003427 9.5e-06 53.9 41 56.1
Cc07_g14770 Coffea canephora HOM05D003061 ORTHO05D003427 9.5e-06 53.9 44 52.3
ECA232G2506 Erigeron canadensis HOM05D003061 ORTHO05D003427 9.5e-06 53.9 44 50.0
Os06g0697400 Oryza sativa ssp. japonica HOM05D003061 ORTHO05D003427 9.5e-06 53.9 43 58.1
Phvul.007G263200 Phaseolus vulgaris HOM05D003061 ORTHO05D003427 9.5e-06 53.9 41 61.0
PGSC0003DMG400005079 Solanum tuberosum HOM05D003061 ORTHO05D003427 9.5e-06 53.9 44 52.3
TAR626G1686 Trochodendron aralioides HOM05D003061 ORTHO05D003427 9.5e-06 53.9 38 63.2


User provided reference genes

Program Settings