Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14659 Trifolium pratense HOM05D007619 ORTHO05D009522 3.5e-297 1024.2 532 100.0
TPR.G14653 Trifolium pratense HOM05D007619 ORTHO05D009522 1.3e-134 484.2 307 86.3
Medtr1g078380 Medicago truncatula HOM05D007619 ORTHO05D009522 4.8e-121 439.1 308 77.9
Psat4g220960 Pisum sativum HOM05D007619 ORTHO05D009522 5.5e-109 399.1 319 73.7
Phvul.010G077712 Phaseolus vulgaris HOM05D007619 ORTHO05D009522 1.6e-108 397.5 312 72.1
Glyma.10G170300 Glycine max HOM05D007619 ORTHO05D009522 1.4e-107 394.4 313 71.2
Glyma.20G219700 Glycine max HOM05D007619 ORTHO05D009522 3.3e-106 389.8 326 69.3
Lalb_Chr21g0311391 Lupinus albus HOM05D007619 ORTHO05D009522 1.7e-105 387.5 304 72.0
Ca_09970_v3 Cicer arietinum L. HOM05D007619 ORTHO05D009522 1.1e-104 384.8 306 72.5
Lalb_Chr02g0149381 Lupinus albus HOM05D007619 ORTHO05D009522 1.2e-103 381.3 304 70.4
VMungo0720G2770 Vigna mungo HOM05D007619 ORTHO05D009522 4.4e-98 362.8 335 64.8
arahy.Tifrunner.gnm1.ann1.YK6SIT Arachis hypogaea HOM05D007619 ORTHO05D009522 3.1e-96 356.7 309 65.7
arahy.Tifrunner.gnm1.ann1.P2W93U Arachis hypogaea HOM05D007619 ORTHO05D009522 2.7e-95 353.6 309 65.4
Lj5g0000048 Lotus japonicus HOM05D007619 ORTHO05D009522 2.7e-92 343.6 276 72.5
Gorai.004G260400 Gossypium raimondii HOM05D007619 ORTHO05D009522 5.7e-74 282.7 317 53.6
Gohir.1Z049672 Gossypium hirsutum HOM05D007619 ORTHO05D009522 9.8e-74 282.0 317 53.3
Gohir.D08G244101 Gossypium hirsutum HOM05D007619 ORTHO05D009522 9.8e-74 282.0 317 53.3
Thecc.05G206200 Theobroma cacao HOM05D007619 ORTHO05D009522 1.7e-73 281.2 308 53.6
Ciclev10012185m.g Citrus clementina HOM05D007619 ORTHO05D009522 4.9e-73 279.6 312 52.9
RcHm_v2.0_Chr3g0448201 Rosa chinensis HOM05D007619 ORTHO05D009522 8.3e-73 278.9 309 53.1
Cfa006282 Carpinus fangiana HOM05D007619 ORTHO05D009522 9.2e-72 275.4 321 52.3
GSVIVG01019143001 Vitis vinifera HOM05D007619 ORTHO05D009522 7.3e-69 265.8 304 52.3
Haze_04528 Corylus avellana HOM05D007619 ORTHO05D009522 3.6e-68 263.5 312 51.6
TAR633G2353 Trochodendron aralioides HOM05D007619 ORTHO05D009522 4.7e-68 263.1 312 51.6
Eucgr.C02023 Eucalyptus grandis HOM05D007619 ORTHO05D009522 2.3e-67 260.8 306 52.6
Manes.09G184300 Manihot esculenta HOM05D007619 ORTHO05D009522 5.2e-67 259.6 314 51.6
MD04G1241800 Malus domestica HOM05D007619 ORTHO05D009522 2.0e-66 257.7 323 48.6
PSO017G6303 Papaver somniferum HOM05D007619 ORTHO05D009522 2.6e-66 257.3 314 49.7
Atru.chr12.2107 Acer truncatum HOM05D007619 ORTHO05D009522 4.4e-66 256.5 297 51.5
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 9.8e-66 255.4 298 52.3
Hma1.2p1_0220F.1_g093010 Hydrangea macrophylla HOM05D007619 ORTHO05D009522 4.9e-65 253.1 301 51.2
Nn7g37654 Nelumbo nucifera HOM05D007619 ORTHO05D009522 4.9e-65 253.1 309 50.2
Aqoxy2G03954 Aquilegia oxysepala HOM05D007619 ORTHO05D009522 3.2e-64 250.4 312 50.3
FAN09G3963 Fragaria x ananassa HOM05D007619 ORTHO05D009522 1.6e-63 248.1 374 42.8
ClCG11G010990 Citrullus lanatus HOM05D007619 ORTHO05D009522 3.5e-63 246.9 306 52.0
MBI11_g04278_MAGBIO Magnolia biondii HOM05D007619 ORTHO05D009522 6.0e-63 246.1 310 50.6
MELO3C008758.2 Cucumis melo HOM05D007619 ORTHO05D009522 3.9e-62 243.4 307 48.9
FAN14G0392 Fragaria x ananassa HOM05D007619 ORTHO05D009522 2.5e-61 240.7 355 44.2
vmacro10399 Vaccinium macrocarpon HOM05D007619 ORTHO05D009522 1.6e-60 238.0 325 47.4
FAN05G3312 Fragaria x ananassa HOM05D007619 ORTHO05D009522 2.1e-60 237.7 386 41.5
Potri.013G087300 Populus trichocarpa HOM05D007619 ORTHO05D009522 2.0e-58 231.1 315 47.0
Sc09g0001560 Simmondsia chinensis HOM05D007619 ORTHO05D009522 7.5e-58 229.2 306 48.4
PGSC0003DMG400023471 Solanum tuberosum HOM05D007619 ORTHO05D009522 2.2e-57 227.6 303 47.5
Lsat_1_v5_gn_2_17180 Lactuca sativa HOM05D007619 ORTHO05D009522 3.7e-57 226.9 306 45.8
Duzib128G0301 Durio zibethinus HOM05D007619 ORTHO05D009522 1.4e-56 224.9 271 50.2
Peaxi162Scf00156g00417 Petunia axillaris HOM05D007619 ORTHO05D009522 3.2e-56 223.8 305 47.9
CAN.G694.14 Capsicum annuum HOM05D007619 ORTHO05D009522 5.4e-56 223.0 306 47.7
Prupe.6G359200 Prunus persica HOM05D007619 ORTHO05D009522 9.2e-56 222.2 267 50.2
FAN02G4130 Fragaria x ananassa HOM05D007619 ORTHO05D009522 3.5e-55 220.3 321 43.6
Gohir.A08G223800 Gossypium hirsutum HOM05D007619 ORTHO05D009522 4.6e-55 219.9 308 46.8
Solyc05g055830.3 Solanum lycopersicum HOM05D007619 ORTHO05D009522 7.8e-55 219.2 303 46.9
CsaV3_2G009500 Cucumis sativus L. HOM05D007619 ORTHO05D009522 2.3e-54 217.6 306 46.1
Sopen05g034230 Solanum pennellii HOM05D007619 ORTHO05D009522 3.0e-54 217.2 303 46.5
AUR62000347 Chenopodium quinoa HOM05D000031 ORTHO05D009522 1.9e-53 214.5 314 45.5
CiPaw.08G116400 Carya illinoinensis HOM05D007619 ORTHO05D009522 3.3e-53 213.8 272 48.5
Ah.06g195590 Amaranthus hybridus HOM05D000031 ORTHO05D000030 4.3e-53 213.4 323 45.2
Cc09_g03420 Coffea canephora HOM05D007619 ORTHO05D009522 4.3e-53 213.4 309 46.0
Hund27507 Selenicereus undatus HOM05D007619 ORTHO05D009522 7.3e-53 212.6 341 45.5
EL10Ac4g09950 Beta vulgaris HOM05D007619 ORTHO05D009522 1.6e-52 211.5 303 47.5
SGA_v2.0_scaffold340G49291 Striga asiatica HOM05D007619 ORTHO05D009522 4.0e-51 206.8 315 45.7
Sed0001247 Sechium edule HOM05D007619 ORTHO05D009522 2.9e-49 200.7 285 48.1
MSTRG.27407 Avicennia marina HOM05D007619 ORTHO05D009522 8.4e-49 199.1 301 44.9
HanXRQChr07g0190091 Helianthus annuus HOM05D007619 ORTHO05D009522 1.1e-48 198.7 295 44.4
Migut.F01883 Erythranthe guttata HOM05D007619 ORTHO05D009522 1.2e-47 195.3 292 44.9
CDE04G2379 Ceratophyllum demersum HOM05D007619 ORTHO05D009522 2.1e-47 194.5 310 45.2
PSO675G7165 Papaver somniferum HOM05D007619 ORTHO05D009522 2.1e-47 194.5 272 47.1
ECA238G3388 Erigeron canadensis HOM05D000092 ORTHO05D000042 1.5e-45 188.3 287 41.8
Actinidia34778 Actinidia chinensis HOM05D007619 ORTHO05D009522 3.3e-45 187.2 186 54.3
Rhsim09G0130800 Rhododendron simsii HOM05D003215 ORTHO05D003735 7.3e-45 186.0 383 38.1
CDE07G1839 Ceratophyllum demersum HOM05D007619 ORTHO05D009522 6.2e-44 183.0 193 53.9
HPP92_024640 Vanilla planifolia HOM05D001334 ORTHO05D001119 1.8e-43 181.4 283 42.8
Hund21888 Selenicereus undatus HOM05D007619 ORTHO05D009522 6.9e-43 179.5 275 45.8
Nitab4.5_0009285g0010 Nicotiana tabacum HOM05D007619 ORTHO05D009522 2.2e-41 174.5 302 41.7
Nitab4.5_0005183g0010 Nicotiana tabacum HOM05D007619 ORTHO05D009522 1.1e-40 172.2 294 41.2
AUR62006691 Chenopodium quinoa HOM05D007619 ORTHO05D009522 1.6e-39 168.3 313 41.2
Oeu010149.1 Olea europaea HOM05D007619 ORTHO05D009522 1.6e-39 168.3 283 41.0
Zm00001eb394570 Zea mays HOM05D007619 ORTHO05D009522 1.6e-39 168.3 332 37.7
Os01g0100600 Oryza sativa ssp. japonica HOM05D007619 ORTHO05D009522 1.9e-37 161.4 348 35.3
SalBow6G3661 Salvia bowleyana HOM05D007619 ORTHO05D009522 1.9e-37 161.4 296 41.2
Zm00001eb017060 Zea mays HOM05D007619 ORTHO05D009522 9.6e-37 159.1 333 35.7
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-34 152.1 220 44.5
Dinv29118 Davidia involucrata HOM05D007619 ORTHO05D009522 7.6e-34 149.4 271 42.1
Pp3c8_1020 Physcomitrium patens HOM05D007619 ORTHO05D009522 1.4e-32 145.2 185 47.6
Mapoly0093s0084 Marchantia polymorpha HOM05D007619 ORTHO05D009522 4.2e-32 143.7 274 40.5
AagrBONN_evm.TU.Sc2ySwM_117.3969 Anthoceros agrestis HOM05D007619 ORTHO05D009522 3.0e-30 137.5 329 35.9
SEGI_00786 Sequoiadendron giganteum HOM05D007619 ORTHO05D009522 1.5e-29 135.2 128 57.0
Sabra18G0055400 Salix brachista HOM05D007619 ORTHO05D009522 4.8e-28 130.2 353 30.6
MD12G1258700 Malus domestica HOM05D007619 ORTHO05D009522 2.9e-25 120.9 91 65.9
MD12G1258600 Malus domestica HOM05D007619 ORTHO05D009522 1.3e-22 112.1 184 44.0
Oeu040489.1 Olea europaea HOM05D007619 ORTHO05D009522 5.1e-22 110.2 101 57.4
SMO230G0088 Selaginella moellendorffii HOM05D007619 ORTHO05D009522 5.1e-22 110.2 193 39.4
SHI13735 Sapria himalayana HOM05D007619 ORTHO05D009522 1.3e-20 105.5 293 32.8
Cpa.g.sc1371.1 Carica papaya HOM05D007619 ORTHO05D009522 2.5e-16 91.3 193 37.3
Cpa.g.c37388 Carica papaya HOM05D007619 ORTHO05D009522 4.2e-16 90.5 50 84.0
Actinidia38907 Actinidia chinensis HOM05D003215 ORTHO05D003735 1.6e-15 88.6 130 43.8
Sabra18G0055300 Salix brachista HOM05D007619 ORTHO05D009522 1.3e-12 79.0 179 38.0
ATR0609G094 Amborella trichopoda HOM05D007619 ORTHO05D009522 1.4e-08 65.5 177 36.2


User provided reference genes

Program Settings