Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 1.1e-113 413.3 209 100.0
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 5.3e-108 394.4 207 95.2
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 4.2e-105 384.8 209 91.9
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 1.2e-104 383.3 201 94.5
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 2.5e-97 359.0 209 86.1
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 3.2e-97 358.6 208 84.1
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 5.5e-97 357.8 207 83.1
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 1.6e-96 356.3 209 83.7
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 1.6e-96 356.3 205 85.9
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 8.0e-96 354.0 208 82.2
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 8.0e-96 354.0 208 82.2
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 1.5e-94 349.7 205 83.4
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 1.5e-94 349.7 205 83.4
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 9.7e-94 347.1 209 80.9
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 9.7e-94 347.1 208 80.3
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 2.8e-93 345.5 208 83.7
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 4.8e-93 344.7 208 79.8
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 4.8e-93 344.7 200 81.0
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 4.1e-92 341.7 207 79.2
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 4.1e-92 341.7 207 82.1
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 7.0e-92 340.9 207 79.2
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 1.2e-91 340.1 207 78.3
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 2.7e-91 339.0 202 79.2
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 3.5e-91 338.6 208 79.3
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 4.5e-91 338.2 208 78.4
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 4.5e-91 338.2 197 83.8
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 4.5e-91 338.2 208 76.4
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 4.5e-91 338.2 197 82.2
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 7.7e-91 337.4 208 76.0
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 1.3e-90 336.7 189 86.2
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 1.3e-90 336.7 202 77.7
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 1.7e-90 336.3 208 77.9
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 2.2e-90 335.9 205 78.0
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 2.9e-90 335.5 205 79.0
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 2.9e-90 335.5 201 80.6
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 5.0e-90 334.7 205 80.0
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 8.5e-90 334.0 209 74.6
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 1.1e-89 333.6 197 81.2
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 1.5e-89 333.2 201 79.1
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 1.9e-89 332.8 201 79.1
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 3.2e-89 332.0 206 79.1
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 5.5e-89 331.3 208 77.9
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 5.5e-89 331.3 206 75.7
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 7.2e-89 330.9 197 77.7
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 9.4e-89 330.5 200 79.5
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 2.1e-88 329.3 208 76.9
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 2.7e-88 328.9 201 79.1
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 3.6e-88 328.6 211 74.4
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 4.7e-88 328.2 197 80.7
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 6.1e-88 327.8 208 76.4
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 1.0e-87 327.0 197 80.7
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 1.8e-87 326.2 200 79.0
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 3.0e-87 325.5 195 78.5
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 7.5e-86 320.9 199 77.9
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 1.3e-85 320.1 209 74.2
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.7e-85 319.7 193 80.8
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 2.8e-85 318.9 202 76.2
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 3.7e-85 318.5 204 75.0
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 3.7e-85 318.5 208 74.0
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 1.4e-84 316.6 205 74.6
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 1.4e-84 316.6 205 74.6
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 3.1e-84 315.5 209 72.7
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 4.1e-84 315.1 207 74.4
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 5.4e-84 314.7 205 75.6
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 9.1e-84 313.9 208 73.6
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 3.5e-83 312.0 207 73.9
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 5.9e-83 311.2 197 76.1
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 1.7e-82 309.7 207 75.8
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 1.7e-82 309.7 197 76.6
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 1.7e-82 309.7 208 73.1
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 2.9e-82 308.9 206 75.2
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 2.9e-82 308.9 208 71.6
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 3.8e-82 308.5 204 73.0
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 5.0e-82 308.1 208 73.6
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 1.9e-81 306.2 202 74.8
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 2.5e-81 305.8 207 72.5
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 2.5e-81 305.8 207 72.5
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 4.2e-81 305.1 199 75.4
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 2.8e-80 302.4 207 71.5
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 3.6e-80 302.0 207 71.5
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 4.7e-80 301.6 207 71.5
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 4.7e-80 301.6 206 72.8
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 8.0e-80 300.8 171 84.8
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 1.0e-79 300.4 207 70.0
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 1.8e-79 299.7 208 73.1
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 9.8e-78 293.9 207 68.6
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 8.3e-77 290.8 177 81.4
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 1.6e-75 286.6 194 69.1
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 5.9e-75 284.6 192 69.8
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 1.9e-73 279.6 203 66.5
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 8.0e-64 247.7 195 59.0
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 3.4e-62 242.3 150 77.3
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 1.7e-61 240.0 139 84.9
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 2.3e-58 229.6 132 84.1
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 1.4e-55 220.3 231 53.7
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 3.7e-53 212.2 231 53.2
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 4.1e-52 208.8 159 66.7
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 1.2e-51 207.2 136 75.0
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 4.3e-49 198.7 197 50.3
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 4.7e-48 195.3 97 97.9
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 3.2e-44 182.6 155 55.5
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 5.4e-44 181.8 236 47.0
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 3.9e-42 175.6 130 64.6
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 1.1e-39 167.5 191 46.6
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 5.3e-39 165.2 106 80.2
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 6.4e-37 158.3 112 72.3
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.2e-35 154.1 93 81.7
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 1.1e-33 147.5 122 59.8
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 2.8e-32 142.9 98 69.4
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 2.4e-31 139.8 100 69.0
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 6.9e-31 138.3 136 50.0
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 4.5e-30 135.6 139 58.3
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 1.6e-27 127.1 198 37.9
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 4.6e-27 125.6 207 36.2
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 1.9e-20 103.6 71 64.8
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 3.3e-17 92.8 64 65.6
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 2.4e-15 86.7 51 80.4
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 3.1e-15 86.3 52 75.0
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.3e-13 80.9 64 62.5
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 3.2e-12 76.3 60 61.7
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 7.1e-12 75.1 55 61.8
vmacro18566 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 2.1e-11 73.6 51 66.7
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 3.0e-10 69.7 69 56.5
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 1.5e-09 67.4 43 76.7


User provided reference genes

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