Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 7.1e-63 243.8 128 100.0
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 3.8e-56 221.5 128 89.8
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 2.5e-55 218.8 128 89.8
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 7.1e-55 217.2 128 88.3
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 2.1e-54 215.7 123 91.1
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 4.6e-54 214.5 124 89.5
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 1.1e-52 209.9 128 85.9
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 4.3e-52 208.0 123 87.0
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 8.2e-51 203.8 123 86.2
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 1.1e-50 203.4 124 83.9
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 5.8e-49 197.6 123 84.6
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 7.6e-49 197.2 123 82.9
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 7.6e-49 197.2 123 83.7
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 6.3e-43 177.6 113 79.6
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 1.1e-42 176.8 114 78.1
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 1.1e-42 176.8 117 78.6
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 1.4e-42 176.4 113 79.6
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.4e-42 176.4 114 78.9
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 1.8e-42 176.0 113 78.8
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.8e-42 176.0 118 76.3
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.3e-42 174.5 116 77.6
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.3e-42 174.5 116 77.6
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 6.9e-42 174.1 111 79.3
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 6.9e-42 174.1 111 79.3
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 6.9e-42 174.1 114 77.2
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 9.0e-42 173.7 109 81.7
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 9.0e-42 173.7 109 81.7
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 1.5e-41 172.9 113 75.2
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 2.0e-41 172.6 112 81.2
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 2.6e-41 172.2 118 73.7
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 2.6e-41 172.2 118 73.7
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 2.6e-41 172.2 118 72.9
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 2.6e-41 172.2 111 79.3
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 4.5e-41 171.4 121 73.6
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 4.5e-41 171.4 112 76.8
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 1.0e-40 170.2 120 72.5
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.3e-40 169.9 118 72.9
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 1.7e-40 169.5 113 76.1
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 2.9e-40 168.7 112 78.6
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 3.8e-40 168.3 115 73.9
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 3.8e-40 168.3 115 74.8
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 3.8e-40 168.3 121 71.1
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 5.0e-40 167.9 116 76.7
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 6.5e-40 167.5 113 75.2
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 8.5e-40 167.2 118 70.3
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 2.5e-39 165.6 119 73.1
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 2.5e-39 165.6 118 69.5
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.2e-39 164.9 115 74.8
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 5.5e-39 164.5 118 70.3
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 7.2e-39 164.1 109 75.2
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 1.2e-38 163.3 120 71.7
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 2.1e-38 162.5 118 71.2
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 2.1e-38 162.5 107 76.6
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 2.7e-38 162.2 116 71.6
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 2.7e-38 162.2 116 71.6
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 3.6e-38 161.8 116 72.4
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 3.6e-38 161.8 109 77.1
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 7.9e-38 160.6 116 74.1
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 1.0e-37 160.2 115 72.2
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 1.4e-37 159.8 116 71.6
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 1.8e-37 159.5 120 68.3
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 1.5e-36 156.4 122 66.4
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 1.5e-36 156.4 115 68.7
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 2.5e-36 155.6 116 68.1
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 7.4e-36 154.1 104 76.0
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 2.2e-35 152.5 112 70.5
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 2.8e-35 152.1 114 68.4
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.8e-35 152.1 103 73.8
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 6.3e-35 151.0 110 69.1
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 2.4e-34 149.1 107 73.8
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 4.1e-34 148.3 94 75.5
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 1.2e-33 146.7 111 66.7
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 1.5e-33 146.4 112 68.8
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 3.4e-33 145.2 106 72.6
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 7.7e-33 144.1 112 67.9
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 1.3e-32 143.3 104 68.3
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 1.3e-32 143.3 104 67.3
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 1.3e-32 143.3 121 59.5
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.7e-32 142.9 103 71.8
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 1.7e-32 142.9 112 65.2
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 2.9e-32 142.1 104 67.3
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 6.5e-32 141.0 118 62.7
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 3.2e-31 138.7 120 63.3
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 6.1e-30 134.4 116 63.8
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 6.1e-30 134.4 115 64.3
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 4.4e-28 128.3 116 62.1
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 7.4e-28 127.5 114 61.4
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 9.7e-28 127.1 116 58.6
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 1.7e-27 126.3 114 59.6
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 2.2e-27 125.9 113 59.3
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 8.2e-27 124.0 73 83.6
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.8e-26 122.9 73 82.2
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.8e-26 122.9 73 82.2
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 1.5e-25 119.8 77 75.3
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 3.5e-25 118.6 116 56.0
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 3.5e-25 118.6 88 67.0
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 5.9e-25 117.9 114 55.3
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 1.3e-24 116.7 77 75.3
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.7e-24 116.3 118 55.9
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 2.2e-24 115.9 95 62.1
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.2e-24 115.9 118 55.1
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 2.2e-24 115.9 118 55.1
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 2.2e-24 115.9 122 55.7
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 8.5e-24 114.0 116 54.3
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 1.1e-23 113.6 114 55.3
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 1.2e-22 110.2 70 78.6
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 3.3e-20 102.1 106 49.1
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 4.4e-20 101.7 96 57.3
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 5.7e-20 101.3 77 64.9
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 5.7e-20 101.3 73 67.1
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 7.4e-20 100.9 107 51.4
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 9.7e-20 100.5 59 83.1
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 9.7e-20 100.5 59 83.1
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 1.3e-19 100.1 73 67.1
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 1.7e-19 99.8 71 67.6
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 2.2e-19 99.4 109 48.6
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 2.8e-19 99.0 74 64.9
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 2.8e-19 99.0 71 67.6
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 2.8e-19 99.0 71 67.6
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 2.8e-19 99.0 88 65.9
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 6.3e-19 97.8 73 64.4
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 8.2e-19 97.4 107 49.5
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 5.3e-18 94.7 106 45.3
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 1.9e-15 86.3 76 65.8
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 2.5e-15 85.9 102 45.1
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 3.2e-15 85.5 72 54.2
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 6.8e-13 77.8 94 41.5
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 1.8e-10 69.7 43 79.1
FAN03G1360 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.9e-07 59.7 57 50.9
FAN06G1951 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.6e-06 55.5 103 37.9


User provided reference genes

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