Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14544 Trifolium pratense HOM05D000007 ORTHO05D000017 9.3e-103 377.1 221 100.0
TPR.G27494 Trifolium pratense HOM05D000007 ORTHO05D000017 9.5e-39 164.5 88 95.5
TPR.G30455 Trifolium pratense HOM05D000007 ORTHO05D000017 3.0e-37 159.5 90 90.0
Psat1g175680 Pisum sativum HOM05D000007 ORTHO05D000017 1.4e-29 134.0 90 80.0
Ca_00728_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 1.8e-29 133.7 94 79.8
Medtr2g026010 Medicago truncatula HOM05D000007 ORTHO05D000017 1.0e-24 117.9 90 68.9
Medtr8g099460 Medicago truncatula HOM05D000007 ORTHO05D000017 8.1e-22 108.2 92 68.5
Medtr2g028110 Medicago truncatula HOM05D000007 ORTHO05D000017 1.4e-21 107.5 90 65.6
Medtr1g068835 Medicago truncatula HOM05D000007 ORTHO05D000017 2.3e-21 106.7 91 70.3
Medtr2g022170 Medicago truncatula HOM05D000007 ORTHO05D000017 4.0e-21 105.9 87 66.7
Medtr1g068905 Medicago truncatula HOM05D000007 ORTHO05D000017 5.2e-21 105.5 91 68.1
Lj6g0017026 Lotus japonicus HOM05D000007 ORTHO05D000017 8.9e-21 104.8 105 60.0
Medtr1g068875 Medicago truncatula HOM05D000007 ORTHO05D000017 5.8e-20 102.1 101 63.4
Medtr2g031640 Medicago truncatula HOM05D000007 ORTHO05D000017 1.7e-19 100.5 92 64.1
MD05G1358500 Malus domestica HOM05D000007 ORTHO05D000017 8.3e-19 98.2 103 58.3
arahy.Tifrunner.gnm1.ann1.DDZ1HR Arachis hypogaea HOM05D000007 ORTHO05D000017 1.9e-18 97.1 104 53.8
arahy.Tifrunner.gnm1.ann1.F3ZHRM Arachis hypogaea HOM05D000007 ORTHO05D000017 1.9e-18 97.1 104 53.8
MD10G1332600 Malus domestica HOM05D000007 ORTHO05D000017 5.4e-18 95.5 103 56.3
Medtr0667s0010 Medicago truncatula HOM05D000007 ORTHO05D000017 1.2e-17 94.4 92 62.0
Medtr2g021050 Medicago truncatula HOM05D000007 ORTHO05D000017 1.6e-17 94.0 78 69.2
Glyma.09G010600 Glycine max HOM05D000007 ORTHO05D000017 2.1e-17 93.6 92 59.8
Glyma.15G115100 Glycine max HOM05D000007 ORTHO05D000017 2.7e-17 93.2 92 62.0
Medtr2g031680 Medicago truncatula HOM05D000007 ORTHO05D000017 2.7e-17 93.2 91 58.2
Cfa000091 Carpinus fangiana HOM05D000007 ORTHO05D000017 6.0e-17 92.0 92 57.6
Medtr2g425980 Medicago truncatula HOM05D000007 ORTHO05D000017 1.3e-16 90.9 88 59.1
Haze_06950 Corylus avellana HOM05D000007 ORTHO05D000017 2.3e-16 90.1 92 56.5
Prupe.4G009600 Prunus persica HOM05D000007 ORTHO05D000017 3.0e-16 89.7 103 54.4
FAN21G2540 Fragaria x ananassa HOM05D000007 ORTHO05D000017 3.9e-16 89.4 103 54.4
RcHm_v2.0_Chr5g0001381 Rosa chinensis HOM05D000007 ORTHO05D000017 3.9e-16 89.4 103 54.4
FvH4_3g00900 Fragaria vesca HOM05D000007 ORTHO05D000017 6.6e-16 88.6 103 54.4
FAN25G3412 Fragaria x ananassa HOM05D000007 ORTHO05D000017 6.6e-16 88.6 103 54.4
Medtr2g028130 Medicago truncatula HOM05D000007 ORTHO05D000017 8.6e-16 88.2 79 63.3
Medtr2g024110 Medicago truncatula HOM05D000007 ORTHO05D000017 1.1e-15 87.8 78 65.4
Medtr2g426060 Medicago truncatula HOM05D000007 ORTHO05D000017 2.5e-15 86.7 96 56.2
Medtr2g426090 Medicago truncatula HOM05D000007 ORTHO05D000017 2.5e-15 86.7 79 62.0
Medtr7g110360 Medicago truncatula HOM05D000007 ORTHO05D000017 4.3e-15 85.9 94 58.5
Medtr3g083010 Medicago truncatula HOM05D000007 ORTHO05D000017 5.6e-15 85.5 83 60.2
Lj4g0008928 Lotus japonicus HOM05D000007 ORTHO05D000017 7.3e-15 85.1 102 52.0
CiPaw.09G103200 Carya illinoinensis HOM05D000007 ORTHO05D000017 9.5e-15 84.7 92 55.4
Ca_21036_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 9.5e-15 84.7 101 49.5
Medtr2g031720 Medicago truncatula HOM05D000007 ORTHO05D000017 9.5e-15 84.7 78 57.7
VMungo1215G0255 Vigna mungo HOM05D000007 ORTHO05D000017 9.5e-15 84.7 90 52.2
Haze_06942 Corylus avellana HOM05D000007 ORTHO05D000017 1.6e-14 84.0 92 51.1
Lalb_Chr20g0119291 Lupinus albus HOM05D000007 ORTHO05D000017 2.1e-14 83.6 102 51.0
Medtr4g006270 Medicago truncatula HOM05D000007 ORTHO05D000017 2.1e-14 83.6 90 54.4
VMungo1127G0265 Vigna mungo HOM05D000007 ORTHO05D000017 2.8e-14 83.2 90 50.0
Phvul.003G084100 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 6.2e-14 82.0 90 51.1
Medtr4g070550 Medicago truncatula HOM05D000007 ORTHO05D000017 8.1e-14 81.6 100 55.0
Medtr2g024100 Medicago truncatula HOM05D000007 ORTHO05D000017 1.4e-13 80.9 88 62.5
Glyma.17G008200 Glycine max HOM05D000007 ORTHO05D000017 1.8e-13 80.5 92 52.2
Medtr2g028140 Medicago truncatula HOM05D000007 ORTHO05D000017 1.8e-13 80.5 106 55.7
Glyma.07G265800 Glycine max HOM05D000007 ORTHO05D000017 3.1e-13 79.7 91 52.7
Psat4g004720 Pisum sativum HOM05D000007 ORTHO05D000017 4.0e-13 79.3 101 46.5
Eucgr.E03976 Eucalyptus grandis HOM05D000007 ORTHO05D000017 5.2e-13 79.0 95 49.5
Medtr2g025420 Medicago truncatula HOM05D000007 ORTHO05D000017 5.2e-13 79.0 84 57.1
Medtr4g133170 Medicago truncatula HOM05D000007 ORTHO05D000017 5.2e-13 79.0 101 47.5
QL05p069347 Quercus lobata HOM05D000007 ORTHO05D000017 8.9e-13 78.2 92 50.0
VMungo1080G0340 Vigna mungo HOM05D000007 ORTHO05D000017 1.2e-12 77.8 90 48.9
ClCG01G010140 Citrullus lanatus HOM05D000007 ORTHO05D000017 1.5e-12 77.4 103 42.7
Medtr2g426070 Medicago truncatula HOM05D000007 ORTHO05D000017 2.0e-12 77.0 93 52.7
MELO3C021691.2 Cucumis melo HOM05D000007 ORTHO05D000017 3.4e-12 76.3 103 42.7
CiPaw.10G078600 Carya illinoinensis HOM05D000007 ORTHO05D000017 4.4e-12 75.9 92 48.9
CANSAT56G1762 Cannabis sativa HOM05D000007 ORTHO05D000017 5.8e-12 75.5 103 46.6
Medtr2g426020 Medicago truncatula HOM05D000007 ORTHO05D000017 5.8e-12 75.5 83 56.6
CsaV3_1G017240 Cucumis sativus L. HOM05D000007 ORTHO05D000017 9.9e-12 74.7 103 41.7
CSS0049080 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 4.9e-11 72.4 96 51.0
Medtr2g028160 Medicago truncatula HOM05D000007 ORTHO05D000017 4.9e-11 72.4 84 53.6
Medtr2g031700 Medicago truncatula HOM05D000007 ORTHO05D000017 1.4e-10 70.9 91 50.5
Duzib160G0463 Durio zibethinus HOM05D000007 ORTHO05D000017 2.4e-10 70.1 92 45.7
Sed0024435 Sechium edule HOM05D000007 ORTHO05D000017 5.4e-10 68.9 103 40.8
Medtr1g068860 Medicago truncatula HOM05D000007 ORTHO05D000017 9.2e-10 68.2 90 50.0
Dinv30807 Davidia involucrata HOM05D000007 ORTHO05D000017 1.6e-09 67.4 94 46.8
Gohir.D06G160200 Gossypium hirsutum HOM05D000007 ORTHO05D000017 2.7e-09 66.6 89 48.3
Potri.006G013000 Populus trichocarpa HOM05D000007 ORTHO05D000017 3.5e-09 66.2 99 42.4
Thecc.06G234200 Theobroma cacao HOM05D000007 ORTHO05D000017 3.5e-09 66.2 92 46.7
EL10As6g23636 Beta vulgaris HOM05D000007 ORTHO05D000017 4.6e-09 65.9 83 47.0
COL.COLO4_06128 Corchorus olitorius HOM05D000007 ORTHO05D000017 4.6e-09 65.9 79 53.2
COL.COLO4_31895 Corchorus olitorius HOM05D000007 ORTHO05D000017 6.0e-09 65.5 92 47.8
Gorai.010G186900 Gossypium raimondii HOM05D000007 ORTHO05D000017 1.0e-08 64.7 89 47.2
Peaxi162Scf00597g00511 Petunia axillaris HOM05D000007 ORTHO05D000017 2.3e-08 63.5 89 49.4
Sabra16G0002800 Salix brachista HOM05D000007 ORTHO05D000017 2.3e-08 63.5 93 45.2
Sabra16G0015300 Salix brachista HOM05D000007 ORTHO05D000017 2.3e-08 63.5 93 45.2
Rhsim13G0145100 Rhododendron simsii HOM05D000007 ORTHO05D000017 5.1e-08 62.4 93 45.2
Solyc01g008660.4 Solanum lycopersicum HOM05D000007 ORTHO05D000017 5.1e-08 62.4 87 44.8
Sopen01g004180 Solanum pennellii HOM05D000007 ORTHO05D000017 5.1e-08 62.4 87 44.8
AUR62012551 Chenopodium quinoa HOM05D000007 ORTHO05D000017 6.6e-08 62.0 92 45.7
Peaxi162Scf00597g00417 Petunia axillaris HOM05D000007 ORTHO05D000017 8.6e-08 61.6 90 46.7
Nitab4.5_0013904g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.1e-07 61.2 89 43.8
Rhsim11G0019900 Rhododendron simsii HOM05D000007 ORTHO05D000017 1.1e-07 61.2 98 44.9
VMungo0251G3437 Vigna mungo HOM05D000007 ORTHO05D000017 1.1e-07 61.2 80 43.8
Actinidia26854 Actinidia chinensis HOM05D000007 ORTHO05D000017 1.5e-07 60.8 91 45.1
Lj2P693T12 Lonicera japonica HOM05D000007 ORTHO05D000017 1.5e-07 60.8 95 42.1
Peaxi162Scf00231g00224 Petunia axillaris HOM05D000007 ORTHO05D000017 1.5e-07 60.8 99 44.4
vmacro00292 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 1.5e-07 60.8 100 43.0
vmacro00299 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 1.5e-07 60.8 100 43.0
AUR62014647 Chenopodium quinoa HOM05D000007 ORTHO05D000017 1.9e-07 60.5 91 46.2
Sc05g0008370 Simmondsia chinensis HOM05D000007 ORTHO05D000017 1.9e-07 60.5 85 48.2
Hma1.2p1_0127F.1_g059580 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 2.5e-07 60.1 92 46.7
Dinv11914 Davidia involucrata HOM05D000007 ORTHO05D000017 3.3e-07 59.7 80 50.0
Potri.006G013200 Populus trichocarpa HOM05D000007 ORTHO05D000017 3.3e-07 59.7 93 44.1
Duzib192G0105 Durio zibethinus HOM05D000007 ORTHO05D000017 4.3e-07 59.3 92 45.7
PGSC0003DMG400017998 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.3e-07 59.3 87 43.7
CANSAT56G1116 Cannabis sativa HOM05D000007 ORTHO05D000017 5.6e-07 58.9 80 47.5
Potri.010G154700 Populus trichocarpa HOM05D000007 ORTHO05D000017 5.6e-07 58.9 93 43.0
Potri.016G012500 Populus trichocarpa HOM05D000007 ORTHO05D000017 5.6e-07 58.9 93 43.0
RhsimUnG0110700 Rhododendron simsii HOM05D000007 ORTHO05D000017 5.6e-07 58.9 90 48.9
Thecc.06G108600 Theobroma cacao HOM05D000007 ORTHO05D000017 5.6e-07 58.9 97 42.3
CSS0038812 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 7.3e-07 58.5 97 43.3
CANSAT56G0960 Cannabis sativa HOM05D000007 ORTHO05D000017 7.3e-07 58.5 90 43.3
AUR62016933 Chenopodium quinoa HOM05D000007 ORTHO05D000017 7.3e-07 58.5 105 42.9
CSS0050410 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 9.6e-07 58.2 97 43.3
Haze_06948 Corylus avellana HOM05D000007 ORTHO05D000017 9.6e-07 58.2 102 44.1
Dinv43784 Davidia involucrata HOM05D001290 ORTHO05D001180 9.6e-07 58.2 79 49.4
Oeu047068.1 Olea europaea HOM05D000007 ORTHO05D000017 9.6e-07 58.2 78 51.3
Peaxi162Scf00231g00013 Petunia axillaris HOM05D000007 ORTHO05D000017 1.2e-06 57.8 86 45.3
Medtr2g025995 Medicago truncatula HOM05D027594 ORTHO05D000017 1.6e-06 57.4 51 64.7
Actinidia09174 Actinidia chinensis HOM05D000007 ORTHO05D000017 2.1e-06 57.0 97 43.3
CiPaw.09G103100 Carya illinoinensis HOM05D000007 ORTHO05D000017 2.1e-06 57.0 102 45.1
Peaxi162Scf00231g00028 Petunia axillaris HOM05D000007 ORTHO05D000017 2.1e-06 57.0 87 47.1
Haze_06947 Corylus avellana HOM05D000007 ORTHO05D000017 2.8e-06 56.6 102 42.2
COL.COLO4_06115 Corchorus olitorius HOM05D000007 ORTHO05D000017 3.6e-06 56.2 79 48.1
Lj2P928T12 Lonicera japonica HOM05D000007 ORTHO05D000017 3.6e-06 56.2 76 46.1
Lj2P943T5 Lonicera japonica HOM05D000007 ORTHO05D000017 3.6e-06 56.2 76 46.1
Peaxi162Scf00597g00053 Petunia axillaris HOM05D000007 ORTHO05D000017 4.7e-06 55.8 86 45.3
Medtr5g083940 Medicago truncatula HOM05D000007 ORTHO05D000017 6.2e-06 55.5 43 72.1
SGA_v2.0_scaffold7G03755 Striga asiatica HOM05D000007 ORTHO05D000017 6.2e-06 55.5 69 53.6
CAN.G1597.1 Capsicum annuum HOM05D000007 ORTHO05D000017 8.1e-06 55.1 89 44.9
CAN.G1597.2 Capsicum annuum HOM05D000007 ORTHO05D000017 8.1e-06 55.1 89 44.9
CAN.G4685.1 Capsicum annuum HOM05D000007 ORTHO05D000017 8.1e-06 55.1 89 44.9
SGA_v2.0_scaffold549G52862 Striga asiatica HOM05D000007 ORTHO05D000017 8.1e-06 55.1 66 57.6


User provided reference genes

Program Settings