Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1454 Trifolium pratense HOM05D021040 ORTHO05D015712 1.8e-113 412.5 201 100.0
TPR.G35381 Trifolium pratense HOM05D021040 ORTHO05D015712 8.0e-69 264.2 168 79.8
TPR.G20992 Trifolium pratense HOM05D021040 ORTHO05D015712 6.9e-20 101.7 119 41.2
TPR.G13840 Trifolium pratense HOM05D001780 ORTHO05D005322 7.6e-19 98.2 95 60.0
TPR.G39142 Trifolium pratense HOM05D000003 ORTHO05D015712 1.4e-17 94.0 215 30.2
TPR.G21712 Trifolium pratense HOM05D021040 ORTHO05D015712 2.4e-12 76.6 122 33.6
Atru.chr8.1143 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-10 70.5 213 28.6
AUR62008577 Chenopodium quinoa HOM05D000344 ORTHO05D005296 2.2e-10 70.1 228 26.3
Atru.chr8.782 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-09 67.0 221 27.6
Atru.chr2.2490 Acer truncatum HOM05D000003 ORTHO05D000004 3.2e-09 66.2 219 25.6
CiPaw.14G093100 Carya illinoinensis HOM05D000003 ORTHO05D000004 7.1e-09 65.1 129 29.5
Medtr5g078690 Medicago truncatula HOM05D021040 ORTHO05D015712 1.2e-08 64.3 164 28.7
Atru.chr2.1340 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-08 63.9 132 31.1
Atru.chr3.2538 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-08 63.9 136 30.1
Atru.chr6.748 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-08 63.9 121 34.7
Medtr3g110000 Medicago truncatula HOM05D058854 ORTHO05D015712 1.6e-08 63.9 92 32.6
Atru.chr3.1005 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-08 63.5 209 28.7
Atru.chr6.889 Acer truncatum HOM05D000003 ORTHO05D000004 2.1e-08 63.5 192 31.8
Atru.chr9.1299 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-08 63.5 134 31.3
Atru.chr2.176 Acer truncatum HOM05D000003 ORTHO05D000167 6.0e-08 62.0 130 33.1
Atru.chr3.1273 Acer truncatum HOM05D000003 ORTHO05D000167 7.9e-08 61.6 148 28.4
Atru.chr4.2041 Acer truncatum HOM05D000003 ORTHO05D000167 1.0e-07 61.2 212 25.0
Psat6g228600 Pisum sativum HOM05D048163 ORTHO05D016463 1.0e-07 61.2 122 28.7
Atru.chr10.2102 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-07 60.8 179 24.6
Atru.chr2.49 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-07 60.8 217 27.6
CiPaw.07G069100 Carya illinoinensis HOM05D000003 ORTHO05D000167 1.3e-07 60.8 178 27.0
Atru.chr11.887 Acer truncatum HOM05D000003 ORTHO05D000167 1.8e-07 60.5 215 25.6
Atru.chr9.909 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-07 60.5 144 28.5
Atru.chr11.167 Acer truncatum HOM05D000003 ORTHO05D000006 2.3e-07 60.1 220 25.0
Atru.chr11.1731 Acer truncatum HOM05D000003 ORTHO05D000167 3.0e-07 59.7 209 25.4
Medtr1g055405 Medicago truncatula HOM05D002411 ORTHO05D002564 3.0e-07 59.7 89 32.6
Atru.chr2.108 Acer truncatum HOM05D000003 ORTHO05D000004 3.9e-07 59.3 210 27.1
FvH4_2g19503 Fragaria vesca HOM05D000003 ORTHO05D006737 3.9e-07 59.3 185 23.2
Atru.chr6.1037 Acer truncatum HOM05D000003 ORTHO05D000022 5.1e-07 58.9 97 36.1
CiPaw.16G041700 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.1e-07 58.9 125 28.8
Medtr1g033950 Medicago truncatula HOM05D000003 ORTHO05D012297 5.1e-07 58.9 124 28.2
CiPaw.08G120100 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.7e-07 58.5 126 29.4
Atru.chr2.2033 Acer truncatum HOM05D000003 ORTHO05D000167 8.7e-07 58.2 208 23.1
Sed0006726 Sechium edule HOM05D000003 ORTHO05D000167 8.7e-07 58.2 126 31.0
Sed0017531 Sechium edule HOM05D000003 ORTHO05D000126 8.7e-07 58.2 125 29.6
Atru.chr13.2526 Acer truncatum HOM05D000003 ORTHO05D000167 1.1e-06 57.8 178 28.7
Atru.chr9.146 Acer truncatum HOM05D000003 ORTHO05D000167 1.1e-06 57.8 212 25.0
Atru.chr8.1648 Acer truncatum HOM05D000003 ORTHO05D000167 1.5e-06 57.4 208 25.5
Atru.chr8.67 Acer truncatum HOM05D000003 ORTHO05D000167 1.5e-06 57.4 209 24.9
Atru.chr2.931 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-06 57.0 198 25.8
Atru.chr9.304 Acer truncatum HOM05D000003 ORTHO05D000167 1.9e-06 57.0 112 33.0
Medtr1g041635 Medicago truncatula HOM05D021040 ORTHO05D015712 1.9e-06 57.0 167 27.5
Atru.chr2.1954 Acer truncatum HOM05D000003 ORTHO05D000167 2.5e-06 56.6 135 31.1
Atru.chr7.1974 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-06 56.6 100 32.0
Atru.chr10.114 Acer truncatum HOM05D000003 ORTHO05D000167 3.3e-06 56.2 128 32.8
Atru.chr10.97 Acer truncatum HOM05D000003 ORTHO05D000167 3.3e-06 56.2 128 32.8
Atru.chr4.1218 Acer truncatum HOM05D000003 ORTHO05D000167 3.3e-06 56.2 220 27.7
CSS0031955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 3.3e-06 56.2 217 25.3
CiPaw.15G062400 Carya illinoinensis HOM05D000003 ORTHO05D000167 3.3e-06 56.2 171 28.1
TPR.G35485 Trifolium pratense HOM05D039754 ORTHO05D015712 3.3e-06 56.2 103 33.0
Sed0012627 Sechium edule HOM05D000003 ORTHO05D000004 7.4e-06 55.1 126 28.6
Atru.chr1.3159 Acer truncatum HOM05D000003 ORTHO05D000167 9.6e-06 54.7 150 26.0
Atru.chr5.1667 Acer truncatum HOM05D000003 ORTHO05D000004 9.6e-06 54.7 199 25.6
Atru.chr8.183 Acer truncatum HOM05D000003 ORTHO05D000167 9.6e-06 54.7 162 25.3
Atru.chr8.265 Acer truncatum HOM05D000003 ORTHO05D000167 9.6e-06 54.7 162 25.3


User provided reference genes

Program Settings