Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14519 Trifolium pratense HOM05D014681 ORTHO05D006373 3.8e-232 807.7 395 100.0
TPR.G14054 Trifolium pratense HOM05D014681 ORTHO05D006373 4.8e-150 535.0 359 72.1
TPR.G29272 Trifolium pratense HOM05D020749 ORTHO05D006373 1.2e-71 274.6 228 56.6
TPR.G36100 Trifolium pratense HOM05D014681 ORTHO05D006373 2.0e-71 273.9 266 49.6
TPR.G22357 Trifolium pratense HOM05D003261 ORTHO05D004230 2.1e-60 237.3 137 84.7
TPR.G20500 Trifolium pratense HOM05D014681 ORTHO05D006373 5.6e-50 202.6 148 62.8
TPR.G20316 Trifolium pratense HOM05D014681 ORTHO05D006373 1.3e-38 164.9 218 45.4
VMungo0251G1913 Vigna mungo HOM05D008347 ORTHO05D006373 2.9e-30 137.1 386 24.9
TPR.G39296 Trifolium pratense HOM05D014681 ORTHO05D006373 7.1e-29 132.5 127 52.0
AUR62035164 Chenopodium quinoa HOM05D008347 ORTHO05D006373 9.3e-29 132.1 385 28.3
AUR62024102 Chenopodium quinoa HOM05D008347 ORTHO05D006373 7.9e-28 129.0 393 26.7
VMungo1299G0001 Vigna mungo HOM05D008347 ORTHO05D006373 7.4e-26 122.5 383 23.5
Ca_06761_v3 Cicer arietinum L. HOM05D008347 ORTHO05D006373 1.1e-24 118.6 315 26.0
VMungo1383G0244 Vigna mungo HOM05D008347 ORTHO05D006373 3.2e-21 107.1 343 24.5
TPR.G40122 Trifolium pratense HOM05D014681 ORTHO05D006373 1.2e-20 105.1 144 47.2
EL10Ac1g01891 Beta vulgaris HOM05D008347 ORTHO05D006373 2.3e-19 100.9 384 23.7
EL10Ac8g20301 Beta vulgaris HOM05D008347 ORTHO05D006373 5.1e-19 99.8 309 25.2
AUR62034037 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.1e-18 98.6 253 26.5
EL10Ac4g08035 Beta vulgaris HOM05D008347 ORTHO05D006373 1.5e-18 98.2 309 25.2
EL10Ac8g20298 Beta vulgaris HOM05D008347 ORTHO05D006373 1.9e-18 97.8 354 25.1
AUR62039428 Chenopodium quinoa HOM05D008347 ORTHO05D006373 4.8e-17 93.2 356 24.4
EL10Ac6g13718 Beta vulgaris HOM05D008347 ORTHO05D006373 1.1e-16 92.0 231 26.0
AUR62024387 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.8e-16 91.3 351 24.8
AUR62036520 Chenopodium quinoa HOM05D008347 ORTHO05D006373 3.1e-16 90.5 351 24.2
AUR62013905 Chenopodium quinoa HOM05D008347 ORTHO05D006373 5.3e-16 89.7 349 24.4
AUR62022722 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.7e-14 84.7 293 23.9
VMungo0331G0159 Vigna mungo HOM05D008347 ORTHO05D006373 1.7e-14 84.7 294 22.1
AUR62006881 Chenopodium quinoa HOM05D008347 ORTHO05D006373 6.5e-14 82.8 354 24.9
EL10Ac1g01624 Beta vulgaris HOM05D008347 ORTHO05D006373 1.1e-13 82.0 359 25.6
Hund11135 Selenicereus undatus HOM05D014069 ORTHO05D000105 1.4e-13 81.6 257 25.3
EL10Ac3g06751 Beta vulgaris HOM05D008347 ORTHO05D006373 1.9e-13 81.3 246 22.8
EL10Ac9g22462 Beta vulgaris HOM05D008347 ORTHO05D006373 9.4e-13 79.0 224 23.7
HanXRQChr14g0434661 Helianthus annuus HOM05D013529 ORTHO05D011573 2.7e-12 77.4 186 30.1
AUR62044448 Chenopodium quinoa HOM05D005322 ORTHO05D011763 7.9e-12 75.9 272 27.2
C07p06990 Brassica napus HOM05D009356 ORTHO05D010353 1.4e-11 75.1 151 30.5
HanXRQChr17g0568721 Helianthus annuus HOM05D013529 ORTHO05D011573 2.3e-11 74.3 188 29.3
THA.LOC104804846 Tarenaya hassleriana HOM05D062396 ORTHO05D006373 2.3e-11 74.3 338 28.1
Ah.10g025060 Amaranthus hybridus HOM05D020495 ORTHO05D017251 5.1e-11 73.2 249 28.5
C04p15140 Brassica napus HOM05D009356 ORTHO05D010353 5.1e-11 73.2 151 29.8
AUR62030750 Chenopodium quinoa HOM05D008347 ORTHO05D006373 8.8e-11 72.4 354 22.6
AUR62044633 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.5e-10 70.9 214 25.7
C02p15580 Brassica napus HOM05D009356 ORTHO05D010353 3.3e-10 70.5 151 28.5
C02p25050 Brassica napus HOM05D009356 ORTHO05D010353 4.3e-10 70.1 149 29.5
AUR62034995 Chenopodium quinoa HOM05D000107 ORTHO05D011763 7.4e-10 69.3 272 26.1
AUR62021930 Chenopodium quinoa HOM05D008347 ORTHO05D006373 9.7e-10 68.9 210 23.8
HanXRQChr12g0366211 Helianthus annuus HOM05D013529 ORTHO05D011573 1.3e-09 68.6 252 25.8
EL10Ac8g20300 Beta vulgaris HOM05D008347 ORTHO05D006373 1.7e-09 68.2 227 23.3
VMungo1127G2249 Vigna mungo HOM05D008347 ORTHO05D006373 1.7e-09 68.2 222 22.1
EL10Ac5g11801 Beta vulgaris HOM05D008347 ORTHO05D006373 3.7e-09 67.0 174 28.7
Hund24804 Selenicereus undatus HOM05D008347 ORTHO05D010196 4.8e-09 66.6 207 29.0
Psat5g111720 Pisum sativum HOM05D014681 ORTHO05D006373 6.3e-09 66.2 96 32.3
EL10Ac1g01468 Beta vulgaris HOM05D008347 ORTHO05D006373 1.4e-08 65.1 174 27.6
AUR62025216 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.4e-08 65.1 238 26.5
AUR62028249 Chenopodium quinoa HOM05D012416 ORTHO05D000016 1.4e-08 65.1 238 26.5
AUR62034621 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.4e-08 65.1 238 26.5
AUR62042040 Chenopodium quinoa HOM05D012416 ORTHO05D000016 1.4e-08 65.1 238 26.5
AUR62044466 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.4e-08 65.1 238 26.5
AUR62044346 Chenopodium quinoa HOM05D012416 ORTHO05D006373 2.4e-08 64.3 178 29.2
EL10Ac4g08425 Beta vulgaris HOM05D009474 ORTHO05D006373 4.1e-08 63.5 312 25.0
EL10Ac3g06648 Beta vulgaris HOM05D009474 ORTHO05D006373 6.9e-08 62.8 249 26.1
EL10Ac4g08475 Beta vulgaris HOM05D009474 ORTHO05D006373 6.9e-08 62.8 225 26.2
TPR.G34414 Trifolium pratense HOM05D014681 ORTHO05D006373 9.1e-08 62.4 86 47.7
EL10Ac4g08745 Beta vulgaris HOM05D009474 ORTHO05D006373 1.2e-07 62.0 312 25.0
EL10Ac7g17386 Beta vulgaris HOM05D009474 ORTHO05D006373 1.2e-07 62.0 223 26.0
TPR.G913 Trifolium pratense HOM05D014681 ORTHO05D006373 1.2e-07 62.0 110 41.8
EL10Ac5g11109 Beta vulgaris HOM05D009474 ORTHO05D006373 2.0e-07 61.2 318 24.8
AUR62031748 Chenopodium quinoa HOM05D012416 ORTHO05D006373 2.0e-07 61.2 241 27.0
EL10Ac9g20913 Beta vulgaris HOM05D009474 ORTHO05D006373 2.6e-07 60.8 313 24.9
EL10Ac8g19408 Beta vulgaris HOM05D009474 ORTHO05D006373 3.4e-07 60.5 312 24.0
EL10As24g24232 Beta vulgaris HOM05D009474 ORTHO05D006373 4.5e-07 60.1 312 24.0
BcaC02g10021 Brassica carinata HOM05D009356 ORTHO05D010353 4.5e-07 60.1 147 25.9
AUR62042837 Chenopodium quinoa HOM05D005322 ORTHO05D011763 4.5e-07 60.1 265 24.2
EL10Ac7g16650 Beta vulgaris HOM05D009474 ORTHO05D006373 7.7e-07 59.3 321 24.6
EL10Ac2g03104 Beta vulgaris HOM05D009474 ORTHO05D006373 1.0e-06 58.9 250 25.6
EL10Ac2g03310 Beta vulgaris HOM05D009474 ORTHO05D006373 1.0e-06 58.9 255 25.1
EL10Ac4g09233 Beta vulgaris HOM05D012416 ORTHO05D006373 1.3e-06 58.5 270 25.6
EL10Ac6g14023 Beta vulgaris HOM05D009474 ORTHO05D006373 1.7e-06 58.2 312 24.4
EL10Ac6g14024 Beta vulgaris HOM05D009474 ORTHO05D006373 1.7e-06 58.2 312 24.4
THA.LOC104820475 Tarenaya hassleriana HOM05D008347 ORTHO05D006373 2.2e-06 57.8 137 24.8
EL10Ac5g11532 Beta vulgaris HOM05D009474 ORTHO05D006373 3.8e-06 57.0 149 31.5
C07p25740 Brassica napus HOM05D009356 ORTHO05D010353 5.0e-06 56.6 139 28.1
BcaC02g11800 Brassica carinata HOM05D009356 ORTHO05D010353 8.5e-06 55.8 147 26.5
Medtr0016s0150 Medicago truncatula HOM05D008107 ORTHO05D010019 8.5e-06 55.8 162 29.0


User provided reference genes

Program Settings