Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14508 Trifolium pratense HOM05D004894 ORTHO05D005689 1.4e-93 346.3 180 100.0
TPR.G21506 Trifolium pratense HOM05D004894 ORTHO05D005689 1.2e-76 290.0 186 84.4
TPR.G36147 Trifolium pratense HOM05D004894 ORTHO05D005689 3.0e-75 285.4 187 84.0
TPR.G12635 Trifolium pratense HOM05D004894 ORTHO05D005689 2.2e-49 199.5 178 62.4
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 2.3e-43 179.5 178 56.7
Medtr4g062290 Medicago truncatula HOM05D004894 ORTHO05D005689 1.7e-41 173.3 178 56.2
TPR.G12614 Trifolium pratense HOM05D004894 ORTHO05D005689 2.9e-38 162.5 178 51.1
TPR.G11233 Trifolium pratense HOM05D004894 ORTHO05D005689 3.6e-36 155.6 180 51.7
TPR.G30772 Trifolium pratense HOM05D004894 ORTHO05D005689 2.2e-33 146.4 180 50.6
TPR.G36461 Trifolium pratense HOM05D004894 ORTHO05D005689 2.0e-31 139.8 152 52.0
Psat0s6062g0040 Pisum sativum HOM05D004894 ORTHO05D005689 6.5e-30 134.8 181 42.5
Psat3g039600 Pisum sativum HOM05D004894 ORTHO05D005689 1.1e-29 134.0 183 44.3
TPR.G12588 Trifolium pratense HOM05D000036 ORTHO05D005689 1.1e-29 134.0 166 48.8
TPR.G22347 Trifolium pratense HOM05D004894 ORTHO05D005689 4.7e-28 128.6 181 42.0
TPR.G30777 Trifolium pratense HOM05D004894 ORTHO05D005689 1.2e-26 124.0 168 43.5
Medtr1g054800 Medicago truncatula HOM05D004894 ORTHO05D005689 3.4e-26 122.5 180 45.6
Medtr1g055290 Medicago truncatula HOM05D004894 ORTHO05D005689 7.5e-26 121.3 182 44.5
TPR.G30770 Trifolium pratense HOM05D004894 ORTHO05D005689 2.2e-25 119.8 169 43.2
Medtr5g081820 Medicago truncatula HOM05D004894 ORTHO05D005689 2.8e-25 119.4 172 41.9
Medtr1g054740 Medicago truncatula HOM05D004894 ORTHO05D005689 4.9e-25 118.6 180 43.9
Medtr4g036790 Medicago truncatula HOM05D004894 ORTHO05D005689 1.8e-24 116.7 180 45.0
Glyma.02G080000 Glycine max HOM05D004894 ORTHO05D005689 2.9e-22 109.4 178 37.6
arahy.Tifrunner.gnm1.ann1.VH20NJ Arachis hypogaea HOM05D004894 ORTHO05D005689 3.8e-22 109.0 178 37.1
Medtr5g081840 Medicago truncatula HOM05D004894 ORTHO05D005689 6.6e-22 108.2 181 41.4
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 1.2e-20 104.0 179 35.8
Psat7g222800 Pisum sativum HOM05D004894 ORTHO05D005689 1.6e-20 103.6 107 52.3
Lalb_Chr19g0130051 Lupinus albus HOM05D004894 ORTHO05D005689 2.1e-20 103.2 180 35.0
Lalb_Chr19g0130071 Lupinus albus HOM05D004894 ORTHO05D005689 2.1e-20 103.2 180 35.0
Lalb_Chr03g0035451 Lupinus albus HOM05D004894 ORTHO05D005689 4.7e-20 102.1 170 39.4
Medtr1g054745 Medicago truncatula HOM05D004894 ORTHO05D005689 8.0e-20 101.3 168 42.3
Glyma.16G164600 Glycine max HOM05D004894 ORTHO05D005689 1.4e-19 100.5 179 38.0
VMungo0464G0707 Vigna mungo HOM05D004894 ORTHO05D005689 1.8e-19 100.1 178 36.5
Medtr6g038010 Medicago truncatula HOM05D004894 ORTHO05D005689 3.0e-19 99.4 174 36.8
TPR.G14498 Trifolium pratense HOM05D004894 ORTHO05D005689 4.0e-19 99.0 175 42.9
Lalb_Chr19g0130151 Lupinus albus HOM05D004894 ORTHO05D005689 6.8e-19 98.2 174 36.8
Lalb_Chr19g0130161 Lupinus albus HOM05D004894 ORTHO05D005689 6.8e-19 98.2 174 36.8
TPR.G9011 Trifolium pratense HOM05D004894 ORTHO05D005689 6.8e-19 98.2 178 36.5
Phvul.004G091800 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 2.6e-18 96.3 178 35.4
Lalb_Chr14g0362611 Lupinus albus HOM05D004894 ORTHO05D005689 4.4e-18 95.5 176 34.7
Medtr1g058550 Medicago truncatula HOM05D004894 ORTHO05D005689 2.9e-17 92.8 164 40.9
Psat1g100960 Pisum sativum HOM05D004894 ORTHO05D005689 2.9e-17 92.8 180 37.8
Lj2g0017521 Lotus japonicus HOM05D004894 ORTHO05D005689 1.8e-16 90.1 175 32.6
Glyma.10G140100 Glycine max HOM05D004894 ORTHO05D005689 1.2e-15 87.4 179 33.5
Lalb_Chr03g0035431 Lupinus albus HOM05D004894 ORTHO05D005689 1.6e-15 87.0 185 35.7
Lalb_Chr03g0035441 Lupinus albus HOM05D004894 ORTHO05D005689 2.0e-15 86.7 183 35.5
Glyma.10G223000 Glycine max HOM05D004894 ORTHO05D005689 2.7e-15 86.3 191 33.0
TPR.G4408 Trifolium pratense HOM05D004894 ORTHO05D005689 2.7e-15 86.3 172 33.1
TPR.G28007 Trifolium pratense HOM05D004894 ORTHO05D005689 4.6e-15 85.5 161 35.4
Lalb_Chr03g0035421 Lupinus albus HOM05D004894 ORTHO05D005689 5.9e-15 85.1 132 42.4
Ca_26810_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 1.0e-14 84.3 108 47.2
Medtr6g037940 Medicago truncatula HOM05D004894 ORTHO05D005689 1.7e-14 83.6 179 32.4
Lalb_Chr03g0035561 Lupinus albus HOM05D004894 ORTHO05D005689 3.0e-14 82.8 177 32.2
Medtr6g037780 Medicago truncatula HOM05D004894 ORTHO05D005689 3.9e-14 82.4 178 34.3
Psat4g130720 Pisum sativum HOM05D004894 ORTHO05D005689 8.6e-14 81.3 163 34.4
Lalb_Chr03g0035581 Lupinus albus HOM05D004894 ORTHO05D005689 1.1e-13 80.9 167 31.1
Glyma.20G168700 Glycine max HOM05D004894 ORTHO05D005689 1.9e-13 80.1 191 30.4
Psat6g191440 Pisum sativum HOM05D004894 ORTHO05D005689 2.5e-13 79.7 133 36.1
Psat6g191960 Pisum sativum HOM05D004894 ORTHO05D005689 3.3e-13 79.3 182 32.4
Medtr6g037920 Medicago truncatula HOM05D004894 ORTHO05D005689 4.3e-13 79.0 150 33.3
Psat6g191520 Pisum sativum HOM05D004894 ORTHO05D005689 4.3e-13 79.0 180 32.2
TWI34G1211 Tripterygium wilfordii HOM05D004894 ORTHO05D005689 4.3e-13 79.0 168 32.1
TPR.G36349 Trifolium pratense HOM05D004894 ORTHO05D005689 5.6e-13 78.6 171 30.4
VMungo0720G1196 Vigna mungo HOM05D004894 ORTHO05D005689 7.3e-13 78.2 176 32.4
Glyma.02G262600 Glycine max HOM05D004894 ORTHO05D005689 1.6e-12 77.0 178 30.9
Glyma.02G262800 Glycine max HOM05D004894 ORTHO05D005689 1.6e-12 77.0 178 30.9
Glyma.02G262900 Glycine max HOM05D004894 ORTHO05D005689 1.6e-12 77.0 178 30.9
Glyma.02G263000 Glycine max HOM05D004894 ORTHO05D005689 1.6e-12 77.0 178 30.9
Medtr6g037820 Medicago truncatula HOM05D004894 ORTHO05D005689 2.1e-12 76.6 179 31.3
Prupe.8G038100 Prunus persica HOM05D004894 ORTHO05D005689 2.1e-12 76.6 140 33.6
Lj5g0011961 Lotus japonicus HOM05D004894 ORTHO05D005689 3.6e-12 75.9 160 33.8
Glyma.02G263100 Glycine max HOM05D004894 ORTHO05D005689 6.2e-12 75.1 178 30.3
Medtr1g018130 Medicago truncatula HOM05D004894 ORTHO05D005689 1.1e-11 74.3 81 51.9
Lalb_Chr02g0141491 Lupinus albus HOM05D004894 ORTHO05D005689 1.8e-11 73.6 185 29.7
arahy.Tifrunner.gnm1.ann1.P5DTJP Arachis hypogaea HOM05D004894 ORTHO05D005689 2.3e-11 73.2 184 32.6
Medtr6g037700 Medicago truncatula HOM05D004894 ORTHO05D005689 2.3e-11 73.2 172 33.1
Phvul.007G082200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 3.1e-11 72.8 177 29.9
Medtr1g098410 Medicago truncatula HOM05D004894 ORTHO05D005689 4.0e-11 72.4 133 33.1
Medtr6g039260 Medicago truncatula HOM05D004894 ORTHO05D005689 1.2e-10 70.9 179 27.4
Glyma.02G262700 Glycine max HOM05D004894 ORTHO05D005689 1.5e-10 70.5 178 29.2
Lalb_Chr03g0035571 Lupinus albus HOM05D004894 ORTHO05D005689 2.0e-10 70.1 178 30.9
Ca_10673_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 2.6e-10 69.7 179 31.3
Medtr6g034800 Medicago truncatula HOM05D004894 ORTHO05D005689 3.4e-10 69.3 180 29.4
Psat2g178280 Pisum sativum HOM05D004894 ORTHO05D005689 3.4e-10 69.3 96 38.5
Psat6g191360 Pisum sativum HOM05D004894 ORTHO05D005689 4.4e-10 68.9 182 30.2
Medtr1g098200 Medicago truncatula HOM05D004894 ORTHO05D005689 5.8e-10 68.6 185 31.4
Medtr1g098400 Medicago truncatula HOM05D004894 ORTHO05D005689 5.8e-10 68.6 185 31.4
Medtr6g037880 Medicago truncatula HOM05D004894 ORTHO05D005689 7.5e-10 68.2 177 27.1
Lalb_Chr19g0130061 Lupinus albus HOM05D004894 ORTHO05D005689 9.8e-10 67.8 169 30.8
Medtr4g065770 Medicago truncatula HOM05D004894 ORTHO05D005689 9.8e-10 67.8 150 32.7
arahy.Tifrunner.gnm1.ann1.56TCJ2 Arachis hypogaea HOM05D004894 ORTHO05D005689 1.7e-09 67.0 174 31.0
Phvul.007G082100 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 1.7e-09 67.0 178 27.0
VMungo0720G2185 Vigna mungo HOM05D004894 ORTHO05D005689 2.2e-09 66.6 160 27.5
QL02p037589 Quercus lobata HOM05D004894 ORTHO05D005689 3.2e-08 62.8 164 27.4
MD10G1032600 Malus domestica HOM05D004894 ORTHO05D005689 4.1e-08 62.4 133 30.1
Glyma.14G020600 Glycine max HOM05D004894 ORTHO05D005689 7.0e-08 61.6 172 29.7
FAN24G3270 Fragaria x ananassa HOM05D004894 ORTHO05D005689 1.2e-07 60.8 170 28.8
Phvul.008G271200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 1.2e-07 60.8 154 30.5
Glyma.14G020900 Glycine max HOM05D004894 ORTHO05D005689 2.0e-07 60.1 170 29.4
QL02p038558 Quercus lobata HOM05D004894 ORTHO05D005689 2.0e-07 60.1 151 27.2
Cfa018299 Carpinus fangiana HOM05D004894 ORTHO05D005689 2.7e-07 59.7 181 28.2
FvH4_2g13220 Fragaria vesca HOM05D004894 ORTHO05D005689 2.7e-07 59.7 170 28.2
Glyma.10G223100 Glycine max HOM05D004894 ORTHO05D005689 3.5e-07 59.3 147 29.9
Lalb_Chr19g0125751 Lupinus albus HOM05D067330 ORTHO05D005689 3.5e-07 59.3 172 29.7
Psat1g101040 Pisum sativum HOM05D004894 ORTHO05D005689 6.0e-07 58.5 117 28.2
Haze_17791 Corylus avellana HOM05D004894 ORTHO05D009560 6.6e-06 55.1 156 28.2


User provided reference genes

Program Settings