Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 3.2e-292 1007.7 509 100.0
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 3.8e-240 834.7 453 88.1
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 4.9e-240 834.3 452 87.8
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 1.4e-231 806.2 451 86.5
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 7.4e-212 740.7 451 76.7
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 1.3e-211 740.0 451 76.3
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 2.6e-209 732.3 451 76.5
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 3.8e-208 728.4 450 74.4
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 2.1e-206 722.6 450 74.2
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 4.3e-204 714.9 433 78.1
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 4.8e-187 658.3 440 69.3
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 1.9e-183 646.4 448 67.4
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 2.1e-182 642.9 421 69.8
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 8.8e-181 637.5 442 67.6
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 7.4e-180 634.4 445 65.4
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 2.8e-179 632.5 444 67.3
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 2.8e-179 632.5 431 67.5
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 6.3e-179 631.3 436 67.7
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 1.8e-178 629.8 432 67.8
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 3.1e-178 629.0 444 66.9
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 4.1e-178 628.6 417 67.4
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 9.1e-178 627.5 415 69.6
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 2.0e-177 626.3 433 68.1
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 3.5e-177 625.5 424 68.4
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 5.9e-177 624.8 442 67.2
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 1.7e-176 623.2 430 66.3
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 2.2e-176 622.9 422 68.0
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 1.9e-175 619.8 414 68.8
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 9.4e-175 617.5 432 67.1
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 2.1e-174 616.3 435 65.1
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 4.7e-174 615.1 443 65.2
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 4.7e-174 615.1 432 66.9
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 6.1e-174 614.8 442 65.4
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 8.0e-174 614.4 425 66.1
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 8.0e-174 614.4 432 66.4
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 2.6e-172 609.4 398 69.8
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 7.5e-172 607.8 416 66.6
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 1.3e-171 607.1 421 67.0
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 2.2e-171 606.3 434 64.5
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 2.8e-171 605.9 419 66.3
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 2.8e-171 605.9 441 63.0
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 1.4e-170 603.6 400 69.5
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.4e-170 603.6 425 65.9
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 4.5e-169 598.6 418 64.8
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 5.9e-169 598.2 422 67.3
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 2.2e-168 596.3 472 60.8
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 2.2e-168 596.3 430 64.2
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 1.9e-167 593.2 430 63.7
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 2.5e-167 592.8 409 66.3
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 2.5e-167 592.8 430 64.0
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 4.2e-167 592.0 438 63.5
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 5.5e-167 591.7 431 63.8
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 5.5e-167 591.7 414 65.5
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 3.0e-165 585.9 423 64.3
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 5.2e-165 585.1 423 63.4
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 3.4e-164 582.4 411 64.7
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 5.7e-164 581.6 436 61.9
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 9.8e-164 580.9 436 62.2
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 1.3e-163 580.5 411 64.5
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 2.2e-163 579.7 424 63.4
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 6.3e-163 578.2 411 63.7
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 1.1e-162 577.4 436 61.9
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 2.4e-162 576.2 423 62.6
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 2.0e-161 573.2 392 67.1
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 7.7e-161 571.2 417 63.8
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 7.7e-161 571.2 374 70.1
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 1.1e-159 567.4 415 64.3
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 7.2e-159 564.7 355 74.1
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 3.4e-156 555.8 436 60.8
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 6.6e-152 541.6 434 58.8
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 8.6e-152 541.2 444 59.2
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 4.3e-151 538.9 448 58.9
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.6e-150 535.8 399 63.7
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 1.2e-148 530.8 425 59.5
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 2.5e-143 513.1 419 56.3
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 9.5e-143 511.1 405 60.2
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 2.1e-142 510.0 436 58.7
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 3.6e-142 509.2 390 59.5
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 8.0e-142 508.1 411 59.4
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 2.3e-141 506.5 434 56.7
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 1.3e-139 500.7 414 57.2
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 2.2e-139 500.0 408 59.3
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 3.5e-137 492.7 434 54.4
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 2.5e-135 486.5 326 67.2
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 3.6e-134 482.6 353 65.2
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 2.6e-132 476.5 334 67.7
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 7.5e-132 474.9 328 66.8
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.2e-130 468.0 407 58.2
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.9e-128 462.6 403 57.8
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.8e-125 453.8 381 59.8
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 3.4e-124 449.5 324 64.2
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 1.5e-119 434.1 324 62.7
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 1.9e-119 433.7 423 50.6
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 8.4e-99 365.2 226 72.1
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 1.3e-91 341.3 235 66.4
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 7.7e-84 315.5 246 64.6
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 1.3e-75 288.1 236 59.7
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 7.2e-74 282.3 197 65.5
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 1.1e-61 241.9 384 37.2
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.1e-53 215.3 130 76.2
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.1e-53 215.3 130 76.2
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 7.2e-50 202.6 181 54.1
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 2.0e-44 184.5 364 33.8
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 1.3e-35 155.2 172 46.5
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 6.1e-33 146.4 173 48.6
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 6.1e-33 146.4 173 48.6
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 2.6e-31 141.0 130 51.5
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 4.3e-26 123.6 70 82.9
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 2.1e-25 121.3 95 56.8
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 6.0e-20 103.2 63 69.8
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 2.1e-17 94.7 75 58.7
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 6.4e-14 83.2 208 31.7
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 5.4e-13 80.1 200 31.0
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 7.1e-13 79.7 203 30.5
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 7.8e-12 76.3 379 20.6
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 5.1e-11 73.6 75 46.7
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 4.9e-06 57.0 77 39.0


User provided reference genes

Program Settings