Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 6.2e-186 654.1 345 100.0
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 2.8e-106 389.4 259 81.9
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 2.8e-98 362.8 275 71.6
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 6.3e-98 361.7 280 72.1
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 1.4e-97 360.5 258 77.1
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 2.9e-95 352.8 275 70.9
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 5.0e-95 352.1 276 69.2
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 2.3e-84 316.6 274 65.7
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 2.7e-72 276.6 284 58.5
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 1.9e-70 270.4 266 59.4
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 9.5e-70 268.1 271 58.3
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.1e-68 264.6 268 59.7
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 1.2e-67 261.2 294 53.7
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 1.2e-64 251.1 258 58.9
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 1.6e-64 250.8 258 57.8
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 1.0e-63 248.1 280 55.7
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 3.9e-63 246.1 288 53.5
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 3.3e-62 243.0 286 51.4
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 3.3e-62 243.0 290 51.4
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 4.3e-62 242.7 291 51.9
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 4.3e-62 242.7 268 54.9
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 6.2e-61 238.8 259 55.6
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 8.1e-61 238.4 284 48.9
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 1.4e-60 237.7 264 52.7
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 1.4e-60 237.7 290 51.0
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 1.5e-59 234.2 291 49.5
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 2.0e-59 233.8 285 49.8
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.3e-58 231.1 285 50.5
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.2e-58 230.3 287 50.5
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 2.9e-58 229.9 283 49.5
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 3.7e-58 229.6 285 50.2
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 3.7e-58 229.6 291 48.8
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 4.9e-58 229.2 286 51.0
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 6.4e-58 228.8 269 50.2
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 4.1e-57 226.1 274 48.9
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 5.4e-57 225.7 267 49.1
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 5.4e-57 225.7 282 48.9
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 1.6e-56 224.2 279 47.7
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 2.7e-56 223.4 282 49.3
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 2.7e-56 223.4 296 45.3
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 6.0e-56 222.2 289 46.7
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 1.0e-55 221.5 298 48.3
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 2.3e-55 220.3 263 53.2
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 2.3e-55 220.3 289 47.8
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 5.1e-55 219.2 285 46.3
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 8.6e-55 218.4 336 42.0
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 1.1e-54 218.0 288 47.9
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 1.1e-54 218.0 285 46.0
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 3.3e-54 216.5 280 48.2
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 7.3e-54 215.3 313 44.1
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 1.2e-53 214.5 285 44.9
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 1.6e-53 214.2 287 47.7
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 2.1e-53 213.8 282 49.3
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 2.1e-53 213.8 266 49.2
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 2.8e-53 213.4 291 46.0
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 6.2e-53 212.2 280 47.9
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 8.1e-53 211.8 284 47.5
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 1.4e-52 211.1 285 44.2
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 1.8e-52 210.7 301 45.8
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 8.9e-52 208.4 351 41.9
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 4.4e-51 206.1 253 49.8
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 2.7e-48 196.8 260 46.2
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 3.5e-48 196.4 261 46.0
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 3.5e-48 196.4 260 46.2
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 4.6e-48 196.1 255 45.5
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 3.9e-47 193.0 247 47.8
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 6.6e-47 192.2 258 45.7
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 1.9e-46 190.7 245 47.8
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 7.3e-46 188.7 259 46.3
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 9.0e-44 181.8 237 47.7
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 1.5e-43 181.0 296 40.9
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 1.7e-42 177.6 263 41.8
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 1.1e-41 174.9 217 50.7
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 3.2e-41 173.3 202 52.0
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 1.6e-40 171.0 255 43.1
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 4.3e-38 162.9 299 38.8
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 5.6e-38 162.5 324 36.7
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 5.6e-38 162.5 147 61.9
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 1.3e-37 161.4 266 41.7
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 6.2e-37 159.1 143 60.8
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 6.4e-34 149.1 142 59.9
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 1.4e-33 147.9 249 39.0
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 3.2e-33 146.7 226 42.0
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 1.0e-31 141.7 242 41.7
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 1.1e-30 138.3 207 44.4
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 2.4e-28 130.6 332 30.7
TPR.G40805 Trifolium pratense HOM05D007071 ORTHO05D008677 9.0e-28 128.6 65 100.0
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 8.4e-26 122.1 140 49.3
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 2.4e-25 120.6 147 52.4
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 9.3e-25 118.6 291 34.7
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 1.6e-24 117.9 300 34.3
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 7.9e-24 115.5 208 40.9
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.9e-22 110.9 71 73.2
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 3.1e-20 103.6 154 47.4
Eucgr.A02531 Eucalyptus grandis HOM05D007071 ORTHO05D008677 3.8e-18 96.7 75 68.0
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 4.2e-17 93.2 69 65.2
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 4.6e-16 89.7 155 40.0
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 1.5e-14 84.7 80 57.5
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 1.9e-14 84.3 66 62.1
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 5.7e-14 82.8 214 33.6
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 9.7e-14 82.0 301 27.2
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 2.0e-11 74.3 289 27.3
CiPaw.16G104200 Carya illinoinensis HOM05D007071 ORTHO05D008677 5.0e-10 69.7 65 58.5
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 6.5e-10 69.3 41 82.9
CSS0001330 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 1.4e-09 68.2 60 56.7
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 3.2e-09 67.0 46 67.4
Os12g0623400 Oryza sativa ssp. japonica HOM05D007071 ORTHO05D008677 1.2e-08 65.1 119 38.7
Gohir.A07G056200 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.6e-08 64.7 116 38.8
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 6.1e-08 62.8 365 22.5
Mapoly0045s0075 Marchantia polymorpha HOM05D007071 ORTHO05D008677 7.4e-06 55.8 72 37.5
PGSC0003DMG400019076 Solanum tuberosum HOM05D007071 ORTHO05D008677 7.4e-06 55.8 70 41.4


User provided reference genes

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