Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 5.1e-174 614.4 326 100.0
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 8.8e-126 454.1 234 99.1
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 2.4e-123 446.0 234 97.0
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 3.5e-122 442.2 234 95.7
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 4.5e-122 441.8 234 96.2
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 6.5e-121 438.0 234 94.9
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 3.6e-119 432.2 234 93.6
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 1.5e-117 426.8 234 92.7
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 7.5e-117 424.5 234 91.5
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 1.3e-116 423.7 234 92.3
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 1.7e-116 423.3 234 90.6
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 1.7e-116 423.3 234 91.5
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 2.2e-116 422.9 234 91.9
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 2.8e-116 422.5 234 91.9
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 3.7e-116 422.2 234 91.0
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 4.9e-116 421.8 234 90.2
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 8.3e-116 421.0 234 90.2
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 1.1e-115 420.6 234 89.7
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 2.4e-115 419.5 240 90.4
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 2.4e-115 419.5 234 89.7
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 3.1e-115 419.1 234 90.6
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 4.1e-115 418.7 234 90.6
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 5.4e-115 418.3 234 91.0
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 7.0e-115 417.9 234 90.6
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 7.0e-115 417.9 234 90.6
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 7.0e-115 417.9 234 90.6
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 7.0e-115 417.9 234 91.0
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 7.0e-115 417.9 234 91.0
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 7.8e-114 414.5 234 89.3
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 7.8e-114 414.5 234 88.9
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 7.8e-114 414.5 235 90.2
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 1.0e-113 414.1 234 89.7
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 2.9e-113 412.5 234 88.9
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 3.8e-113 412.1 234 89.3
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 3.8e-113 412.1 234 89.7
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 5.0e-113 411.8 234 88.9
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 8.6e-113 411.0 234 88.9
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.5e-112 409.5 234 87.2
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 4.3e-112 408.7 234 87.2
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.3e-112 408.7 234 89.3
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 7.3e-112 407.9 234 89.7
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 9.5e-112 407.5 234 87.2
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 3.6e-111 405.6 234 87.2
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.7e-111 405.2 234 88.0
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 1.0e-110 404.1 234 87.6
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 5.2e-110 401.7 234 87.2
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 5.2e-110 401.7 234 85.9
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 6.8e-110 401.4 234 85.9
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 6.8e-110 401.4 234 85.9
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 8.9e-110 401.0 234 85.5
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.2e-109 400.6 234 86.3
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 1.2e-109 400.6 234 85.5
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.0e-109 399.8 234 85.9
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.0e-109 399.8 234 85.9
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.0e-109 399.8 234 85.9
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 2.0e-109 399.8 234 87.2
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 3.4e-109 399.1 234 84.6
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 3.4e-109 399.1 234 84.6
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 5.7e-109 398.3 234 84.2
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 1.3e-108 397.1 234 86.8
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 1.3e-108 397.1 235 85.1
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 1.7e-108 396.7 234 85.0
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 4.9e-108 395.2 234 85.5
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 6.4e-108 394.8 235 85.1
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 6.4e-108 394.8 234 83.8
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.4e-107 393.7 234 83.8
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 1.4e-107 393.7 234 85.0
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 1.4e-107 393.7 272 77.6
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 1.8e-107 393.3 234 85.0
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 1.8e-107 393.3 234 85.0
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 4.1e-107 392.1 234 84.6
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 5.4e-107 391.7 234 83.3
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 5.4e-107 391.7 234 82.9
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 5.4e-107 391.7 234 83.8
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 7.0e-107 391.3 233 83.7
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 7.0e-107 391.3 234 83.3
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 7.0e-107 391.3 234 83.3
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 1.6e-106 390.2 234 84.2
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 1.6e-106 390.2 234 84.6
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 1.6e-106 390.2 234 85.5
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 2.7e-106 389.4 234 83.3
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 3.5e-106 389.0 234 83.8
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 3.5e-106 389.0 234 83.8
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 3.5e-106 389.0 234 83.8
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 3.5e-106 389.0 234 83.8
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 4.6e-106 388.7 234 82.9
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 6.0e-106 388.3 234 82.1
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 7.8e-106 387.9 234 86.8
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 7.8e-106 387.9 234 84.2
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 1.3e-105 387.1 234 84.6
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 1.7e-105 386.7 234 81.6
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 2.3e-105 386.3 234 83.3
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 3.0e-105 386.0 235 83.0
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 8.6e-105 384.4 234 83.3
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 3.3e-104 382.5 261 75.1
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 7.3e-104 381.3 214 89.7
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 1.6e-103 380.2 246 79.7
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 3.6e-103 379.0 234 81.2
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.6e-103 379.0 234 82.5
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.8e-102 376.7 234 82.1
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 3.4e-101 372.5 238 80.7
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 6.4e-100 368.2 210 87.1
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 7.0e-99 364.8 234 84.2
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 6.0e-98 361.7 234 77.4
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 1.0e-97 360.9 235 80.4
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 2.5e-96 356.3 232 78.0
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 2.1e-95 353.2 234 74.8
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 3.6e-95 352.4 197 90.9
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 2.0e-93 346.7 234 76.9
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 1.6e-90 337.0 234 71.8
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 7.8e-90 334.7 197 86.3
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 2.1e-87 326.6 220 79.5
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 6.2e-87 325.1 233 74.2
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.8e-86 323.6 280 65.0
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.2e-85 320.9 220 77.7
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 2.9e-84 316.2 229 67.2
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 3.5e-82 309.3 188 81.4
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 4.6e-82 308.9 220 76.8
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 5.1e-81 305.4 167 90.4
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 2.8e-79 299.7 229 62.9
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 1.1e-78 297.7 235 68.9
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 1.2e-77 294.3 198 76.3
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 1.9e-75 287.0 229 64.2
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 8.7e-73 278.1 167 87.4
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 1.4e-59 234.2 178 69.7
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 2.3e-57 226.9 225 56.9
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 1.3e-55 221.1 232 48.7
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 1.3e-49 201.1 235 54.5
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 2.5e-48 196.8 131 75.6
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 9.7e-48 194.9 143 66.4
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 1.4e-46 191.0 233 53.2
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 3.1e-46 189.9 236 50.0
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 2.4e-38 163.7 186 52.7
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 6.9e-38 162.2 103 80.6
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 3.3e-32 143.3 80 88.8
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 9.7e-32 141.7 88 79.5
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 1.7e-31 141.0 74 94.6
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 5.2e-25 119.4 72 84.7
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 2.8e-23 113.6 67 83.6
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 4.5e-21 106.3 66 80.3
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 3.6e-18 96.7 67 67.2
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 6.7e-17 92.4 55 81.8
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 2.2e-15 87.4 114 41.2
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 3.8e-12 76.6 85 55.3
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 2.7e-10 70.5 38 81.6
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 4.7e-10 69.7 37 83.8
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 8.8e-09 65.5 37 75.7
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 7.5e-08 62.4 40 75.0
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 5.4e-06 56.2 43 60.5


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