Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 3.1e-276 954.5 481 100.0
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 6.2e-245 850.5 481 88.8
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 1.2e-219 766.5 477 79.9
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 5.9e-219 764.2 473 79.9
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 5.9e-219 764.2 473 80.3
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 1.5e-214 749.6 398 94.7
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 1.3e-213 746.5 476 77.3
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 1.3e-213 746.5 476 77.3
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 2.8e-213 745.3 477 77.1
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 4.1e-212 741.5 473 77.6
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 1.0e-207 726.9 473 76.1
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 6.8e-199 697.6 462 73.8
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 2.0e-198 696.0 475 72.8
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 2.9e-194 682.2 471 70.3
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 5.5e-193 677.9 476 71.2
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 4.7e-192 674.9 473 70.6
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 6.1e-192 674.5 470 70.0
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 1.4e-191 673.3 473 70.2
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 9.8e-190 667.2 468 70.3
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 3.7e-189 665.2 471 68.8
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 6.3e-189 664.5 470 70.0
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 2.7e-187 659.1 467 69.8
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 7.8e-187 657.5 462 70.8
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 2.9e-186 655.6 474 69.8
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 3.9e-186 655.2 473 67.4
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 3.9e-186 655.2 470 68.5
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 3.9e-186 655.2 470 68.9
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 5.0e-186 654.8 462 70.6
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 8.6e-186 654.1 462 69.9
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 1.5e-185 653.3 472 69.1
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 2.3e-183 646.0 461 69.8
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 5.2e-183 644.8 476 67.9
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 8.9e-183 644.0 518 63.9
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 5.8e-182 641.3 470 68.1
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 9.8e-182 640.6 544 61.6
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 1.9e-180 636.3 471 67.5
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 3.2e-180 635.6 462 69.5
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 7.8e-179 630.9 470 67.4
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 1.0e-178 630.6 463 69.3
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 9.5e-177 624.0 568 57.9
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 2.1e-176 622.9 471 64.5
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 3.6e-176 622.1 467 65.5
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 4.0e-175 618.6 474 62.7
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 2.0e-174 616.3 474 63.1
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 2.0e-174 616.3 468 65.6
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 2.6e-174 615.9 475 65.3
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 9.8e-174 614.0 471 66.0
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 1.3e-173 613.6 472 62.5
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 2.2e-173 612.8 465 67.5
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 1.4e-172 610.1 476 65.3
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 9.2e-172 607.4 471 63.7
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 7.8e-171 604.4 457 66.5
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 1.5e-169 600.1 467 60.8
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 4.3e-169 598.6 468 62.6
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 2.3e-167 592.8 484 60.5
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 4.0e-167 592.0 473 61.1
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 5.8e-166 588.2 466 61.6
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 1.7e-165 586.6 465 61.5
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 2.2e-165 586.3 474 60.3
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 4.9e-165 585.1 469 60.8
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 4.9e-165 585.1 470 60.2
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 4.9e-165 585.1 470 60.2
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 1.4e-164 583.6 439 65.1
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 2.4e-164 582.8 460 62.0
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 5.4e-164 581.6 469 60.6
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 5.4e-164 581.6 477 60.6
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 7.1e-164 581.3 468 60.0
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 1.2e-163 580.5 469 60.3
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 2.1e-163 579.7 462 62.1
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 2.1e-163 579.7 460 61.5
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 5.1e-162 575.1 472 62.1
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 8.6e-162 574.3 311 93.6
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 9.6e-161 570.9 468 58.1
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 9.6e-161 570.9 468 59.2
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 6.2e-160 568.2 467 58.7
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 8.1e-160 567.8 482 57.3
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 8.1e-160 567.8 446 65.7
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 1.1e-159 567.4 467 58.2
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 1.8e-159 566.6 468 59.0
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 2.4e-159 566.2 467 58.5
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 2.4e-159 566.2 467 58.5
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 2.9e-157 559.3 439 62.2
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 3.8e-157 558.9 441 61.5
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 6.4e-157 558.1 406 69.0
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 7.3e-153 544.7 473 56.9
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 3.1e-151 539.3 473 57.1
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 1.2e-147 527.3 457 61.3
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 3.5e-147 525.8 392 64.0
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 7.8e-147 524.6 484 57.6
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 2.3e-146 523.1 375 68.0
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 1.6e-144 516.9 402 64.4
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 2.6e-134 483.0 466 54.1
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 3.9e-130 469.2 485 54.2
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 5.7e-129 465.3 407 58.0
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 8.2e-120 434.9 335 64.8
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 5.5e-116 422.2 310 66.1
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 2.1e-115 420.2 324 63.0
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 4.1e-111 406.0 414 50.7
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 1.5e-102 377.5 319 58.3
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 1.7e-93 347.4 256 66.4
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 1.7e-93 347.4 256 66.4
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 2.9e-85 320.1 467 41.1
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 9.2e-71 271.9 395 39.2
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 5.2e-66 256.1 215 60.9
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 6.8e-66 255.8 183 69.9
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 4.4e-65 253.1 205 63.4
CANSAT25G1465 Cannabis sativa HOM05D007119 ORTHO05D009220 4.4e-41 173.3 114 71.1
HanXRQChr08g0208031 Helianthus annuus HOM05D007119 ORTHO05D009220 1.4e-26 125.2 93 61.3
Nitab4.5_0002688g0050 Nicotiana tabacum HOM05D007119 ORTHO05D036862 4.9e-16 90.1 64 60.9
Nitab4.5_0000041g0230 Nicotiana tabacum HOM05D007119 ORTHO05D036862 1.4e-15 88.6 64 60.9
Peaxi162Scf00128g00647 Petunia axillaris HOM05D007119 ORTHO05D036862 3.9e-13 80.5 77 49.4
Glyma.16G096400 Glycine max HOM05D001723 ORTHO05D001706 2.6e-09 67.8 38 86.8


User provided reference genes

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