Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14142 Trifolium pratense HOM05D008692 ORTHO05D015071 2.1e-230 802.4 509 100.0
Medtr5g094960 Medicago truncatula HOM05D008692 ORTHO05D015071 8.8e-64 248.8 533 43.3
TPR.G25325 Trifolium pratense HOM05D008692 ORTHO05D015071 1.0e-59 235.3 176 82.4
Medtr5g094990 Medicago truncatula HOM05D008692 ORTHO05D015071 5.5e-58 229.6 538 41.4
Medtr5g094850 Medicago truncatula HOM05D008692 ORTHO05D015071 2.8e-54 217.2 556 37.2
Medtr5g094950 Medicago truncatula HOM05D008692 ORTHO05D015071 7.0e-53 212.6 560 42.7
TPR.G14169 Trifolium pratense HOM05D008692 ORTHO05D015071 8.3e-46 189.1 605 41.7
Ca_06382_v3 Cicer arietinum L. HOM05D008692 ORTHO05D011196 5.4e-45 186.4 395 38.5
Ca_29963_v3 Cicer arietinum L. HOM05D008692 ORTHO05D015071 5.4e-45 186.4 395 38.5
Medtr5g094920 Medicago truncatula HOM05D008692 ORTHO05D015071 6.1e-41 172.9 569 40.8
Psat2g009200 Pisum sativum HOM05D008692 ORTHO05D015071 8.0e-41 172.6 552 35.0
LjContig00081g0012246 Lotus japonicus HOM05D008692 ORTHO05D011196 8.6e-27 125.9 525 31.6
Medtr5g094910 Medicago truncatula HOM05D008692 ORTHO05D015071 8.9e-24 115.9 509 40.5
Medtr5g095390 Medicago truncatula HOM05D008692 ORTHO05D015071 1.3e-19 102.1 485 29.3
TPR.G25324 Trifolium pratense HOM05D000445 ORTHO05D015071 1.7e-19 101.7 84 89.3
VMungo0647G0384 Vigna mungo HOM05D008692 ORTHO05D011196 4.0e-16 90.5 510 26.7
VMungo0647G1494 Vigna mungo HOM05D008692 ORTHO05D011196 1.5e-15 88.6 527 26.9
Psat2g008360 Pisum sativum HOM05D008692 ORTHO05D011196 1.3e-14 85.5 163 38.7
VMungo0647G0491 Vigna mungo HOM05D009155 ORTHO05D004853 2.2e-14 84.7 526 25.5
TPR.G8598 Trifolium pratense HOM05D005718 ORTHO05D004853 1.9e-13 81.6 167 38.3
Glyma.14G015200 Glycine max HOM05D008692 ORTHO05D011196 7.1e-13 79.7 496 26.0
TPR.G14149 Trifolium pratense HOM05D008692 ORTHO05D011196 2.7e-12 77.8 476 37.2
TPR.G8609 Trifolium pratense HOM05D005718 ORTHO05D004853 3.5e-12 77.4 161 38.5
VMungo0647G1248 Vigna mungo HOM05D008692 ORTHO05D011196 6.0e-12 76.6 324 26.9
VMungo0647G2344 Vigna mungo HOM05D000176 ORTHO05D000106 6.0e-12 76.6 150 37.3
TPR.G8591 Trifolium pratense HOM05D005718 ORTHO05D004853 1.3e-11 75.5 150 40.0
VMungo0647G1912 Vigna mungo HOM05D008692 ORTHO05D011196 6.6e-11 73.2 149 37.6
Medtr5g095370 Medicago truncatula HOM05D008692 ORTHO05D011196 8.6e-11 72.8 168 35.1
Lalb_Chr17g0348841 Lupinus albus HOM05D008692 ORTHO05D011196 1.1e-10 72.4 174 35.6
Psat2g008400 Pisum sativum HOM05D008692 ORTHO05D011196 1.1e-10 72.4 158 34.8
Medtr5g095400 Medicago truncatula HOM05D005718 ORTHO05D004853 1.9e-10 71.6 156 41.0
Phvul.008G167500 Phaseolus vulgaris HOM05D008692 ORTHO05D011196 3.3e-10 70.9 177 33.9
Medtr5g095430 Medicago truncatula HOM05D005718 ORTHO05D004853 4.3e-10 70.5 150 40.0
Medtr5g094970 Medicago truncatula HOM05D008692 ORTHO05D011196 9.6e-10 69.3 279 46.2
Phvul.008G277142 Phaseolus vulgaris HOM05D008692 ORTHO05D011196 9.6e-10 69.3 142 36.6
Medtr5g095310 Medicago truncatula HOM05D005718 ORTHO05D004853 1.2e-09 68.9 134 38.8
Medtr5g095050 Medicago truncatula HOM05D008692 ORTHO05D011196 2.8e-09 67.8 136 35.3
Ca_06381_v3 Cicer arietinum L. HOM05D008692 ORTHO05D034585 1.8e-08 65.1 115 45.2
Psat7g256720 Pisum sativum HOM05D008692 ORTHO05D011196 8.9e-08 62.8 73 49.3
arahy.Tifrunner.gnm1.ann1.JWE1IW Arachis hypogaea HOM05D017804 ORTHO05D011196 2.0e-07 61.6 150 36.0
Lj1g0006584 Lotus japonicus HOM05D008692 ORTHO05D011196 2.6e-07 61.2 168 35.7
TPR.G14147 Trifolium pratense HOM05D008692 ORTHO05D011196 1.3e-06 58.9 124 34.7
Medtr5g077500 Medicago truncatula HOM05D008692 ORTHO05D262651 2.9e-06 57.8 121 39.7


User provided reference genes

Program Settings