Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14113 Trifolium pratense HOM05D007752 ORTHO05D009994 3.4e-161 572.4 505 100.0
Medtr7g073260 Medicago truncatula HOM05D007752 ORTHO05D009994 7.6e-100 368.6 509 75.8
Lj1g0026088 Lotus japonicus HOM05D007752 ORTHO05D009994 7.9e-73 278.9 505 70.1
Psat3g118880 Pisum sativum HOM05D007752 ORTHO05D009994 6.5e-59 232.6 179 72.6
Ca_07763_v3 Cicer arietinum L. HOM05D007752 ORTHO05D009994 4.1e-45 186.8 389 65.0
Glyma.09G274800 Glycine max HOM05D007752 ORTHO05D009994 3.0e-40 170.6 436 61.0
Phvul.008G082800 Phaseolus vulgaris HOM05D007752 ORTHO05D009994 1.7e-35 154.8 507 63.7
VMungo1383G3403 Vigna mungo HOM05D007752 ORTHO05D009994 2.9e-35 154.1 509 57.8
VMungo0251G1651 Vigna mungo HOM05D007752 ORTHO05D009994 2.0e-31 141.4 377 28.9
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 1.8e-29 134.8 474 56.8
Lj3P941T40 Lonicera japonica HOM05D007752 ORTHO05D009994 2.4e-21 107.8 163 35.6
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 2.4e-21 107.8 410 59.8
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 5.4e-21 106.7 474 54.4
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 5.4e-21 106.7 410 59.8
Sc20g0006950 Simmondsia chinensis HOM05D007752 ORTHO05D009994 5.0e-19 100.1 168 33.3
QL07p032115 Quercus lobata HOM05D007752 ORTHO05D009994 8.6e-19 99.4 514 52.5
Eucgr.A00738 Eucalyptus grandis HOM05D007752 ORTHO05D009994 2.5e-18 97.8 163 35.0
VMungo0720G0765 Vigna mungo HOM05D007752 ORTHO05D009994 4.2e-18 97.1 388 25.0
FAN02G1651 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.6e-17 95.1 109 43.1
Prupe.6G293600 Prunus persica HOM05D007752 ORTHO05D009994 2.1e-17 94.7 130 39.2
RcHm_v2.0_Chr3g0460471 Rosa chinensis HOM05D007752 ORTHO05D009994 4.7e-17 93.6 130 40.0
FvH4_6g09870 Fragaria vesca HOM05D007752 ORTHO05D009994 1.0e-16 92.4 109 41.3
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.0e-16 92.4 111 41.4
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 3.0e-16 90.9 109 40.4
CiPaw.10G164800 Carya illinoinensis HOM05D007752 ORTHO05D009994 1.5e-15 88.6 447 44.3
Ciclev10013314m.g Citrus clementina HOM05D007752 ORTHO05D009994 1.5e-15 88.6 135 34.1
Hma1.2p1_0174F.1_g076820 Hydrangea macrophylla HOM05D007752 ORTHO05D009994 9.8e-15 85.9 112 41.1
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 1.7e-14 85.1 381 61.9
Haze_21175 Corylus avellana HOM05D007752 ORTHO05D009994 4.9e-14 83.6 150 38.0
Potri.016G136700 Populus trichocarpa HOM05D007752 ORTHO05D009994 8.3e-14 82.8 118 37.3
MD04G1174700 Malus domestica HOM05D007752 ORTHO05D009994 1.4e-13 82.0 110 42.7
TAR633G0335 Trochodendron aralioides HOM05D007752 ORTHO05D009994 3.1e-13 80.9 135 30.4
SGA_v2.0_scaffold85G26614 Striga asiatica HOM05D007752 ORTHO05D009994 4.1e-13 80.5 90 45.6
Sed0005875 Sechium edule HOM05D007752 ORTHO05D009994 7.0e-13 79.7 152 33.6
ClCG10G022730 Citrullus lanatus HOM05D007752 ORTHO05D009994 1.2e-12 79.0 167 29.9
CANSAT35G0798 Cannabis sativa HOM05D007752 ORTHO05D009994 5.9e-12 76.6 111 40.5
TWI77G0759 Tripterygium wilfordii HOM05D007752 ORTHO05D009994 5.9e-12 76.6 153 32.0
Cfa017034 Carpinus fangiana HOM05D007752 ORTHO05D009994 7.8e-12 76.3 97 43.3
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 7.8e-12 76.3 118 33.9
PGR031G1793 Punica granatum HOM05D007752 ORTHO05D009994 1.0e-11 75.9 152 31.6
Zm00001eb016080 Zea mays HOM05D007752 ORTHO05D009994 1.0e-11 75.9 173 29.5
MELO3C009103.2 Cucumis melo HOM05D007752 ORTHO05D009994 1.7e-11 75.1 156 28.8
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 1.7e-11 75.1 67 56.7
Duzib151G0981 Durio zibethinus HOM05D007752 ORTHO05D009994 2.9e-11 74.3 143 34.3
THA.LOC104807022 Tarenaya hassleriana HOM05D007752 ORTHO05D009994 5.0e-11 73.6 157 29.3
Dinv16979 Davidia involucrata HOM05D007752 ORTHO05D009994 8.6e-11 72.8 94 41.5
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 8.6e-11 72.8 106 39.6
SalBow8G2716 Salvia bowleyana HOM05D007752 ORTHO05D009994 8.6e-11 72.8 157 29.3
Gohir.A02G003300 Gossypium hirsutum HOM05D007752 ORTHO05D009994 1.9e-10 71.6 104 38.5
Migut.J00038 Erythranthe guttata HOM05D007752 ORTHO05D009994 2.5e-10 71.2 134 35.8
Rhsim04G0121800 Rhododendron simsii HOM05D007752 ORTHO05D009994 2.5e-10 71.2 175 35.4
HanXRQChr01g0000111 Helianthus annuus HOM05D007752 ORTHO05D009994 9.5e-10 69.3 134 30.6
Thecc.04G151600 Theobroma cacao HOM05D007752 ORTHO05D009994 1.6e-09 68.6 156 32.1
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 3.6e-09 67.4 96 39.6
Ah.08g209310 Amaranthus hybridus HOM05D007752 ORTHO05D009994 4.7e-09 67.0 101 33.7
Aqoxy4G02425 Aquilegia oxysepala HOM05D007752 ORTHO05D009994 8.0e-09 66.2 96 39.6
Cpa.g.sc86.57 Carica papaya HOM05D007752 ORTHO05D009994 1.8e-08 65.1 167 25.1
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 3.0e-08 64.3 145 31.0
Gorai.005G004200 Gossypium raimondii HOM05D007752 ORTHO05D009994 6.8e-08 63.2 149 27.5
Lsat_1_v5_gn_5_152320 Lactuca sativa HOM05D007752 ORTHO05D009994 8.9e-08 62.8 134 28.4
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 1.2e-07 62.4 95 34.7
ECA248G3142 Erigeron canadensis HOM05D007752 ORTHO05D009994 1.2e-07 62.4 90 34.4
Nn2g10299 Nelumbo nucifera HOM05D007752 ORTHO05D009994 1.5e-07 62.0 104 35.6
Nitab4.5_0004433g0030 Nicotiana tabacum HOM05D007752 ORTHO05D009994 2.6e-07 61.2 159 31.4
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 5.7e-07 60.1 156 35.3
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 7.5e-07 59.7 123 31.7
Manes.08G171200 Manihot esculenta HOM05D007752 ORTHO05D009994 7.5e-07 59.7 51 51.0
Gohir.D02G003700 Gossypium hirsutum HOM05D007752 ORTHO05D009994 2.9e-06 57.8 90 37.8
CDE06G1380 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 3.7e-06 57.4 77 39.0
SalBow1G4712 Salvia bowleyana HOM05D007752 ORTHO05D009994 3.7e-06 57.4 155 31.6
SalBow1G2062 Salvia bowleyana HOM05D007752 ORTHO05D009994 4.9e-06 57.0 154 31.8


User provided reference genes

Program Settings