Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 4.9e-196 687.6 339 100.0
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 3.4e-189 664.8 338 96.4
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 7.9e-186 653.7 341 95.0
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 5.3e-182 641.0 330 95.8
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 5.1e-169 597.8 337 86.4
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 2.0e-165 585.9 334 87.1
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 5.2e-161 571.2 337 83.1
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 5.9e-157 557.8 351 80.3
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 8.5e-156 553.9 351 79.8
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 5.5e-155 551.2 325 81.2
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 2.1e-154 549.3 330 80.3
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 2.7e-154 548.9 336 78.3
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 3.0e-153 545.4 338 78.7
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 4.0e-153 545.0 324 82.1
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 6.7e-153 544.3 328 80.5
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 8.8e-153 543.9 338 78.4
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 1.2e-152 543.5 328 80.5
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 1.5e-152 543.1 324 81.5
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 2.0e-152 542.7 331 80.4
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 2.0e-152 542.7 338 78.1
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 3.3e-152 542.0 338 78.1
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 7.5e-152 540.8 328 80.5
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.2e-151 539.3 328 79.3
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 2.8e-151 538.9 329 80.5
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 4.8e-151 538.1 331 78.2
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 6.3e-151 537.7 334 79.6
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 8.2e-151 537.3 338 78.7
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 1.1e-150 537.0 325 79.4
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 7.0e-150 534.3 337 79.2
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 9.1e-150 533.9 328 79.3
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 1.6e-149 533.1 327 80.4
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 5.9e-149 531.2 344 75.9
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 1.0e-148 530.4 324 80.2
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 2.2e-148 529.3 344 75.9
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 8.5e-148 527.3 328 79.6
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 8.5e-148 527.3 328 78.0
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.1e-147 526.9 330 78.2
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 1.6e-146 523.1 331 77.3
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 2.7e-146 522.3 338 75.7
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 3.6e-146 521.9 332 77.4
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 3.6e-146 521.9 324 78.1
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 6.1e-146 521.2 335 75.5
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 3.0e-145 518.8 302 80.5
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 3.0e-145 518.8 328 77.1
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 3.0e-145 518.8 370 71.1
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 6.8e-145 517.7 311 79.4
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 2.0e-144 516.2 319 78.7
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.6e-144 515.8 369 71.0
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 4.4e-144 515.0 335 75.2
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.2e-143 512.7 336 75.6
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 2.2e-143 512.7 328 76.5
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 1.4e-142 510.0 307 80.5
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.4e-142 510.0 336 75.3
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 5.4e-142 508.1 333 75.7
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 1.6e-141 506.5 333 75.7
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 5.9e-141 504.6 336 74.4
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.0e-140 503.8 336 74.1
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 1.0e-140 503.8 339 73.7
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 3.8e-140 501.9 317 75.7
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 3.8e-140 501.9 327 74.6
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 3.8e-140 501.9 317 75.4
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 3.8e-140 501.9 338 73.1
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 3.8e-140 501.9 329 76.6
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 5.0e-140 501.5 319 76.8
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 5.0e-140 501.5 328 74.7
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 1.2e-138 496.9 340 72.6
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 1.6e-138 496.5 317 75.1
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 2.1e-138 496.1 328 73.2
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 3.6e-138 495.4 317 75.1
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 8.9e-137 490.7 359 69.4
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 2.6e-136 489.2 318 74.5
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 1.7e-135 486.5 317 74.1
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 3.5e-133 478.8 328 73.2
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 4.5e-133 478.4 307 75.9
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 8.6e-132 474.2 296 77.4
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 1.1e-131 473.8 310 73.9
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 1.8e-129 466.5 283 81.6
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.0e-129 465.7 331 70.1
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 3.0e-129 465.7 363 66.4
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 6.8e-129 464.5 302 74.8
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 6.8e-129 464.5 289 78.5
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.5e-128 463.4 362 65.7
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 5.8e-128 461.5 307 75.9
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 3.7e-127 458.8 339 68.1
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 3.7e-127 458.8 339 68.1
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 6.4e-127 458.0 331 71.3
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 9.2e-126 454.1 279 78.5
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 1.2e-125 453.8 328 69.8
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.6e-125 453.4 267 79.8
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 3.5e-125 452.2 340 68.2
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 5.6e-123 444.9 320 68.1
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.6e-122 443.4 381 62.2
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 1.6e-122 443.4 299 72.2
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 5.2e-121 438.3 282 76.2
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 2.6e-120 436.0 335 66.3
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 9.2e-118 427.6 290 73.1
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.7e-116 423.3 383 60.6
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 5.0e-116 421.8 328 67.1
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 2.1e-114 416.4 307 66.1
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 5.2e-113 411.8 265 76.6
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 1.2e-112 410.6 292 68.5
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 3.7e-111 405.6 319 59.9
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 9.2e-110 401.0 339 61.9
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 1.6e-109 400.2 326 60.1
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 7.3e-107 391.3 236 80.5
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 8.1e-106 387.9 318 59.4
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 1.4e-105 387.1 291 68.0
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 4.2e-102 375.6 318 58.2
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 2.1e-98 363.2 277 67.9
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 1.2e-96 357.5 290 65.9
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 3.5e-93 345.9 232 70.7
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 3.0e-92 342.8 310 53.9
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 3.6e-90 335.9 244 68.4
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 7.1e-86 321.6 230 65.2
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 1.3e-82 310.8 220 69.5
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 2.5e-78 296.6 225 67.1
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 5.8e-72 275.4 372 42.2
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 4.1e-65 252.7 169 79.3
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.4e-52 211.1 183 61.2
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.0e-51 207.2 142 71.8
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 2.8e-50 203.4 324 38.0
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 3.0e-44 183.3 129 68.2
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 1.8e-41 174.1 127 63.8
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 8.5e-39 165.2 282 37.2
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.2e-31 140.6 97 68.0
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 2.0e-19 100.9 82 59.8
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 1.8e-17 94.4 71 64.8
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 5.4e-17 92.8 45 91.1
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 5.2e-12 76.3 120 45.8


User provided reference genes

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