Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14096 Trifolium pratense HOM05D007972 ORTHO05D010352 1.8e-105 386.0 199 100.0
Medtr7g081655 Medicago truncatula HOM05D007972 ORTHO05D010352 2.6e-88 328.9 199 85.4
Psat3g099040 Pisum sativum HOM05D007972 ORTHO05D010352 8.4e-79 297.4 201 80.6
Lj5g0008867 Lotus japonicus HOM05D007972 ORTHO05D010352 3.0e-68 262.3 200 70.0
Glyma.09G244600 Glycine max HOM05D007972 ORTHO05D010352 1.5e-64 250.0 197 69.0
VMungo1383G2794 Vigna mungo HOM05D007972 ORTHO05D010352 2.9e-63 245.7 191 68.6
Lalb_Chr01g0021721 Lupinus albus HOM05D007972 ORTHO05D010352 6.9e-57 224.6 199 64.8
Glyma.18G249100 Glycine max HOM05D007972 ORTHO05D010352 4.4e-51 205.3 201 60.7
Medtr7g092700 Medicago truncatula HOM05D007972 ORTHO05D010352 1.4e-49 200.3 187 61.0
Ca_08498_v3 Cicer arietinum L. HOM05D007972 ORTHO05D010352 9.1e-49 197.6 190 60.5
Ca_29723_v3 Cicer arietinum L. HOM05D007972 ORTHO05D010352 9.1e-49 197.6 190 60.5
Psat3g070000 Pisum sativum HOM05D007972 ORTHO05D010352 6.5e-47 191.4 201 58.2
Glyma.09G244400 Glycine max HOM05D007972 ORTHO05D010352 4.2e-46 188.7 191 59.2
TPR.G4718 Trifolium pratense HOM05D007972 ORTHO05D010352 2.1e-45 186.4 196 53.6
TPR.G28769 Trifolium pratense HOM05D007972 ORTHO05D010352 1.2e-43 180.6 197 53.3
Medtr7g092710 Medicago truncatula HOM05D007972 ORTHO05D010352 1.5e-43 180.3 185 56.2
Lj1g0012968 Lotus japonicus HOM05D007972 ORTHO05D010352 1.3e-42 177.2 173 60.1
Glyma.18G248700 Glycine max HOM05D007972 ORTHO05D010352 1.7e-42 176.8 202 53.0
VMungo1383G2083 Vigna mungo HOM05D007972 ORTHO05D010352 3.7e-42 175.6 188 57.4
Phvul.008G048700 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 8.2e-42 174.5 202 52.0
QL04p029068 Quercus lobata HOM05D007972 ORTHO05D010352 8.8e-36 154.5 185 52.4
CiPaw.13G024900 Carya illinoinensis HOM05D007972 ORTHO05D010352 1.3e-34 150.6 185 51.4
Sabra17G0016900 Salix brachista HOM05D007972 ORTHO05D010352 3.5e-32 142.5 168 53.0
CANSAT25G1078 Cannabis sativa HOM05D007972 ORTHO05D010352 5.9e-32 141.7 175 49.7
Sabra17G0017000 Salix brachista HOM05D007972 ORTHO05D010352 5.9e-32 141.7 167 52.1
Potri.017G027900 Populus trichocarpa HOM05D007972 ORTHO05D010352 1.0e-31 141.0 189 50.3
Manes.11G122500 Manihot esculenta HOM05D007972 ORTHO05D010352 1.1e-30 137.5 191 46.6
Manes.04G044100 Manihot esculenta HOM05D007972 ORTHO05D010352 4.2e-30 135.6 137 56.9
Prupe.2G122000 Prunus persica HOM05D007972 ORTHO05D010352 7.2e-30 134.8 185 48.1
Cfa011053 Carpinus fangiana HOM05D007972 ORTHO05D010352 9.5e-30 134.4 187 48.7
TWI14G1321 Tripterygium wilfordii HOM05D007972 ORTHO05D010352 3.6e-29 132.5 162 51.2
MD07G1098000 Malus domestica HOM05D007972 ORTHO05D010352 5.2e-28 128.6 174 46.6
Oeu037442.1 Olea europaea HOM05D007972 ORTHO05D010352 7.5e-27 124.8 161 49.1
RcHm_v2.0_Chr1g0346011 Rosa chinensis HOM05D007972 ORTHO05D010352 1.3e-26 124.0 197 42.6
TAR636G0859 Trochodendron aralioides HOM05D007972 ORTHO05D010352 2.2e-26 123.2 185 46.5
TWI59G1165 Tripterygium wilfordii HOM05D007972 ORTHO05D010352 8.3e-26 121.3 162 48.1
RcHm_v2.0_Chr1g0346041 Rosa chinensis HOM05D007972 ORTHO05D010352 5.4e-25 118.6 193 43.5
MD02G1218900 Malus domestica HOM05D007972 ORTHO05D010352 1.7e-23 113.6 173 43.4
AUR62041847 Chenopodium quinoa HOM05D007972 ORTHO05D010352 2.5e-22 109.8 176 41.5
Nn1g00786 Nelumbo nucifera HOM05D007972 ORTHO05D010352 2.5e-22 109.8 187 42.2
MBI04_g13845_MAGBIO Magnolia biondii HOM05D007972 ORTHO05D010352 4.3e-22 109.0 186 41.4
Nitab4.5_0004837g0020 Nicotiana tabacum HOM05D007972 ORTHO05D010352 9.5e-22 107.8 168 45.8
Peaxi162Scf00853g00034 Petunia axillaris HOM05D007972 ORTHO05D010352 4.7e-21 105.5 172 43.6
Migut.B01509 Erythranthe guttata HOM05D007972 ORTHO05D010352 1.4e-20 104.0 159 45.3
AUR62032352 Chenopodium quinoa HOM05D007972 ORTHO05D010352 1.2e-19 100.9 175 38.9
Eucgr.E01544 Eucalyptus grandis HOM05D007972 ORTHO05D010352 2.0e-19 100.1 186 37.1
Phvul.008G048532 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 2.6e-19 99.8 101 58.4
Nitab4.5_0000563g0210 Nicotiana tabacum HOM05D007972 ORTHO05D010352 4.4e-19 99.0 168 44.0
Eucgr.E01542 Eucalyptus grandis HOM05D007972 ORTHO05D010352 1.7e-18 97.1 186 37.1
Sopen01g035720 Solanum pennellii HOM05D007972 ORTHO05D010352 7.0e-17 91.7 183 42.1
Solyc01g089880.3 Solanum lycopersicum HOM05D007972 ORTHO05D010352 9.2e-17 91.3 186 40.3
PGSC0003DMG400031171 Solanum tuberosum HOM05D007972 ORTHO05D010352 2.0e-16 90.1 169 43.2
Solyc01g089890.3 Solanum lycopersicum HOM05D007972 ORTHO05D010352 3.5e-16 89.4 169 40.8
CAN.G1585.6 Capsicum annuum HOM05D007972 ORTHO05D010352 4.6e-16 89.0 186 38.7
CAN.G1585.7 Capsicum annuum HOM05D007972 ORTHO05D010352 7.8e-16 88.2 188 40.4
PGSC0003DMG401031172 Solanum tuberosum HOM05D007972 ORTHO05D010352 9.5e-14 81.3 169 39.6
Eucgr.E01539 Eucalyptus grandis HOM05D007972 ORTHO05D010352 3.6e-13 79.3 190 33.7
QL04p029065 Quercus lobata HOM05D007972 ORTHO05D010352 3.6e-13 79.3 135 44.4
arahy.Tifrunner.gnm1.ann1.F86J4F Arachis hypogaea HOM05D005905 ORTHO05D005996 4.7e-13 79.0 83 51.8
Sopen01g035730 Solanum pennellii HOM05D007972 ORTHO05D010352 8.0e-13 78.2 121 44.6
Phvul.008G048466 Phaseolus vulgaris HOM05D007972 ORTHO05D010352 2.9e-10 69.7 67 53.7
EL10Ac2g02566 Beta vulgaris HOM05D007972 ORTHO05D010352 5.0e-07 58.9 62 51.6
Eucgr.E01540 Eucalyptus grandis HOM05D007972 ORTHO05D010352 4.3e-06 55.8 111 35.1


User provided reference genes

Program Settings