Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 2.3e-173 612.1 297 100.0
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 1.0e-165 586.6 297 95.3
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 5.0e-160 567.8 297 90.9
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 6.5e-160 567.4 297 91.9
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 1.6e-158 562.8 297 91.9
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 1.0e-157 560.1 297 91.2
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 2.0e-156 555.8 297 90.6
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 5.3e-154 547.7 297 89.6
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 2.0e-153 545.8 294 88.8
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 2.0e-148 529.3 295 85.8
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 2.0e-148 529.3 295 85.8
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 9.8e-148 526.9 288 85.8
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 1.3e-147 526.6 288 85.4
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 2.2e-147 525.8 288 86.1
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 4.8e-147 524.6 286 86.0
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 5.4e-146 521.2 288 85.1
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 5.4e-146 521.2 287 85.7
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 1.2e-145 520.0 287 85.4
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.2e-145 520.0 287 85.4
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 2.7e-145 518.8 288 84.0
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 2.7e-145 518.8 288 83.7
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 3.5e-145 518.5 290 82.8
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 4.5e-145 518.1 287 84.3
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 5.9e-145 517.7 288 83.7
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 7.7e-145 517.3 285 84.9
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.0e-144 516.9 287 84.7
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 2.3e-144 515.8 288 84.0
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 2.9e-144 515.4 288 84.0
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 2.9e-144 515.4 288 83.0
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 3.8e-144 515.0 288 84.4
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 8.6e-144 513.8 286 83.2
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 8.6e-144 513.8 288 84.0
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 1.5e-143 513.1 288 83.3
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.9e-143 512.7 288 82.6
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 1.9e-143 512.7 288 82.6
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 3.3e-143 511.9 288 84.0
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 3.3e-143 511.9 288 83.0
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 4.2e-143 511.5 288 84.0
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 7.2e-143 510.8 287 82.6
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 9.5e-143 510.4 288 81.6
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 1.2e-142 510.0 288 82.3
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 1.6e-142 509.6 290 81.7
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 2.8e-142 508.8 288 82.3
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 3.6e-142 508.4 288 82.6
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 4.7e-142 508.1 288 82.3
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 8.0e-142 507.3 288 83.3
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 8.0e-142 507.3 287 82.2
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 1.4e-141 506.5 288 81.2
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.4e-141 506.5 287 84.3
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 1.8e-141 506.1 287 83.3
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.8e-141 506.1 288 82.3
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.8e-141 506.1 288 83.0
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 2.3e-141 505.8 287 81.5
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 2.3e-141 505.8 287 81.5
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 4.0e-141 505.0 287 81.5
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 5.2e-141 504.6 285 83.9
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 5.2e-141 504.6 291 83.2
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 5.2e-141 504.6 288 81.6
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 6.8e-141 504.2 288 81.9
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 1.2e-140 503.4 284 83.5
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 1.2e-140 503.4 288 83.0
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 1.2e-140 503.4 289 82.7
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 3.4e-140 501.9 287 80.5
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 3.4e-140 501.9 287 80.8
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 7.5e-140 500.7 287 80.5
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 7.5e-140 500.7 287 81.5
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 9.8e-140 500.4 290 81.4
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 9.8e-140 500.4 318 75.5
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 9.8e-140 500.4 287 80.5
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 1.3e-139 500.0 287 80.5
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 1.3e-139 500.0 288 81.6
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 1.7e-139 499.6 278 83.5
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 2.8e-139 498.8 287 81.2
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 2.8e-139 498.8 288 81.6
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 6.3e-139 497.7 289 79.9
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 8.3e-139 497.3 288 80.9
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 1.2e-137 493.4 287 79.8
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.0e-137 492.7 284 82.4
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 2.0e-137 492.7 288 78.8
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 2.7e-137 492.3 287 79.4
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 3.5e-137 491.9 286 80.1
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 5.9e-137 491.1 287 79.4
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 5.9e-137 491.1 288 79.2
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 1.3e-136 490.0 288 79.2
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.7e-136 489.6 288 80.2
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 1.5e-135 486.5 287 78.0
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 1.5e-135 486.5 287 78.0
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 2.5e-135 485.7 285 78.9
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 4.3e-135 485.0 286 78.0
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 4.3e-135 485.0 286 78.0
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 7.3e-135 484.2 285 78.2
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 9.5e-135 483.8 276 82.6
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 1.2e-134 483.4 272 84.2
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 1.4e-133 479.9 290 77.2
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 1.8e-133 479.6 271 83.0
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 2.3e-133 479.2 288 76.7
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 4.4e-132 474.9 272 82.4
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 1.3e-131 473.4 287 74.9
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 8.3e-131 470.7 288 75.7
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 2.7e-129 465.7 291 75.6
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 3.9e-128 461.8 278 78.4
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 3.9e-128 461.8 289 74.7
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 5.0e-128 461.5 285 77.2
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 8.6e-128 460.7 249 85.1
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 1.5e-127 459.9 290 73.1
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 2.5e-127 459.1 288 76.4
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.1e-125 453.8 288 76.0
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 1.8e-125 453.0 311 72.3
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 1.5e-124 449.9 308 70.8
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 6.0e-121 438.0 283 70.7
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 1.1e-119 433.7 281 70.8
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 1.2e-118 430.3 288 72.2
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 2.6e-116 422.5 281 68.3
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 2.4e-114 416.0 271 72.7
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.3e-112 410.2 267 70.8
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 5.1e-112 408.3 270 69.3
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 2.6e-108 396.0 281 64.8
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 8.1e-102 374.4 218 79.4
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 7.6e-92 341.3 307 59.0
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.3e-86 323.9 183 83.6
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 2.1e-86 323.2 188 79.8
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 5.8e-84 315.1 283 51.2
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 1.4e-82 310.5 184 79.9
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 3.9e-80 302.4 294 52.0
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 8.7e-80 301.2 171 81.9
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 4.8e-78 295.4 290 52.1
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 5.8e-76 288.5 188 69.7
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 1.4e-74 283.9 299 48.8
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 1.1e-63 247.7 164 76.2
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 9.4e-58 228.0 312 43.9
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.4e-53 213.4 222 52.7
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 7.7e-52 208.4 219 52.5
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 6.3e-46 188.7 104 82.7
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.2e-42 176.0 99 82.8
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 7.2e-42 175.3 100 81.0
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.4e-39 166.4 94 81.9
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 1.7e-27 127.5 76 80.3
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 8.9e-24 115.2 164 41.5
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.5e-20 103.2 94 58.5
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 1.5e-07 61.2 51 52.9
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 1.3e-06 58.2 40 72.5


User provided reference genes

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