Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13887 Trifolium pratense HOM05D008517 ORTHO05D010482 1.1e-136 490.0 247 100.0
Medtr3g062470 Medicago truncatula HOM05D008517 ORTHO05D010482 2.3e-102 375.9 251 72.9
Psat5g147520 Pisum sativum HOM05D008517 ORTHO05D010482 1.2e-98 363.6 248 73.0
Ca_15071_v3 Cicer arietinum L. HOM05D008517 ORTHO05D010482 7.7e-98 360.9 252 71.8
Lj6g0010191 Lotus japonicus HOM05D008517 ORTHO05D010482 5.2e-86 321.6 250 63.6
Phvul.006G080100 Phaseolus vulgaris HOM05D008517 ORTHO05D010482 2.9e-68 262.7 238 54.6
VMungo0540G2173 Vigna mungo HOM05D008517 ORTHO05D010482 8.3e-68 261.2 230 56.1
Lalb_Chr15g0085691 Lupinus albus HOM05D008517 ORTHO05D010482 1.4e-67 260.4 250 52.8
Glyma.11G199600 Glycine max HOM05D008517 ORTHO05D010482 2.0e-66 256.5 247 55.1
Lalb_Chr18g0054121 Lupinus albus HOM05D008517 ORTHO05D010482 5.6e-64 248.4 237 51.5
Glyma.18G051200 Glycine max HOM05D008517 ORTHO05D010482 1.9e-59 233.4 247 53.8
arahy.Tifrunner.gnm1.ann1.Q24W9G Arachis hypogaea HOM05D008517 ORTHO05D010482 4.6e-50 202.2 227 42.7
arahy.Tifrunner.gnm1.ann1.92WL97 Arachis hypogaea HOM05D008517 ORTHO05D010482 6.6e-49 198.4 227 42.7
Prupe.6G039500 Prunus persica HOM05D016692 ORTHO05D010482 6.0e-26 122.1 239 31.4
Cpa.g.sc2.275 Carica papaya HOM05D008517 ORTHO05D010482 8.7e-25 118.2 202 30.2
FAN21G3878 Fragaria x ananassa HOM05D016692 ORTHO05D010482 1.1e-24 117.9 251 28.7
RcHm_v2.0_Chr5g0073561 Rosa chinensis HOM05D016692 ORTHO05D010482 1.1e-24 117.9 244 29.5
Eucgr.J01845 Eucalyptus grandis HOM05D008517 ORTHO05D010482 1.9e-24 117.1 193 29.5
MELO3C020481.2 Cucumis melo HOM05D008517 ORTHO05D010482 7.4e-24 115.2 235 28.1
FvH4_3g40830 Fragaria vesca HOM05D016692 ORTHO05D010482 7.4e-24 115.2 251 27.9
FAN11G0742 Fragaria x ananassa HOM05D016692 ORTHO05D010482 9.6e-24 114.8 251 28.3
MD11G1051900 Malus domestica HOM05D016692 ORTHO05D010482 1.3e-23 114.4 231 29.0
FAN25G0531 Fragaria x ananassa HOM05D000033 ORTHO05D000913 4.8e-23 112.5 251 27.9
ClCG03G000030 Citrullus lanatus HOM05D008517 ORTHO05D010482 3.1e-22 109.8 235 28.5
Dinv12288 Davidia involucrata HOM05D008517 ORTHO05D010482 2.6e-21 106.7 247 30.8
MD03G1049700 Malus domestica HOM05D016692 ORTHO05D010482 2.6e-21 106.7 185 31.9
Manes.02G211300 Manihot esculenta HOM05D008517 ORTHO05D010482 3.8e-20 102.8 169 32.5
CSS0018299 Camellia sinensis var. sinensis HOM05D008517 ORTHO05D010482 2.5e-19 100.1 248 29.4
AT2G30505 Arabidopsis thaliana HOM05D008517 ORTHO05D010482 3.2e-19 99.8 191 30.4
BcaB06g28372 Brassica carinata HOM05D008517 ORTHO05D010482 4.2e-19 99.4 258 27.5
Thhalv10016822m.g Eutrema salsugineum HOM05D008517 ORTHO05D010482 4.2e-19 99.4 193 31.6
AL4G25390 Arabidopsis lyrata HOM05D008517 ORTHO05D010482 2.7e-18 96.7 191 30.9
BcaB02g10328 Brassica carinata HOM05D008517 ORTHO05D010482 2.7e-18 96.7 193 33.2
Carub.0004s1167 Capsella rubella HOM05D008517 ORTHO05D010482 4.6e-18 95.9 190 30.5
TAR633G1539 Trochodendron aralioides HOM05D000050 ORTHO05D010482 6.0e-18 95.5 192 27.6
A05p14960 Brassica napus HOM05D008517 ORTHO05D010482 7.9e-18 95.1 193 32.6
BraA05t20422Z Brassica rapa HOM05D008517 ORTHO05D010482 7.9e-18 95.1 193 32.6
BolC4t23540H Brassica oleracea HOM05D008517 ORTHO05D010482 1.0e-17 94.7 192 32.8
CARHR123960 Cardamine hirsuta HOM05D008517 ORTHO05D010482 1.0e-17 94.7 191 30.4
Lj2A1104T76 Lonicera japonica HOM05D008517 ORTHO05D010482 1.0e-17 94.7 227 26.4
PGR119G1844 Punica granatum HOM05D008517 ORTHO05D010482 1.0e-17 94.7 188 30.3
THA.LOC104800796 Tarenaya hassleriana HOM05D008517 ORTHO05D010482 1.3e-17 94.4 196 28.6
Atru.chr10.2344 Acer truncatum HOM05D008517 ORTHO05D010482 3.0e-17 93.2 245 25.7
BcaC02g08016 Brassica carinata HOM05D008517 ORTHO05D010482 3.0e-17 93.2 210 29.0
C04p59390 Brassica napus HOM05D008517 ORTHO05D010482 3.0e-17 93.2 210 29.0
BolC4t27447H Brassica oleracea HOM05D008517 ORTHO05D010482 3.0e-17 93.2 210 29.0
BraA04t17851Z Brassica rapa HOM05D008517 ORTHO05D010482 5.1e-17 92.4 236 29.7
BcaC02g11142 Brassica carinata HOM05D008517 ORTHO05D010482 6.7e-17 92.0 192 32.3
C04p20010 Brassica napus HOM05D008517 ORTHO05D010482 6.7e-17 92.0 192 32.3
A04p23240 Brassica napus HOM05D008517 ORTHO05D010482 8.7e-17 91.7 236 29.7
Sed0007690 Sechium edule HOM05D008517 ORTHO05D010482 5.3e-14 82.4 190 29.5
Aa31LG5G6260 Aethionema arabicum HOM05D008517 ORTHO05D010482 1.0e-12 78.2 234 27.4
Rhsim13G0058200 Rhododendron simsii HOM05D008517 ORTHO05D010482 1.3e-12 77.8 187 23.5
Aa31LG1G27670 Aethionema arabicum HOM05D005178 ORTHO05D006123 3.5e-10 69.7 196 24.5
AL4G45600 Arabidopsis lyrata HOM05D005178 ORTHO05D006123 2.5e-08 63.5 193 24.4
FAN16G0804 Fragaria x ananassa HOM05D016692 ORTHO05D010482 4.3e-08 62.8 105 27.6
SEGI_30112 Sequoiadendron giganteum HOM05D000973 ORTHO05D000652 4.3e-08 62.8 173 26.6
CSS0025872 Camellia sinensis var. sinensis HOM05D002137 ORTHO05D002144 9.7e-08 61.6 138 26.8
MELO3C024389.2 Cucumis melo HOM05D002137 ORTHO05D002144 6.3e-07 58.9 215 22.8
Psat0s734g0080 Pisum sativum HOM05D002137 ORTHO05D002144 6.3e-07 58.9 163 26.4
Peaxi162Scf00038g00154 Petunia axillaris HOM05D002137 ORTHO05D002144 8.2e-07 58.5 136 29.4
Sopen10g005540 Solanum pennellii HOM05D005178 ORTHO05D006123 8.2e-07 58.5 169 24.3
Solyc10g011750.3 Solanum lycopersicum HOM05D005178 ORTHO05D006123 1.1e-06 58.2 169 24.3
AT2G46300 Arabidopsis thaliana HOM05D005178 ORTHO05D006123 1.4e-06 57.8 186 22.6
CsaV3_7G034780 Cucumis sativus L. HOM05D002137 ORTHO05D002144 2.4e-06 57.0 212 23.6
SGA_v2.0_scaffold11G05717 Striga asiatica HOM05D005178 ORTHO05D006123 2.4e-06 57.0 215 21.9
Lj7A504T56 Lonicera japonica HOM05D005178 ORTHO05D006123 4.1e-06 56.2 176 27.3
Psat5g273120 Pisum sativum HOM05D002137 ORTHO05D002144 4.1e-06 56.2 163 25.2
MSTRG.25949 Avicennia marina HOM05D002137 ORTHO05D002144 5.3e-06 55.8 200 23.0
Psat5g290120 Pisum sativum HOM05D002137 ORTHO05D002144 5.3e-06 55.8 163 25.8
CANSAT54G1933 Cannabis sativa HOM05D008517 ORTHO05D010482 9.0e-06 55.1 192 22.9


User provided reference genes

Program Settings