Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13848 Trifolium pratense HOM05D000018 ORTHO05D000453 3.7e-34 147.5 69 100.0
TPR.G13844 Trifolium pratense HOM05D000018 ORTHO05D000453 1.1e-33 146.0 68 98.5
TPR.G23003 Trifolium pratense HOM05D000018 ORTHO05D000453 1.5e-27 125.6 68 88.2
TPR.G20085 Trifolium pratense HOM05D000018 ORTHO05D000453 3.4e-27 124.4 68 86.8
TPR.G23397 Trifolium pratense HOM05D000018 ORTHO05D000453 1.3e-26 122.5 68 85.3
TPR.G27111 Trifolium pratense HOM05D000018 ORTHO05D000453 1.1e-25 119.4 68 85.3
Lj1g0018607 Lotus japonicus HOM05D000018 ORTHO05D000453 2.7e-24 114.8 68 79.4
Psat3g203600 Pisum sativum HOM05D000018 ORTHO05D000453 2.7e-24 114.8 68 77.9
Ca_06836_v3 Cicer arietinum L. HOM05D000018 ORTHO05D000453 1.7e-23 112.1 68 76.5
Lj1g0016237 Lotus japonicus HOM05D000018 ORTHO05D000453 4.3e-22 107.5 68 73.5
Glyma.18G273200 Glycine max HOM05D000018 ORTHO05D000453 8.9e-20 99.8 68 69.1
arahy.Tifrunner.gnm1.ann1.7S0877 Arachis hypogaea HOM05D000018 ORTHO05D000453 3.4e-19 97.8 66 68.2
arahy.Tifrunner.gnm1.ann1.I8IDBT Arachis hypogaea HOM05D000018 ORTHO05D000453 7.6e-19 96.7 67 65.7
TPR.G13849 Trifolium pratense HOM05D000018 ORTHO05D000453 7.6e-19 96.7 48 93.8
Glyma.19G034000 Glycine max HOM05D000018 ORTHO05D000453 4.9e-18 94.0 68 63.2
Glyma.13G052800 Glycine max HOM05D000018 ORTHO05D000453 6.4e-18 93.6 68 61.8
Phvul.008G028100 Phaseolus vulgaris HOM05D000018 ORTHO05D000453 6.4e-18 93.6 68 63.2
VMungo1383G1295 Vigna mungo HOM05D000018 ORTHO05D000453 1.1e-17 92.8 68 63.2
Ca_14393_v3 Cicer arietinum L. HOM05D000018 ORTHO05D000453 5.4e-17 90.5 69 62.3
TPR.G15929 Trifolium pratense HOM05D000018 ORTHO05D000453 2.1e-16 88.6 67 65.7
Lj2g0027597 Lotus japonicus HOM05D000018 ORTHO05D000453 3.5e-16 87.8 68 57.4
Ca_06834_v3 Cicer arietinum L. HOM05D000018 ORTHO05D000453 1.3e-15 85.9 66 60.6
Lj1g0017286 Lotus japonicus HOM05D000018 ORTHO05D000453 2.3e-15 85.1 68 54.4
Psat1g065640 Pisum sativum HOM05D000018 ORTHO05D000453 3.0e-15 84.7 69 59.4
TPR.G34420 Trifolium pratense HOM05D000018 ORTHO05D000453 3.0e-15 84.7 66 57.6
Medtr7g016090 Medicago truncatula HOM05D000018 ORTHO05D000453 3.9e-15 84.3 66 60.6
Medtr6g015950 Medicago truncatula HOM05D000018 ORTHO05D000453 5.1e-15 84.0 68 60.3
TPR.G39075 Trifolium pratense HOM05D000100 ORTHO05D000052 5.1e-15 84.0 66 57.6
VMungo1383G3637 Vigna mungo HOM05D000018 ORTHO05D000453 8.7e-15 83.2 66 57.6
Lalb_Chr17g0336831 Lupinus albus HOM05D000018 ORTHO05D000453 4.3e-14 80.9 66 54.5
Medtr7g016080 Medicago truncatula HOM05D000018 ORTHO05D000453 4.3e-14 80.9 64 60.9
arahy.Tifrunner.gnm1.ann1.J0AE6B Arachis hypogaea HOM05D000018 ORTHO05D000453 5.6e-14 80.5 67 52.2
VMungo0464G0959 Vigna mungo HOM05D000018 ORTHO05D000453 1.3e-13 79.3 67 52.2
QL09p038391 Quercus lobata HOM05D000018 ORTHO05D000453 2.1e-13 78.6 68 54.4
MD05G1199300 Malus domestica HOM05D000018 ORTHO05D000453 3.6e-13 77.8 68 52.9
Phvul.004G041800 Phaseolus vulgaris HOM05D000018 ORTHO05D000453 3.6e-13 77.8 67 52.2
Psat3g203640 Pisum sativum HOM05D000018 ORTHO05D000453 8.1e-13 76.6 66 56.1
FvH4_2g21690 Fragaria vesca HOM05D000018 ORTHO05D000453 1.4e-12 75.9 68 48.5
FAN24G0807 Fragaria x ananassa HOM05D000018 ORTHO05D000453 1.4e-12 75.9 68 48.5
FAN27G2542 Fragaria x ananassa HOM05D000018 ORTHO05D000453 1.4e-12 75.9 68 48.5
Prupe.8G225100 Prunus persica HOM05D000018 ORTHO05D000453 2.4e-12 75.1 68 50.0
Duzib138G0622 Durio zibethinus HOM05D000018 ORTHO05D000453 5.3e-12 73.9 68 50.0
Duzib133G0369 Durio zibethinus HOM05D000018 ORTHO05D000453 6.9e-12 73.6 68 50.0
RcHm_v2.0_Chr6g0288371 Rosa chinensis HOM05D000018 ORTHO05D000453 9.0e-12 73.2 68 47.1
CsaV3_7G027450 Cucumis sativus L. HOM05D000018 ORTHO05D000453 1.2e-11 72.8 68 51.5
MD10G1185400 Malus domestica HOM05D000018 ORTHO05D000453 1.2e-11 72.8 68 51.5
Thecc.01G260000 Theobroma cacao HOM05D000018 ORTHO05D000453 1.5e-11 72.4 68 48.5
CiPaw.03G262800 Carya illinoinensis HOM05D000018 ORTHO05D000453 2.6e-11 71.6 68 50.0
FAN15G0335 Fragaria x ananassa HOM05D000018 ORTHO05D000453 2.6e-11 71.6 68 45.6
MELO3C015746.2 Cucumis melo HOM05D000018 ORTHO05D000453 3.4e-11 71.2 68 51.5
Atru.chr5.1652 Acer truncatum HOM05D000018 ORTHO05D000453 7.6e-11 70.1 68 50.0
ClCG09G007690 Citrullus lanatus HOM05D000018 ORTHO05D000453 2.2e-10 68.6 68 48.5
Glyma.08G250402 Glycine max HOM05D000018 ORTHO05D000453 2.9e-10 68.2 52 55.8
vmacro02655 Vaccinium macrocarpon HOM05D000018 ORTHO05D000453 2.9e-10 68.2 68 48.5
Gohir.D11G135900 Gossypium hirsutum HOM05D000018 ORTHO05D000453 3.8e-10 67.8 68 45.6
QL09p040858 Quercus lobata HOM05D000018 ORTHO05D000453 4.9e-10 67.4 68 45.6
Sed0013877 Sechium edule HOM05D000018 ORTHO05D000453 1.1e-09 66.2 66 48.5
Gorai.007G145500 Gossypium raimondii HOM05D000018 ORTHO05D000453 1.4e-09 65.9 67 44.8
COL.COLO4_05176 Corchorus olitorius HOM05D000018 ORTHO05D000453 3.2e-09 64.7 68 45.6
QL09p040592 Quercus lobata HOM05D000018 ORTHO05D000453 5.4e-09 63.9 68 44.1
QL09p040635 Quercus lobata HOM05D000018 ORTHO05D000453 5.4e-09 63.9 68 42.6
Gohir.A11G130200 Gossypium hirsutum HOM05D000018 ORTHO05D000453 9.3e-09 63.2 68 42.6
QL09p040708 Quercus lobata HOM05D000018 ORTHO05D000453 9.3e-09 63.2 68 41.2
CiPaw.04G186000 Carya illinoinensis HOM05D000018 ORTHO05D000453 1.6e-08 62.4 69 44.9
CsaV3_7G027400 Cucumis sativus L. HOM05D000018 ORTHO05D000453 1.6e-08 62.4 69 44.9
arahy.Tifrunner.gnm1.ann1.0T426R Arachis hypogaea HOM05D000018 ORTHO05D000453 2.1e-08 62.0 71 42.3
QL09p040786 Quercus lobata HOM05D000018 ORTHO05D000453 2.1e-08 62.0 68 41.2
Ciclev10024242m.g Citrus clementina HOM05D000018 ORTHO05D000453 2.7e-08 61.6 68 44.1
Lj5g0001478 Lotus japonicus HOM05D000018 ORTHO05D000453 6.0e-08 60.5 68 44.1
QL09p040740 Quercus lobata HOM05D000018 ORTHO05D000453 7.9e-08 60.1 68 39.7
QL09p040832 Quercus lobata HOM05D000018 ORTHO05D000453 7.9e-08 60.1 68 39.7
Lsat_1_v5_gn_8_91121 Lactuca sativa HOM05D000018 ORTHO05D000453 1.0e-07 59.7 68 41.2
Solyc06g083910.3 Solanum lycopersicum HOM05D000018 ORTHO05D000453 1.0e-07 59.7 68 42.6
QL09p038383 Quercus lobata HOM05D000018 ORTHO05D000453 1.3e-07 59.3 68 42.6
QL09p040612 Quercus lobata HOM05D000018 ORTHO05D000453 1.3e-07 59.3 68 39.7
Actinidia09557 Actinidia chinensis HOM05D000018 ORTHO05D000453 1.8e-07 58.9 68 38.2
CSS0028732 Camellia sinensis var. sinensis HOM05D000018 ORTHO05D000453 3.9e-07 57.8 68 36.8
Dinv34614 Davidia involucrata HOM05D000018 ORTHO05D000453 3.9e-07 57.8 68 41.2
PGSC0003DMG400020070 Solanum tuberosum HOM05D000018 ORTHO05D000453 3.9e-07 57.8 68 41.2
TPR.G23407 Trifolium pratense HOM05D000018 ORTHO05D000453 3.9e-07 57.8 46 63.0
Duzib133G1473 Durio zibethinus HOM05D000018 ORTHO05D000453 5.1e-07 57.4 68 41.2
Gohir.A08G059900 Gossypium hirsutum HOM05D000018 ORTHO05D000453 5.1e-07 57.4 68 41.2
Gohir.D08G069100 Gossypium hirsutum HOM05D000018 ORTHO05D000453 5.1e-07 57.4 68 41.2
Gorai.004G072700 Gossypium raimondii HOM05D000018 ORTHO05D000453 5.1e-07 57.4 68 41.2
Sed0026239 Sechium edule HOM05D000018 ORTHO05D000453 5.1e-07 57.4 68 39.7
PGSC0003DMG400021180 Solanum tuberosum HOM05D000018 ORTHO05D000453 5.1e-07 57.4 67 40.3
Peaxi162Scf00134g00613 Petunia axillaris HOM05D000018 ORTHO05D000453 6.7e-07 57.0 68 41.2
Prupe.8G225800 Prunus persica HOM05D000018 ORTHO05D000453 6.7e-07 57.0 66 43.9
ClCG09G007740 Citrullus lanatus HOM05D000018 ORTHO05D000453 1.1e-06 56.2 67 41.8
Lj5g0009517 Lotus japonicus HOM05D000018 ORTHO05D000453 1.1e-06 56.2 68 41.2
Lj2A1153T48 Lonicera japonica HOM05D000018 ORTHO05D000453 1.5e-06 55.8 66 40.9
Sc24g0003120 Simmondsia chinensis HOM05D000018 ORTHO05D000453 1.5e-06 55.8 68 39.7
Sopen06g035310 Solanum pennellii HOM05D000018 ORTHO05D000453 1.5e-06 55.8 68 41.2
COL.COLO4_05177 Corchorus olitorius HOM05D000018 ORTHO05D000453 2.5e-06 55.1 68 39.7
Sed0017495 Sechium edule HOM05D000018 ORTHO05D000453 3.3e-06 54.7 70 37.1
CsaV3_7G027410 Cucumis sativus L. HOM05D000018 ORTHO05D000453 4.3e-06 54.3 69 39.1
RcHm_v2.0_Chr4g0407601 Rosa chinensis HOM05D000018 ORTHO05D000453 4.3e-06 54.3 68 36.8
FvH4_2g11330 Fragaria vesca HOM05D000018 ORTHO05D000453 5.6e-06 53.9 68 36.8
FAN24G1881 Fragaria x ananassa HOM05D000018 ORTHO05D000453 5.6e-06 53.9 68 36.8
Manes.12G031600 Manihot esculenta HOM05D000018 ORTHO05D000453 5.6e-06 53.9 68 36.8
Prupe.8G224200 Prunus persica HOM05D000018 ORTHO05D000453 5.6e-06 53.9 66 39.4
vmacro14839 Vaccinium macrocarpon HOM05D000018 ORTHO05D000453 5.6e-06 53.9 68 36.8
GSVIVG01028309001 Vitis vinifera HOM05D000018 ORTHO05D000453 5.6e-06 53.9 67 41.8
CAN.G771.24 Capsicum annuum HOM05D000018 ORTHO05D000453 7.4e-06 53.5 66 37.9
HanXRQChr10g0281031 Helianthus annuus HOM05D000018 ORTHO05D000453 7.4e-06 53.5 67 43.3


User provided reference genes

Program Settings