Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G138 Trifolium pratense HOM05D000538 ORTHO05D000614 1.9e-69 265.8 140 100.0
Psat5g127240 Pisum sativum HOM05D000538 ORTHO05D000614 1.1e-27 127.1 155 54.2
Ca_17144_v3 Cicer arietinum L. HOM05D000538 ORTHO05D000614 1.4e-19 100.1 146 48.6
Medtr3g070120 Medicago truncatula HOM05D000538 ORTHO05D000614 7.9e-15 84.3 150 44.0
Medtr2g010790 Medicago truncatula HOM05D000538 ORTHO05D000614 2.5e-13 79.3 137 39.4
CiPaw.09G080200 Carya illinoinensis HOM05D000538 ORTHO05D000614 1.1e-11 73.9 152 36.8
Haze_06686 Corylus avellana HOM05D000538 ORTHO05D000614 4.1e-11 72.0 143 36.4
Lj6g0024738 Lotus japonicus HOM05D000538 ORTHO05D000614 6.9e-11 71.2 168 31.5
TPR.G32649 Trifolium pratense HOM05D000538 ORTHO05D000614 6.9e-11 71.2 141 36.2
Ca_00207_v3 Cicer arietinum L. HOM05D000538 ORTHO05D000614 1.2e-10 70.5 142 35.9
MD05G1335900 Malus domestica HOM05D000538 ORTHO05D000614 7.6e-10 67.8 142 34.5
Cfa016408 Carpinus fangiana HOM05D000538 ORTHO05D000614 2.9e-09 65.9 154 33.1
Glyma.13G251000 Glycine max HOM05D000538 ORTHO05D000614 2.9e-09 65.9 159 33.3
TWI38G1831 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 2.9e-09 65.9 150 33.3
Ciclev10015528m.g Citrus clementina HOM05D000538 ORTHO05D000614 3.8e-09 65.5 150 31.3
MELO3C007351.2 Cucumis melo HOM05D000538 ORTHO05D000614 5.0e-09 65.1 151 35.1
TPR.G8677 Trifolium pratense HOM05D000538 ORTHO05D000614 6.5e-09 64.7 143 35.0
TPR.G40362 Trifolium pratense HOM05D000538 ORTHO05D000614 1.4e-08 63.5 135 34.8
CsaV3_6G049420 Cucumis sativus L. HOM05D000538 ORTHO05D000614 2.5e-08 62.8 148 35.8
Phvul.006G196300 Phaseolus vulgaris HOM05D000538 ORTHO05D000614 4.2e-08 62.0 160 35.0
Sed0011252 Sechium edule HOM05D000538 ORTHO05D000614 5.5e-08 61.6 146 30.8
Ca_26565_v3 Cicer arietinum L. HOM05D055061 ORTHO05D044364 9.3e-08 60.8 84 44.0
Lalb_Chr20g0122641 Lupinus albus HOM05D000538 ORTHO05D000614 9.3e-08 60.8 151 34.4
TPR.G22162 Trifolium pratense HOM05D000538 ORTHO05D000614 9.3e-08 60.8 136 31.6
CDE05G1513 Ceratophyllum demersum HOM05D000538 ORTHO05D000614 1.2e-07 60.5 145 31.7
FAN21G0633 Fragaria x ananassa HOM05D000538 ORTHO05D000614 1.2e-07 60.5 143 32.2
FAN21G1131 Fragaria x ananassa HOM05D000538 ORTHO05D000614 1.2e-07 60.5 143 32.2
QL05p077181 Quercus lobata HOM05D000538 ORTHO05D000614 1.6e-07 60.1 74 43.2
VMungo0540G1345 Vigna mungo HOM05D000538 ORTHO05D000614 1.6e-07 60.1 161 33.5
Lalb_Chr18g0048321 Lupinus albus HOM05D000538 ORTHO05D000614 3.6e-07 58.9 137 32.8
QL93p0073_1288 Quercus lobata HOM05D000538 ORTHO05D000614 3.6e-07 58.9 77 40.3
Ca_05065_v3 Cicer arietinum L. HOM05D000538 ORTHO05D000614 6.1e-07 58.2 147 32.7
MELO3C027126.2 Cucumis melo HOM05D000538 ORTHO05D000614 6.1e-07 58.2 149 33.6
Sed0014375 Sechium edule HOM05D000538 ORTHO05D000614 6.1e-07 58.2 148 32.4
TWI38G2228 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 6.1e-07 58.2 148 31.1
ClCG01G022290 Citrullus lanatus HOM05D000538 ORTHO05D000614 1.0e-06 57.4 149 33.6
Lalb_Chr16g0392201 Lupinus albus HOM05D000538 ORTHO05D000614 1.0e-06 57.4 147 32.0
Hma1.2p1_0613F.1_g189370 Hydrangea macrophylla HOM05D000538 ORTHO05D000614 1.3e-06 57.0 147 28.6
TWI39G0036 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 1.3e-06 57.0 137 35.0
RcHm_v2.0_Chr5g0004541 Rosa chinensis HOM05D000538 ORTHO05D000614 1.8e-06 56.6 154 29.2
Manes.16G016900 Manihot esculenta HOM05D000538 ORTHO05D000614 2.3e-06 56.2 139 29.5
Lj6g0011510 Lotus japonicus HOM05D000538 ORTHO05D000614 3.0e-06 55.8 67 47.8
Atru.chr1.3753 Acer truncatum HOM05D000538 ORTHO05D000614 5.1e-06 55.1 152 29.6
QL93p0107_0595 Quercus lobata HOM05D000538 ORTHO05D000614 5.1e-06 55.1 73 43.8
Glyma.05G088300 Glycine max HOM05D000538 ORTHO05D000614 8.7e-06 54.3 135 31.9
Lj2g0017985 Lotus japonicus HOM05D000538 ORTHO05D000614 8.7e-06 54.3 139 30.2
Psat6g182800 Pisum sativum HOM05D000538 ORTHO05D000614 8.7e-06 54.3 116 37.1


User provided reference genes

Program Settings