Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13676 Trifolium pratense HOM05D001453 ORTHO05D413176 4.1e-47 191.0 96 100.0
Medtr1g019990 Medicago truncatula HOM05D001453 ORTHO05D001444 9.8e-33 143.3 95 77.9
Glyma.17G244500 Glycine max HOM05D001453 ORTHO05D001444 5.6e-20 100.9 95 60.0
arahy.Tifrunner.gnm1.ann1.QUBL74 Arachis hypogaea HOM05D001453 ORTHO05D001444 8.3e-16 87.0 92 59.8
arahy.Tifrunner.gnm1.ann1.TXY6QN Arachis hypogaea HOM05D001453 ORTHO05D001444 8.3e-16 87.0 92 59.8
Glyma.14G080900 Glycine max HOM05D001453 ORTHO05D001444 8.3e-16 87.0 95 54.7
Lj1g0017798 Lotus japonicus HOM05D001453 ORTHO05D001444 4.7e-11 71.2 84 53.6
VMungo1309G0128 Vigna mungo HOM05D001453 ORTHO05D001444 2.4e-10 68.9 81 51.9
Lalb_Chr14g0368831 Lupinus albus HOM05D001453 ORTHO05D001444 3.1e-10 68.6 63 60.3
TPR.G10534 Trifolium pratense HOM05D000561 ORTHO05D000514 5.2e-10 67.8 82 50.0
Nn5g30208 Nelumbo nucifera HOM05D001453 ORTHO05D001444 2.6e-09 65.5 75 45.3
Glyma.06G037801 Glycine max HOM05D001453 ORTHO05D001444 4.4e-09 64.7 81 49.4
Lalb_Chr08g0245631 Lupinus albus HOM05D001453 ORTHO05D001444 2.2e-08 62.4 81 48.1
Glyma.04G037200 Glycine max HOM05D001453 ORTHO05D001444 2.9e-08 62.0 81 48.1
Psat5g044120 Pisum sativum HOM05D001453 ORTHO05D001444 2.9e-08 62.0 82 47.6
Lsat_1_v5_gn_4_167520 Lactuca sativa HOM05D001453 ORTHO05D001444 8.4e-08 60.5 95 40.0
Potri.014G034300 Populus trichocarpa HOM05D001453 ORTHO05D001444 1.1e-07 60.1 95 44.2
CARHR242330 Cardamine hirsuta HOM05D001453 ORTHO05D001444 1.4e-07 59.7 95 40.0
Carub.0007s0588 Capsella rubella HOM05D001453 ORTHO05D001444 2.4e-07 58.9 95 40.0
Hma1.2p1_0260F.1_g104770 Hydrangea macrophylla HOM05D001453 ORTHO05D001444 2.4e-07 58.9 95 36.8
Hma1.2p1_2391F.1_g321233 Hydrangea macrophylla HOM05D001453 ORTHO05D001444 2.4e-07 58.9 95 36.8
AT4G34420 Arabidopsis thaliana HOM05D001453 ORTHO05D001444 3.2e-07 58.5 95 40.0
MSTRG.3419 Avicennia marina HOM05D001453 ORTHO05D001444 3.2e-07 58.5 84 42.9
BcaC01g03057 Brassica carinata HOM05D001453 ORTHO05D001444 3.2e-07 58.5 83 42.2
C03p56580 Brassica napus HOM05D001453 ORTHO05D001444 3.2e-07 58.5 83 42.2
BolC3t17944H Brassica oleracea HOM05D001453 ORTHO05D001444 3.2e-07 58.5 83 42.2
Thhalv10025642m.g Eutrema salsugineum HOM05D001453 ORTHO05D001444 3.2e-07 58.5 95 40.0
Aqoxy5G01278 Aquilegia oxysepala HOM05D001453 ORTHO05D001444 4.2e-07 58.2 83 39.8
arahy.Tifrunner.gnm1.ann1.Y8IRR6 Arachis hypogaea HOM05D001453 ORTHO05D001444 4.2e-07 58.2 82 43.9
Phvul.009G063400 Phaseolus vulgaris HOM05D001453 ORTHO05D001444 4.2e-07 58.2 81 46.9
Sabra14G0024300 Salix brachista HOM05D001453 ORTHO05D001444 5.4e-07 57.8 75 44.0
C01p04330 Brassica napus HOM05D001453 ORTHO05D002020 7.1e-07 57.4 95 38.9
Eucgr.I01167 Eucalyptus grandis HOM05D001453 ORTHO05D001444 7.1e-07 57.4 80 41.2
PGR142G3348 Punica granatum HOM05D001453 ORTHO05D001444 7.1e-07 57.4 82 45.1
FvH4_1g15770 Fragaria vesca HOM05D001453 ORTHO05D001444 9.3e-07 57.0 95 40.0
arahy.Tifrunner.gnm1.ann1.6VH6V6 Arachis hypogaea HOM05D001453 ORTHO05D001444 1.2e-06 56.6 82 42.7
Cpa.g.sc62.33 Carica papaya HOM05D001453 ORTHO05D001444 1.2e-06 56.6 75 45.3
Manes.18G033700 Manihot esculenta HOM05D001453 ORTHO05D001444 1.2e-06 56.6 95 41.1
Nn1g05844 Nelumbo nucifera HOM05D001453 ORTHO05D001444 1.2e-06 56.6 95 38.9
TPR.G29768 Trifolium pratense HOM05D001453 ORTHO05D000106 1.2e-06 56.6 88 44.3
Nitab4.5_0024731g0010 Nicotiana tabacum HOM05D001453 ORTHO05D001444 1.6e-06 56.2 75 45.3
TAR625G0372 Trochodendron aralioides HOM05D001453 ORTHO05D001444 1.6e-06 56.2 83 38.6
Aa31LG8G13340 Aethionema arabicum HOM05D001453 ORTHO05D001444 2.1e-06 55.8 83 39.8
THA.LOC104807356 Tarenaya hassleriana HOM05D001453 ORTHO05D001444 2.1e-06 55.8 95 38.9
A01p04010 Brassica napus HOM05D001453 ORTHO05D002020 2.7e-06 55.5 95 37.9
BolC1t00421H Brassica oleracea HOM05D001453 ORTHO05D002020 2.7e-06 55.5 95 37.9
BraA01t00390Z Brassica rapa HOM05D001453 ORTHO05D001444 2.7e-06 55.5 95 37.9
Cfa016100 Carpinus fangiana HOM05D001453 ORTHO05D001444 2.7e-06 55.5 84 38.1
FAN19G1402 Fragaria x ananassa HOM05D001453 ORTHO05D001444 2.7e-06 55.5 95 41.1
FAN26G2081 Fragaria x ananassa HOM05D001453 ORTHO05D001444 2.7e-06 55.5 95 41.1
HanXRQChr15g0473721 Helianthus annuus HOM05D001453 ORTHO05D001444 2.7e-06 55.5 86 43.0
THA.LOC104819586 Tarenaya hassleriana HOM05D001453 ORTHO05D001444 2.7e-06 55.5 95 37.9
TAR381G1711 Trochodendron aralioides HOM05D001453 ORTHO05D001444 2.7e-06 55.5 83 38.6
Atru.chr5.2769 Acer truncatum HOM05D001453 ORTHO05D001444 3.5e-06 55.1 75 41.3
MSTRG.2892 Avicennia marina HOM05D001453 ORTHO05D001444 3.5e-06 55.1 96 38.5
BcaB08g34609 Brassica carinata HOM05D001453 ORTHO05D001444 3.5e-06 55.1 83 38.6
Hma1.2p1_2391F.1_g321236 Hydrangea macrophylla HOM05D001453 ORTHO05D001444 3.5e-06 55.1 83 36.1
AL3G47480 Arabidopsis lyrata HOM05D001453 ORTHO05D001444 4.6e-06 54.7 83 39.8
AL7G16810 Arabidopsis lyrata HOM05D001453 ORTHO05D001444 4.6e-06 54.7 95 38.9
Cfa004001 Carpinus fangiana HOM05D001453 ORTHO05D001444 4.6e-06 54.7 75 40.0
Dinv39870 Davidia involucrata HOM05D001453 ORTHO05D001444 4.6e-06 54.7 95 37.9
Lsat_1_v5_gn_3_91300 Lactuca sativa HOM05D001453 ORTHO05D001444 4.6e-06 54.7 90 42.2
CiPaw.05G053700 Carya illinoinensis HOM05D001453 ORTHO05D001444 6.0e-06 54.3 84 38.1
RcHm_v2.0_Chr6g0307191 Rosa chinensis HOM05D001453 ORTHO05D001444 6.0e-06 54.3 97 36.1
A03p45580 Brassica napus HOM05D001453 ORTHO05D001444 7.8e-06 53.9 83 39.8
BraA03t13691Z Brassica rapa HOM05D001453 ORTHO05D001444 7.8e-06 53.9 83 39.8
CSS0009979 Camellia sinensis var. sinensis HOM05D001453 ORTHO05D001444 7.8e-06 53.9 83 39.8
CSS0016039 Camellia sinensis var. sinensis HOM05D001453 ORTHO05D001444 7.8e-06 53.9 83 39.8
CSS0025015 Camellia sinensis var. sinensis HOM05D001453 ORTHO05D001444 7.8e-06 53.9 83 39.8
CSS0050343 Camellia sinensis var. sinensis HOM05D001453 ORTHO05D001444 7.8e-06 53.9 83 39.8
Carub.0003s2957 Capsella rubella HOM05D001453 ORTHO05D001444 7.8e-06 53.9 83 38.6
Haze_01862 Corylus avellana HOM05D001453 ORTHO05D001444 7.8e-06 53.9 78 39.7


User provided reference genes

Program Settings