Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13633 Trifolium pratense HOM05D000176 ORTHO05D000106 2.4e-110 402.1 196 100.0
TPR.G1754 Trifolium pratense HOM05D012393 ORTHO05D014595 4.2e-30 135.6 201 42.8
TPR.G29952 Trifolium pratense HOM05D000176 ORTHO05D000106 4.5e-16 89.0 209 33.5
TPR.G6871 Trifolium pratense HOM05D000176 ORTHO05D000106 8.5e-15 84.7 98 44.9
TPR.G36336 Trifolium pratense HOM05D000176 ORTHO05D000106 4.2e-14 82.4 172 37.2
TPR.G17996 Trifolium pratense HOM05D000176 ORTHO05D001565 1.6e-13 80.5 139 38.1
TPR.G24414 Trifolium pratense HOM05D000176 ORTHO05D000106 7.9e-13 78.2 118 37.3
TPR.G11388 Trifolium pratense HOM05D000176 ORTHO05D000106 1.0e-12 77.8 135 32.6
TPR.G25157 Trifolium pratense HOM05D022226 ORTHO05D000106 3.9e-12 75.9 177 31.6
TPR.G39416 Trifolium pratense HOM05D000176 ORTHO05D001565 1.1e-11 74.3 88 43.2
TPR.G28073 Trifolium pratense HOM05D000176 ORTHO05D000106 2.0e-11 73.6 129 31.0
Ca_04467_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.3e-11 72.8 141 29.8
VMungo1309G0077 Vigna mungo HOM05D000176 ORTHO05D000106 2.2e-10 70.1 136 36.0
TPR.G29768 Trifolium pratense HOM05D001453 ORTHO05D000106 3.7e-10 69.3 89 38.2
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 4.8e-10 68.9 115 35.7
Ca_07671_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 8.2e-10 68.2 124 36.3
Lj4A278T50 Lonicera japonica HOM05D000176 ORTHO05D000106 8.2e-10 68.2 115 34.8
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-09 67.4 159 32.1
Lj1C694T2 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-09 66.6 115 33.9
Lj7A25T29 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-09 66.6 115 34.8
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-09 66.6 115 34.8
Lju2000C0T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-09 66.6 142 33.1
Ca_13021_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.1e-09 66.2 199 29.6
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 3.1e-09 66.2 141 29.8
VMungo0647G2344 Vigna mungo HOM05D000176 ORTHO05D000106 4.1e-09 65.9 203 29.6
Ca_11112_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.3e-09 65.5 126 31.7
Lj5A149T46 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-09 65.5 138 34.1
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 6.9e-09 65.1 115 33.9
Ca_08864_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 9.1e-09 64.7 121 35.5
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-08 64.3 140 32.1
Ca_03093_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.5e-08 63.9 191 30.4
Lj4C456T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-08 63.9 115 33.9
Lj4P388T15 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-08 63.9 115 33.9
CSS0001401 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 2.6e-08 63.2 161 33.5
Ca_02311_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.6e-08 63.2 140 33.6
Ca_19142_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.6e-08 63.2 129 32.6
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.6e-08 63.2 189 28.0
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 3.4e-08 62.8 161 32.9
Ca_07984_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.4e-08 62.8 120 30.8
Ca_14675_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.4e-08 62.8 147 32.0
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-08 62.8 143 30.8
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-08 62.8 97 40.2
CSS0048564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 5.9e-08 62.0 161 33.5
Lj2C1012T4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.9e-08 62.0 115 36.5
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 5.9e-08 62.0 140 31.4
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.7e-08 61.6 161 33.5
Ca_07670_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 7.7e-08 61.6 139 32.4
Ca_13087_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.7e-08 61.6 124 32.3
Ca_13126_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 7.7e-08 61.6 139 32.4
Ca_20151_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.7e-08 61.6 139 32.4
Lj9A412T42 Lonicera japonica HOM05D000176 ORTHO05D000106 7.7e-08 61.6 138 31.2
Hma1.2p1_0622F.1_g190860 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.0e-07 61.2 137 32.8
Lj4C751G10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-07 61.2 93 36.6
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.3e-07 60.8 161 32.3
Ca_05315_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.3e-07 60.8 132 31.1
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-07 60.8 115 33.0
Lj4C241T6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-07 60.8 201 31.3
Lj4C435T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-07 60.8 103 35.9
Ca_12569_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.7e-07 60.5 150 32.0
TPR.G38578 Trifolium pratense HOM05D022226 ORTHO05D001565 1.7e-07 60.5 50 54.0
Ca_13474_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.2e-07 60.1 124 31.5
Hma1.2p1_0353F.1_g133150 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.2e-07 60.1 119 31.1
Ca_16224_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 2.9e-07 59.7 124 33.9
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-07 59.7 121 29.8
Lj8C619G11 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-07 59.7 115 31.3
Ca_19917_v3 Cicer arietinum L. HOM05D000012 ORTHO05D001060 3.8e-07 59.3 145 28.3
Ca_25328_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.8e-07 59.3 129 33.3
Ca_02550_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.0e-07 58.9 139 31.7
Migut.J01216 Erythranthe guttata HOM05D000176 ORTHO05D000106 6.5e-07 58.5 54 50.0
Lj1A1194T87 Lonicera japonica HOM05D000176 ORTHO05D000106 8.5e-07 58.2 145 31.7
Ca_26998_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.1e-06 57.8 129 31.0
Ca_14010_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 1.4e-06 57.4 139 30.9
Ca_18100_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 1.4e-06 57.4 148 31.1
Lj6C257G2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-06 57.4 138 32.6
Ca_13267_v3 Cicer arietinum L. HOM05D002198 ORTHO05D002183 1.9e-06 57.0 139 30.9
Lj1P174T10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-06 57.0 114 33.3
Lj2C590G2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-06 57.0 114 30.7
Lj5C479G2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-06 57.0 114 29.8
Lj6C647G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-06 57.0 81 40.7
RcHm_v2.0_Chr5g0052481 Rosa chinensis HOM05D000176 ORTHO05D000106 2.5e-06 56.6 110 35.5
Ca_05966_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 3.2e-06 56.2 124 30.6
FvH4_3g28611 Fragaria vesca HOM05D000176 ORTHO05D000106 3.2e-06 56.2 110 36.4
EL10Ac1g01374 Beta vulgaris HOM05D000176 ORTHO05D000106 4.2e-06 55.8 137 33.6
Ca_07112_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 5.5e-06 55.5 148 29.7
FvH4_6g33711 Fragaria vesca HOM05D000176 ORTHO05D000106 5.5e-06 55.5 112 32.1
EL10Ac3g06558 Beta vulgaris HOM05D000176 ORTHO05D000106 7.2e-06 55.1 148 31.8
EL10Ac4g08651 Beta vulgaris HOM05D000176 ORTHO05D000106 7.2e-06 55.1 148 31.8
Ca_05967_v3 Cicer arietinum L. HOM05D000176 ORTHO05D002183 7.2e-06 55.1 132 30.3
EL10Ac1g01382 Beta vulgaris HOM05D000176 ORTHO05D000106 9.4e-06 54.7 63 42.9
EL10Ac8g19817 Beta vulgaris HOM05D000176 ORTHO05D000106 9.4e-06 54.7 179 26.8
EL10Ac9g21153 Beta vulgaris HOM05D000176 ORTHO05D000106 9.4e-06 54.7 152 32.2


User provided reference genes

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