Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13580 Trifolium pratense HOM05D001643 ORTHO05D413205 1.4e-47 192.6 93 100.0
TPR.G29170 Trifolium pratense HOM05D001643 ORTHO05D001580 5.4e-12 74.3 39 92.3
Medtr5g034580 Medicago truncatula HOM05D001643 ORTHO05D001580 4.6e-11 71.2 38 89.5
Medtr5g040690 Medicago truncatula HOM05D001643 ORTHO05D001580 4.6e-11 71.2 38 92.1
Medtr5g034660 Medicago truncatula HOM05D001643 ORTHO05D001580 1.0e-10 70.1 39 84.6
Ca_10109_v3 Cicer arietinum L. HOM05D001643 ORTHO05D001580 1.7e-10 69.3 39 84.6
Phvul.007G180300 Phaseolus vulgaris HOM05D001643 ORTHO05D001580 5.1e-10 67.8 38 84.2
TPR.G13953 Trifolium pratense HOM05D001643 ORTHO05D001580 5.1e-10 67.8 39 84.6
Glyma.10G154700 Glycine max HOM05D001643 ORTHO05D001580 8.7e-10 67.0 38 86.8
VMungo0720G1701 Vigna mungo HOM05D001643 ORTHO05D001580 8.7e-10 67.0 38 86.8
arahy.Tifrunner.gnm1.ann1.58XGVW Arachis hypogaea HOM05D001643 ORTHO05D001580 1.1e-09 66.6 38 86.8
arahy.Tifrunner.gnm1.ann1.MX1CYR Arachis hypogaea HOM05D001643 ORTHO05D001580 1.1e-09 66.6 38 86.8
TPR.G38746 Trifolium pratense HOM05D001643 ORTHO05D001580 1.1e-09 66.6 39 79.5
Psat6g151080 Pisum sativum HOM05D001643 ORTHO05D001580 1.5e-09 66.2 39 79.5
Glyma.20G233700 Glycine max HOM05D001643 ORTHO05D001580 1.9e-09 65.9 38 84.2
TPR.G29169 Trifolium pratense HOM05D000121 ORTHO05D000102 1.9e-09 65.9 38 84.2
TPR.G21998 Trifolium pratense HOM05D001643 ORTHO05D001580 3.3e-09 65.1 38 81.6
TPR.G6080 Trifolium pratense HOM05D001643 ORTHO05D001580 4.3e-09 64.7 39 76.9
Lalb_Chr02g0148271 Lupinus albus HOM05D001643 ORTHO05D001580 5.6e-09 64.3 38 81.6
TPR.G7241 Trifolium pratense HOM05D001643 ORTHO05D001580 7.3e-09 63.9 38 78.9
Lalb_Chr21g0310701 Lupinus albus HOM05D001643 ORTHO05D001580 1.3e-08 63.2 38 81.6
Medtr1g082870 Medicago truncatula HOM05D001643 ORTHO05D001580 2.1e-08 62.4 47 66.0
Lj5g0001858 Lotus japonicus HOM05D001643 ORTHO05D001580 2.8e-08 62.0 47 61.7
Medtr4g129310 Medicago truncatula HOM05D001643 ORTHO05D001580 6.2e-08 60.8 37 78.4
Medtr4g129890 Medicago truncatula HOM05D001643 ORTHO05D001580 4.0e-07 58.2 36 80.6
TPR.G15795 Trifolium pratense HOM05D001643 ORTHO05D001580 5.3e-07 57.8 37 73.0
Atru.chr2.415 Acer truncatum HOM05D001643 ORTHO05D001580 1.5e-06 56.2 36 77.8
Potri.005G209000 Populus trichocarpa HOM05D001643 ORTHO05D001580 1.5e-06 56.2 45 64.4
ClCG02G015860 Citrullus lanatus HOM05D001643 ORTHO05D001580 2.6e-06 55.5 65 52.3
TAR365G0811 Trochodendron aralioides HOM05D001643 ORTHO05D001580 2.6e-06 55.5 35 80.0
Potri.005G033700 Populus trichocarpa HOM05D001643 ORTHO05D001580 3.4e-06 55.1 35 80.0
Sabra05G0035800 Salix brachista HOM05D001643 ORTHO05D001580 3.4e-06 55.1 35 80.0
Cfa007634 Carpinus fangiana HOM05D004665 ORTHO05D006264 5.8e-06 54.3 38 65.8
RcHm_v2.0_Chr3g0454681 Rosa chinensis HOM05D001643 ORTHO05D001580 5.8e-06 54.3 35 74.3
SalBow4G2637 Salvia bowleyana HOM05D001643 ORTHO05D001580 5.8e-06 54.3 43 60.5
Duzib177G1027 Durio zibethinus HOM05D001643 ORTHO05D001580 7.6e-06 53.9 35 77.1
FvH4_6g05770 Fragaria vesca HOM05D001643 ORTHO05D001580 7.6e-06 53.9 35 68.6
FAN05G3457 Fragaria x ananassa HOM05D001643 ORTHO05D001580 7.6e-06 53.9 35 68.6
FAN09G2261 Fragaria x ananassa HOM05D001643 ORTHO05D001580 7.6e-06 53.9 35 68.6
FAN14G3749 Fragaria x ananassa HOM05D001643 ORTHO05D001580 7.6e-06 53.9 35 68.6
Manes.09G166600 Manihot esculenta HOM05D001643 ORTHO05D001580 7.6e-06 53.9 35 74.3
SEGI_38655 Sequoiadendron giganteum HOM05D001643 ORTHO05D001580 7.6e-06 53.9 36 72.2
CiPaw.07G017200 Carya illinoinensis HOM05D001643 ORTHO05D001580 9.9e-06 53.5 34 79.4
Eucgr.B01990 Eucalyptus grandis HOM05D001643 ORTHO05D001580 9.9e-06 53.5 35 74.3
Hma1.2p1_0617F.1_g190260 Hydrangea macrophylla HOM05D001643 ORTHO05D001580 9.9e-06 53.5 35 77.1
Manes.08G121200 Manihot esculenta HOM05D001643 ORTHO05D001580 9.9e-06 53.5 35 77.1
Medtr5g034140 Medicago truncatula HOM05D001643 ORTHO05D001580 9.9e-06 53.5 32 81.2
PSO210G2302 Papaver somniferum HOM05D001643 ORTHO05D001580 9.9e-06 53.5 36 66.7
PSO210G4986 Papaver somniferum HOM05D001643 ORTHO05D001580 9.9e-06 53.5 36 66.7
PSO832G1451 Papaver somniferum HOM05D001643 ORTHO05D001580 9.9e-06 53.5 36 66.7
Prupe.6G326600 Prunus persica HOM05D001643 ORTHO05D001580 9.9e-06 53.5 35 74.3


User provided reference genes

Program Settings