Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13535 Trifolium pratense HOM05D009830 ORTHO05D011381 6.7e-34 146.7 72 100.0
Medtr3g080060 Medicago truncatula HOM05D009830 ORTHO05D011381 2.8e-24 114.8 72 83.3
Glyma.14G046400 Glycine max HOM05D009830 ORTHO05D011381 6.3e-16 87.0 74 68.9
Glyma.02G270600 Glycine max HOM05D009830 ORTHO05D011381 1.8e-15 85.5 74 67.6
Lalb_Chr10g0105701 Lupinus albus HOM05D009830 ORTHO05D011381 2.4e-15 85.1 73 67.1
Lalb_Chr04g0249881 Lupinus albus HOM05D009830 ORTHO05D011381 4.1e-15 84.3 74 63.5
Phvul.006G006600 Phaseolus vulgaris HOM05D009830 ORTHO05D011381 1.2e-14 82.8 77 66.2
Medtr5g085990 Medicago truncatula HOM05D009830 ORTHO05D011381 1.5e-14 82.4 75 65.3
Phvul.008G211300 Phaseolus vulgaris HOM05D009830 ORTHO05D011381 7.7e-14 80.1 75 65.3
TPR.G14443 Trifolium pratense HOM05D009830 ORTHO05D011381 1.9e-12 75.5 74 60.8
Potri.014G156600 Populus trichocarpa HOM05D009830 ORTHO05D011381 6.1e-11 70.5 76 57.9
CSS0039796 Camellia sinensis var. sinensis HOM05D009830 ORTHO05D011381 9.7e-09 63.2 72 52.8
Sabra02G0173100 Salix brachista HOM05D009830 ORTHO05D011381 2.8e-08 61.6 75 50.7
Prupe.3G212800 Prunus persica HOM05D009830 ORTHO05D011381 6.3e-08 60.5 76 55.3
arahy.Tifrunner.gnm1.ann1.2NCV7Z Arachis hypogaea HOM05D009830 ORTHO05D011381 1.1e-07 59.7 67 56.7
CSS0034930 Camellia sinensis var. sinensis HOM05D009830 ORTHO05D011381 1.8e-07 58.9 74 47.3
Cfa014334 Carpinus fangiana HOM05D009830 ORTHO05D011381 2.4e-07 58.5 76 51.3
arahy.Tifrunner.gnm1.ann1.6Q0Z4R Arachis hypogaea HOM05D000254 ORTHO05D000165 5.3e-07 57.4 70 54.3
Nn1g07260 Nelumbo nucifera HOM05D009830 ORTHO05D011381 5.3e-07 57.4 78 42.3
CSS0039346 Camellia sinensis var. sinensis HOM05D009830 ORTHO05D011381 9.1e-07 56.6 74 45.9
Haze_12789 Corylus avellana HOM05D009830 ORTHO05D011381 1.5e-06 55.8 76 50.0
CiPaw.03G157300 Carya illinoinensis HOM05D009830 ORTHO05D011381 3.4e-06 54.7 75 50.7


User provided reference genes

Program Settings