Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13486 Trifolium pratense HOM05D000009 ORTHO05D003343 2.0e-43 178.7 89 100.0
TPR.G22615 Trifolium pratense HOM05D000009 ORTHO05D003343 1.6e-16 89.4 50 84.0
TPR.G4398 Trifolium pratense HOM05D000009 ORTHO05D000008 1.2e-13 79.7 50 74.0
Medtr5g034770 Medicago truncatula HOM05D000009 ORTHO05D000008 5.7e-11 70.9 43 81.4
TPR.G13507 Trifolium pratense HOM05D000009 ORTHO05D000008 1.4e-09 66.2 49 61.2
Medtr5g035480 Medicago truncatula HOM05D000009 ORTHO05D000008 1.8e-09 65.9 43 74.4
Medtr5g035530 Medicago truncatula HOM05D000009 ORTHO05D000008 3.1e-09 65.1 40 75.0
TPR.G13496 Trifolium pratense HOM05D000009 ORTHO05D000008 4.1e-09 64.7 43 74.4
Medtr5g035280 Medicago truncatula HOM05D000009 ORTHO05D000008 7.0e-09 63.9 43 72.1
Medtr5g035300 Medicago truncatula HOM05D000009 ORTHO05D000008 7.0e-09 63.9 43 69.8
Medtr5g035240 Medicago truncatula HOM05D000009 ORTHO05D000008 9.2e-09 63.5 41 65.9
Medtr5g037450 Medicago truncatula HOM05D000009 ORTHO05D000008 9.2e-09 63.5 50 56.0
Glyma.01G065800 Glycine max HOM05D000009 ORTHO05D000008 2.0e-08 62.4 44 68.2
Lj2g0013050 Lotus japonicus HOM05D000009 ORTHO05D000008 2.0e-08 62.4 44 68.2
Medtr5g035230 Medicago truncatula HOM05D000009 ORTHO05D000008 2.0e-08 62.4 49 61.2
TPR.G4375 Trifolium pratense HOM05D000009 ORTHO05D000008 2.0e-08 62.4 43 67.4
Medtr5g037460 Medicago truncatula HOM05D000009 ORTHO05D000008 2.7e-08 62.0 41 73.2
Medtr5g037500 Medicago truncatula HOM05D000009 ORTHO05D000008 3.5e-08 61.6 44 65.9
Ca_04629_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 4.5e-08 61.2 46 56.5
TPR.G23170 Trifolium pratense HOM05D000009 ORTHO05D000008 5.9e-08 60.8 42 61.9
TPR.G23172 Trifolium pratense HOM05D000009 ORTHO05D000008 5.9e-08 60.8 42 61.9
TPR.G13493 Trifolium pratense HOM05D000009 ORTHO05D000008 7.8e-08 60.5 49 55.1
Psat2g110840 Pisum sativum HOM05D000009 ORTHO05D000008 1.0e-07 60.1 39 66.7
VMungo0720G0044 Vigna mungo HOM05D000009 ORTHO05D000008 1.0e-07 60.1 45 62.2
Glyma.09G020700 Glycine max HOM05D000009 ORTHO05D000008 1.3e-07 59.7 44 63.6
Medtr5g037490 Medicago truncatula HOM05D000009 ORTHO05D003343 1.3e-07 59.7 39 64.1
Medtr5g040770 Medicago truncatula HOM05D000009 ORTHO05D000008 1.3e-07 59.7 41 70.7
Glyma.01G035800 Glycine max HOM05D000009 ORTHO05D000008 1.7e-07 59.3 44 59.1
Ca_04628_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 2.3e-07 58.9 43 67.4
TPR.G4409 Trifolium pratense HOM05D000009 ORTHO05D000008 2.3e-07 58.9 50 56.0
Glyma.15G126900 Glycine max HOM05D000009 ORTHO05D000008 2.9e-07 58.5 44 63.6
Medtr4g051688 Medicago truncatula HOM05D000005 ORTHO05D000012 2.9e-07 58.5 40 67.5
Glyma.09G020500 Glycine max HOM05D000009 ORTHO05D000008 3.9e-07 58.2 44 61.4
Glyma.01G035400 Glycine max HOM05D000009 ORTHO05D000008 5.0e-07 57.8 45 64.4
TPR.G39213 Trifolium pratense HOM05D000009 ORTHO05D000008 5.0e-07 57.8 43 60.5
Psat2g111600 Pisum sativum HOM05D000009 ORTHO05D016330 8.6e-07 57.0 35 68.6
Glyma.12G124700 Glycine max HOM05D000009 ORTHO05D000008 1.1e-06 56.6 39 56.4
Psat2g111840 Pisum sativum HOM05D000009 ORTHO05D000008 1.1e-06 56.6 51 58.8
Aqoxy5G00357 Aquilegia oxysepala HOM05D000009 ORTHO05D000008 1.5e-06 56.2 45 57.8
Medtr3g026660 Medicago truncatula HOM05D000009 ORTHO05D000008 1.9e-06 55.8 50 50.0
Glyma.02G030700 Glycine max HOM05D000009 ORTHO05D000008 2.5e-06 55.5 45 62.2
Phvul.002G075000 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 3.3e-06 55.1 37 64.9
Glyma.15G186800 Glycine max HOM05D000009 ORTHO05D000008 4.3e-06 54.7 39 59.0
Medtr5g035510 Medicago truncatula HOM05D000009 ORTHO05D003343 4.3e-06 54.7 42 59.5
Glyma.02G026200 Glycine max HOM05D000009 ORTHO05D000008 5.6e-06 54.3 43 55.8
Glyma.02G030000 Glycine max HOM05D000009 ORTHO05D000008 5.6e-06 54.3 41 63.4
TPR.G13508 Trifolium pratense HOM05D000009 ORTHO05D000008 5.6e-06 54.3 43 62.8
Psat2g111800 Pisum sativum HOM05D000009 ORTHO05D000008 7.3e-06 53.9 36 66.7
Psat2g111960 Pisum sativum HOM05D000009 ORTHO05D000008 7.3e-06 53.9 36 66.7
Cc08_g04140 Coffea canephora HOM05D000009 ORTHO05D000008 9.5e-06 53.5 44 54.5


User provided reference genes

Program Settings