Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 6.5e-82 307.4 158 100.0
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 3.7e-61 238.4 131 90.1
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 2.0e-59 232.6 131 87.0
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 8.0e-56 220.7 131 84.0
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 5.9e-51 204.5 126 79.4
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 1.7e-50 203.0 126 77.8
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 1.7e-50 203.0 129 76.0
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 8.0e-48 194.1 124 78.2
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 1.4e-47 193.4 123 74.8
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 4.0e-47 191.8 122 74.6
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 1.2e-46 190.3 124 71.0
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 1.2e-46 190.3 124 71.0
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 1.7e-45 186.4 123 72.4
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 1.7e-45 186.4 122 74.6
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 2.2e-45 186.0 125 72.8
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 2.8e-45 185.7 118 75.4
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 4.8e-45 184.9 118 75.4
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 6.3e-45 184.5 123 74.0
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 6.3e-45 184.5 118 76.3
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 1.4e-44 183.3 125 70.4
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 2.4e-44 182.6 120 75.8
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 4.1e-44 181.8 131 69.5
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 4.1e-44 181.8 120 73.3
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 7.0e-44 181.0 123 72.4
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 7.0e-44 181.0 123 72.4
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 7.0e-44 181.0 123 71.5
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 9.1e-44 180.6 120 75.0
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 1.2e-43 180.3 121 74.4
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 1.6e-43 179.9 125 72.0
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 1.6e-43 179.9 125 72.0
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 2.0e-43 179.5 124 72.6
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 2.7e-43 179.1 123 70.7
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 2.7e-43 179.1 125 68.8
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 5.9e-43 177.9 123 69.1
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.0e-42 177.2 123 70.7
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 2.2e-42 176.0 123 72.4
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 2.2e-42 176.0 110 76.4
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 2.9e-42 175.6 118 73.7
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 3.8e-42 175.3 122 68.9
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 5.0e-42 174.9 119 68.9
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 5.0e-42 174.9 118 72.9
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 5.0e-42 174.9 118 74.6
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 6.5e-42 174.5 122 68.9
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 8.5e-42 174.1 125 70.4
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 8.5e-42 174.1 125 69.6
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 1.1e-41 173.7 125 69.6
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 1.1e-41 173.7 125 69.6
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 1.1e-41 173.7 125 69.6
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 1.5e-41 173.3 125 69.6
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 1.5e-41 173.3 153 61.4
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 1.9e-41 172.9 151 61.6
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 1.9e-41 172.9 125 68.0
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 1.9e-41 172.9 123 70.7
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 2.5e-41 172.6 118 70.3
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 2.5e-41 172.6 118 70.3
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 3.2e-41 172.2 125 69.6
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 3.2e-41 172.2 125 66.4
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 4.2e-41 171.8 119 68.9
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 5.5e-41 171.4 124 68.5
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 7.2e-41 171.0 119 69.7
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 7.2e-41 171.0 125 68.8
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 7.2e-41 171.0 125 68.8
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 7.2e-41 171.0 125 68.8
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 7.2e-41 171.0 125 68.8
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 7.2e-41 171.0 125 68.0
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 7.2e-41 171.0 118 70.3
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 7.2e-41 171.0 118 70.3
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 9.5e-41 170.6 125 65.6
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 1.2e-40 170.2 123 65.9
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 1.6e-40 169.9 119 70.6
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 1.6e-40 169.9 118 72.0
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.1e-40 169.5 118 69.5
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 2.7e-40 169.1 116 69.0
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 2.7e-40 169.1 123 66.7
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 6.1e-40 167.9 121 70.2
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 1.0e-39 167.2 122 68.9
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 1.4e-39 166.8 125 68.0
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 1.4e-39 166.8 125 64.8
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 1.4e-39 166.8 119 70.6
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.8e-39 166.4 116 69.8
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 1.8e-39 166.4 124 66.1
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 2.3e-39 166.0 137 63.5
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 4.0e-39 165.2 121 66.9
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 5.2e-39 164.9 111 73.9
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.2e-38 163.7 104 75.0
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 2.0e-38 162.9 135 63.0
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 4.4e-38 161.8 105 74.3
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 4.4e-38 161.8 122 63.9
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 9.8e-38 160.6 137 59.1
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 3.7e-37 158.7 114 67.5
Zm00001eb048120 Zea mays HOM05D006084 ORTHO05D007449 4.9e-37 158.3 131 59.5
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.8e-36 156.4 105 71.4
Peaxi162Scf00129g01228 Petunia axillaris HOM05D006084 ORTHO05D007449 1.8e-36 156.4 105 71.4
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 3.1e-36 155.6 147 55.1
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 3.1e-36 155.6 114 67.5
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 2.0e-35 152.9 116 66.4
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 7.7e-35 151.0 145 54.5
EL10Ac3g07214 Beta vulgaris HOM05D006084 ORTHO05D007449 5.0e-34 148.3 112 64.3
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 5.0e-34 148.3 116 64.7
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 2.5e-33 146.0 127 55.1
Nn3g16859 Nelumbo nucifera HOM05D006084 ORTHO05D007449 3.3e-33 145.6 89 78.7
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 7.3e-33 144.4 101 67.3
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 9.5e-33 144.1 118 60.2
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 1.2e-32 143.7 217 41.0
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 1.0e-31 140.6 128 56.2
Cpa.g.c30698.2 Carica papaya HOM05D006084 ORTHO05D007449 1.4e-31 140.2 88 76.1
Ca_03224_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 1.4e-31 140.2 87 77.0
Lsat_1_v5_gn_2_91880 Lactuca sativa HOM05D006084 ORTHO05D007449 8.9e-31 137.5 123 58.5
SHI16396 Sapria himalayana HOM05D006084 ORTHO05D007449 1.5e-30 136.7 100 65.0
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 3.4e-30 135.6 130 55.4
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 1.4e-28 130.2 106 62.3
AUR62031990 Chenopodium quinoa HOM05D006084 ORTHO05D007449 3.2e-28 129.0 89 68.5
Nitab4.5_0007141g0020 Nicotiana tabacum HOM05D006084 ORTHO05D007449 2.0e-27 126.3 107 60.7
Solyc02g086780.4 Solanum lycopersicum HOM05D006084 ORTHO05D007449 3.0e-26 122.5 81 75.3
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 5.0e-26 121.7 83 67.5
DCAR_011237 Daucus carota HOM05D006084 ORTHO05D007449 4.7e-24 115.2 73 74.0
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 8.0e-24 114.4 68 76.5
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 1.2e-22 110.5 126 43.7
Nitab4.5_0006281g0070 Nicotiana tabacum HOM05D006084 ORTHO05D007449 1.5e-22 110.2 74 73.0
MELO3C033557.2 Cucumis melo HOM05D006084 ORTHO05D007449 9.2e-20 100.9 129 48.1
BraA10t44460Z Brassica rapa HOM05D006084 ORTHO05D007449 6.0e-19 98.2 89 60.7
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis HOM05D006084 ORTHO05D007449 1.7e-18 96.7 88 47.7
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 3.9e-18 95.5 119 40.3
arahy.Tifrunner.gnm1.ann1.2H702Y Arachis hypogaea HOM05D006084 ORTHO05D007449 8.6e-18 94.4 61 73.8
Os01g0339600 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 1.1e-17 94.0 70 67.1
AUR62030334 Chenopodium quinoa HOM05D006084 ORTHO05D007449 6.2e-16 88.2 67 59.7
A10p23960 Brassica napus HOM05D006084 ORTHO05D007449 3.5e-11 72.4 145 37.9
MCO07G269 Micromonas commoda HOM05D006084 ORTHO05D007449 3.0e-10 69.3 118 36.4
Dinv35076 Davidia involucrata HOM05D006084 ORTHO05D007449 2.1e-08 63.2 51 64.7
SEGI_25092 Sequoiadendron giganteum HOM05D006084 ORTHO05D007449 5.2e-07 58.5 62 45.2


User provided reference genes

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