Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 1.7e-99 365.9 173 100.0
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 1.4e-82 309.7 173 87.9
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 2.4e-82 308.9 172 86.6
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 9.9e-76 287.0 171 79.5
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 9.9e-76 287.0 175 78.3
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 1.3e-72 276.6 175 78.9
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 3.9e-72 275.0 175 78.9
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 3.9e-72 275.0 174 78.2
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 2.8e-70 268.9 174 78.2
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 3.4e-68 261.9 169 76.9
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 8.4e-67 257.3 168 77.4
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 2.4e-66 255.8 167 75.4
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 2.4e-66 255.8 162 77.8
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 3.2e-66 255.4 162 77.2
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 5.4e-66 254.6 156 78.8
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 5.4e-66 254.6 162 78.4
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 9.3e-66 253.8 169 74.6
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 9.3e-66 253.8 167 75.4
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 9.3e-66 253.8 156 78.8
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.2e-65 253.4 167 74.9
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 1.6e-65 253.1 168 75.6
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 2.1e-65 252.7 163 76.1
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 2.7e-65 252.3 170 74.7
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 3.5e-65 251.9 168 73.8
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 6.0e-65 251.1 162 77.2
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 7.9e-65 250.8 169 73.4
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 7.9e-65 250.8 167 74.9
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 7.9e-65 250.8 168 75.0
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 1.0e-64 250.4 162 77.2
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 1.0e-64 250.4 162 75.9
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 1.0e-64 250.4 158 75.9
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 1.0e-64 250.4 167 73.7
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 2.3e-64 249.2 167 73.1
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 5.1e-64 248.1 162 75.9
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 5.1e-64 248.1 167 72.5
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 6.7e-64 247.7 162 75.3
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 8.7e-64 247.3 163 76.1
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 1.5e-63 246.5 171 69.6
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 1.9e-63 246.1 167 73.1
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 1.9e-63 246.1 156 76.9
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 1.9e-63 246.1 162 75.3
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 2.5e-63 245.7 162 75.9
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 3.3e-63 245.4 156 76.3
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 3.3e-63 245.4 156 75.6
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 7.4e-63 244.2 151 78.8
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 7.4e-63 244.2 163 74.2
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 7.4e-63 244.2 167 73.1
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 9.6e-63 243.8 167 71.9
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 9.6e-63 243.8 168 71.4
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 1.3e-62 243.4 163 74.8
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 2.1e-62 242.7 165 73.9
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 2.8e-62 242.3 167 73.7
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.8e-62 242.3 156 76.3
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.8e-62 242.3 156 76.3
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 2.8e-62 242.3 163 73.6
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 2.8e-62 242.3 156 75.0
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 2.8e-62 242.3 167 71.3
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 2.8e-62 242.3 163 73.0
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 2.8e-62 242.3 168 70.8
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 3.7e-62 241.9 167 72.5
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 3.7e-62 241.9 167 72.5
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 3.7e-62 241.9 156 74.4
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 4.8e-62 241.5 167 71.9
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 8.1e-62 240.7 163 73.6
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 1.1e-61 240.4 166 74.1
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 1.4e-61 240.0 156 74.4
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 1.8e-61 239.6 156 75.0
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 2.4e-61 239.2 171 69.6
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 2.4e-61 239.2 156 74.4
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 2.4e-61 239.2 156 75.0
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 2.4e-61 239.2 167 71.9
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 3.1e-61 238.8 167 71.3
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 4.0e-61 238.4 167 73.1
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 5.3e-61 238.0 175 70.3
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 6.9e-61 237.7 167 71.9
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 6.9e-61 237.7 156 73.1
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 6.9e-61 237.7 159 73.6
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 6.9e-61 237.7 160 72.5
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 1.2e-60 236.9 155 73.5
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 1.2e-60 236.9 159 73.6
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 1.5e-60 236.5 153 74.5
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 2.0e-60 236.1 162 74.1
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 2.0e-60 236.1 166 70.5
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 2.6e-60 235.7 175 70.3
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 7.6e-60 234.2 169 69.2
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 7.6e-60 234.2 159 72.3
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 7.6e-60 234.2 168 70.8
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 1.0e-59 233.8 167 70.1
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 1.3e-59 233.4 159 72.3
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 1.7e-59 233.0 157 72.6
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 4.9e-59 231.5 143 82.5
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 4.9e-59 231.5 170 68.8
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 6.5e-59 231.1 156 72.4
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 3.2e-58 228.8 163 70.6
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 2.1e-57 226.1 171 66.7
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 3.5e-57 225.3 155 71.0
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 7.9e-57 224.2 156 70.5
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 1.8e-56 223.0 141 77.3
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 1.8e-56 223.0 141 77.3
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 1.5e-55 219.9 153 70.6
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 1.5e-55 219.9 153 70.6
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 1.9e-55 219.5 189 60.8
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 7.4e-55 217.6 155 69.7
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 1.3e-54 216.9 153 69.9
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 1.6e-54 216.5 195 57.9
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 2.8e-54 215.7 167 63.5
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 3.7e-54 215.3 167 68.3
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 8.4e-51 204.1 151 66.2
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 1.3e-48 196.8 153 64.7
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 3.0e-48 195.7 170 64.1
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 5.1e-48 194.9 177 55.9
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 1.5e-47 193.4 310 39.4
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 2.8e-46 189.1 136 70.6
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 3.7e-46 188.7 143 66.4
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 4.8e-46 188.3 152 63.2
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 2.4e-45 186.0 154 60.4
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 2.0e-44 183.0 124 69.4
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 1.7e-38 163.3 109 67.0
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 3.8e-35 152.1 155 56.8
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 6.7e-32 141.4 91 78.0
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 2.0e-28 129.8 203 41.9
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 2.6e-28 129.4 89 73.0
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.3e-24 116.3 86 73.3
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 4.5e-20 102.1 66 71.2
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 1.1e-18 97.4 56 75.0
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.9e-18 96.7 66 63.6
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 5.5e-18 95.1 65 64.6
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 1.0e-16 90.9 103 47.6
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 4.1e-13 79.0 45 73.3
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 1.6e-09 67.0 108 41.7
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 5.2e-08 62.0 46 73.9
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 1.2e-07 60.8 43 60.5


User provided reference genes

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