Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 5.9e-275 950.3 488 100.0
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 2.1e-256 888.6 497 86.3
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 1.3e-250 869.4 497 84.3
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 3.6e-248 861.3 497 82.5
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 1.3e-245 852.8 497 81.9
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 3.7e-245 851.3 497 81.7
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 4.5e-243 844.3 497 80.9
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 2.3e-242 842.0 497 80.1
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 1.1e-241 839.7 497 79.7
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 9.5e-241 836.6 497 79.9
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 4.3e-233 811.2 497 77.5
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 2.1e-232 808.9 497 77.7
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 6.2e-232 807.4 497 77.7
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 1.8e-231 805.8 498 76.9
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 2.3e-231 805.4 497 76.5
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 5.2e-231 804.3 497 76.3
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 2.6e-230 802.0 499 77.0
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 1.3e-229 799.7 513 74.3
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 2.2e-229 798.9 497 77.1
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.4e-229 797.3 497 76.7
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.4e-228 796.2 497 76.5
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 2.4e-228 795.4 497 75.1
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 5.4e-228 794.3 497 75.9
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 7.0e-228 793.9 497 75.7
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 7.0e-228 793.9 498 75.7
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 9.2e-228 793.5 498 75.3
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 1.0e-226 790.0 498 75.5
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 1.3e-226 789.6 498 75.9
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 1.3e-226 789.6 497 76.9
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 8.6e-226 786.9 497 74.6
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.9e-225 785.8 499 75.4
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 4.3e-225 784.6 497 74.8
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 4.3e-225 784.6 497 75.5
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 7.3e-225 783.9 499 75.2
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 1.2e-224 783.1 499 75.4
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.6e-224 782.7 498 75.1
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.6e-224 782.7 498 75.1
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 1.6e-224 782.7 499 74.9
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.8e-224 781.9 499 75.2
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 8.1e-224 780.4 497 74.6
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 5.2e-223 777.7 498 73.7
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 8.9e-223 776.9 498 73.9
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 2.0e-222 775.8 519 72.4
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 4.9e-221 771.2 497 74.2
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 2.1e-219 765.8 498 72.9
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 6.0e-219 764.2 497 72.4
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 6.0e-219 764.2 495 71.7
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 1.0e-218 763.5 497 72.2
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 1.3e-218 763.1 498 72.5
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 2.3e-218 762.3 497 72.0
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 2.3e-218 762.3 497 72.0
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 5.1e-218 761.1 498 71.9
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 8.6e-218 760.4 498 71.3
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 8.6e-218 760.4 497 74.0
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 8.6e-218 760.4 498 72.7
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 1.1e-217 760.0 497 72.0
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 1.1e-217 760.0 497 72.2
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 1.1e-217 760.0 497 72.2
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 1.5e-217 759.6 497 72.0
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 1.5e-217 759.6 497 74.6
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 1.5e-217 759.6 499 72.7
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 2.8e-216 755.4 498 72.7
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 4.7e-216 754.6 498 71.3
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 1.1e-215 753.4 497 71.4
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 4.0e-215 751.5 498 72.5
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 1.5e-214 749.6 499 72.3
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 1.5e-214 749.6 497 71.4
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 7.6e-214 747.3 497 72.0
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 1.3e-213 746.5 498 70.5
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 8.4e-213 743.8 496 71.2
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 1.4e-212 743.0 500 69.8
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 7.1e-212 740.7 493 71.4
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 1.2e-211 740.0 524 67.7
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 2.7e-211 738.8 498 69.9
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 1.5e-209 733.0 481 72.1
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 2.5e-209 732.3 497 71.0
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 9.3e-204 713.8 496 67.9
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 6.2e-200 701.0 497 67.2
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 8.1e-200 700.7 497 66.0
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 1.1e-199 700.3 497 67.0
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 1.0e-194 683.7 498 67.5
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 1.7e-194 682.9 496 65.5
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.4e-191 673.3 488 66.0
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 3.5e-187 658.7 536 60.4
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 6.0e-187 657.9 337 92.0
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 6.0e-187 657.9 337 92.0
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 1.6e-176 623.2 496 63.3
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 4.1e-175 618.6 393 72.8
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 2.7e-171 605.9 500 57.4
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 2.3e-170 602.8 337 83.7
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 8.2e-168 594.3 494 57.1
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.2e-166 590.5 488 56.6
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.7e-166 587.8 336 82.4
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.3e-165 587.0 338 82.2
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.9e-165 585.9 336 82.4
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 3.8e-165 585.5 488 56.8
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 1.6e-163 580.1 503 54.3
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.3e-162 576.2 338 81.4
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.1e-161 573.9 337 79.5
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 2.5e-161 572.8 338 80.2
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 6.9e-159 564.7 323 83.3
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 4.2e-156 555.4 340 77.1
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 1.3e-152 543.9 488 52.5
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.4e-151 540.4 300 84.0
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 3.6e-147 525.8 337 77.2
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 5.2e-146 521.9 297 81.8
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 5.9e-142 508.4 297 81.5
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.5e-140 503.1 328 74.1
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.5e-132 476.5 294 75.9
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 1.8e-127 460.3 277 76.5
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 7.7e-126 454.9 338 62.1
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 5.9e-118 428.7 280 72.5
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 2.1e-99 367.1 448 40.0
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 1.4e-82 311.2 466 35.8
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 5.8e-65 252.7 206 58.7
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 2.6e-49 200.7 163 58.3
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.8e-48 196.8 111 82.9
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.8e-48 196.8 111 82.9
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 8.5e-48 195.7 111 82.0
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 1.3e-40 171.8 106 76.4
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 5.4e-10 70.1 40 80.0


User provided reference genes

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