Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G13353 Trifolium pratense HOM05D003907 ORTHO05D004819 6.1e-283 976.9 511 100.0
Ca_20232_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 1.5e-265 919.1 511 93.2
Glyma.18G200800 Glycine max HOM05D003907 ORTHO05D004819 1.4e-263 912.5 511 92.6
Glyma.07G149900 Glycine max HOM05D003907 ORTHO05D004819 1.9e-263 912.1 511 92.4
Psat3g128200 Pisum sativum HOM05D003907 ORTHO05D004819 7.8e-262 906.7 511 91.8
Medtr7g068440 Medicago truncatula HOM05D003907 ORTHO05D004819 3.0e-261 904.8 511 92.4
Lj3g0019592 Lotus japonicus HOM05D003907 ORTHO05D004819 2.1e-259 898.7 511 91.2
Glyma.01G122100 Glycine max HOM05D003907 ORTHO05D004819 1.1e-258 896.3 511 92.0
Glyma.03G058100 Glycine max HOM05D003907 ORTHO05D004819 4.0e-258 894.4 511 91.8
Cfa017208 Carpinus fangiana HOM05D003907 ORTHO05D004819 8.9e-258 893.3 511 90.8
GSVIVG01033959001 Vitis vinifera HOM05D003907 ORTHO05D004819 8.9e-258 893.3 511 89.2
Ciclev10011517m.g Citrus clementina HOM05D003907 ORTHO05D004819 1.5e-257 892.5 512 90.2
TWI53G0466 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 2.0e-257 892.1 511 90.4
Prupe.6G277300 Prunus persica HOM05D003907 ORTHO05D004819 5.8e-257 890.6 511 89.6
arahy.Tifrunner.gnm1.ann1.NAY5W3 Arachis hypogaea HOM05D003907 ORTHO05D004819 7.6e-257 890.2 511 90.6
arahy.Tifrunner.gnm1.ann1.S2G015 Arachis hypogaea HOM05D003907 ORTHO05D004819 7.6e-257 890.2 511 90.6
CiPaw.09G209200 Carya illinoinensis HOM05D003907 ORTHO05D004819 3.7e-256 887.9 511 91.0
Cc06_g01360 Coffea canephora HOM05D003907 ORTHO05D004819 1.1e-255 886.3 511 89.0
CANSAT35G0110 Cannabis sativa HOM05D003907 ORTHO05D004819 3.2e-255 884.8 511 90.4
Manes.09G104800 Manihot esculenta HOM05D003907 ORTHO05D004819 4.1e-255 884.4 511 89.2
TWI74G1106 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 5.4e-255 884.0 511 89.4
Lsat_1_v5_gn_9_34621 Lactuca sativa HOM05D003907 ORTHO05D004819 1.2e-254 882.9 511 88.8
Dinv23105 Davidia involucrata HOM05D003907 ORTHO05D004819 2.7e-254 881.7 511 88.6
MSTRG.26811 Avicennia marina HOM05D003907 ORTHO05D004819 7.8e-254 880.2 511 88.3
Manes.09G105700 Manihot esculenta HOM05D003907 ORTHO05D004819 7.8e-254 880.2 511 88.8
Lalb_Chr01g0023081 Lupinus albus HOM05D003907 ORTHO05D004819 1.0e-253 879.8 512 89.5
ClCG04G006990 Citrullus lanatus HOM05D003907 ORTHO05D004819 3.0e-253 878.2 511 88.5
QL07p019755 Quercus lobata HOM05D003907 ORTHO05D004819 3.0e-253 878.2 510 89.2
Atru.chr8.2242 Acer truncatum HOM05D003907 ORTHO05D004819 3.9e-253 877.9 512 88.7
Duzib106G0096 Durio zibethinus HOM05D003907 ORTHO05D004819 6.6e-253 877.1 512 87.9
MD12G1166000 Malus domestica HOM05D003907 ORTHO05D004819 8.6e-253 876.7 511 89.0
Gohir.A09G165200 Gossypium hirsutum HOM05D003907 ORTHO05D004819 1.5e-252 875.9 512 88.5
Haze_21003 Corylus avellana HOM05D003907 ORTHO05D004819 2.5e-252 875.2 528 87.1
Lj2A75G35 Lonicera japonica HOM05D003907 ORTHO05D004819 3.3e-252 874.8 511 88.3
Gohir.D09G160800 Gossypium hirsutum HOM05D003907 ORTHO05D004819 4.3e-252 874.4 512 88.5
Potri.016G116200 Populus trichocarpa HOM05D003907 ORTHO05D004819 5.6e-252 874.0 511 88.1
Potri.006G100200 Populus trichocarpa HOM05D003907 ORTHO05D004819 7.3e-252 873.6 511 88.3
Gorai.006G182500 Gossypium raimondii HOM05D003907 ORTHO05D004819 1.2e-251 872.8 512 88.3
CAN.G5.12 Capsicum annuum HOM05D003907 ORTHO05D004819 2.8e-251 871.7 511 86.7
CsaV3_4G026280 Cucumis sativus L. HOM05D003907 ORTHO05D004819 2.8e-251 871.7 511 87.7
Oeu041306.1 Olea europaea HOM05D003907 ORTHO05D004819 2.8e-251 871.7 511 87.5
Thecc.05G016000 Theobroma cacao HOM05D003907 ORTHO05D004819 2.8e-251 871.7 512 88.3
Carub.0006s0037 Capsella rubella HOM05D003907 ORTHO05D004819 3.6e-251 871.3 511 86.9
Nitab4.5_0000335g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 3.6e-251 871.3 511 87.5
Phvul.008G104400 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 4.7e-251 870.9 511 88.6
THA.LOC104823300 Tarenaya hassleriana HOM05D003907 ORTHO05D004819 6.2e-251 870.5 511 87.5
Actinidia05367 Actinidia chinensis HOM05D003907 ORTHO05D004819 8.1e-251 870.2 513 87.5
Lalb_Chr03g0043281 Lupinus albus HOM05D003907 ORTHO05D004819 8.1e-251 870.2 512 88.1
MSTRG.10218 Avicennia marina HOM05D003907 ORTHO05D004819 1.1e-250 869.8 511 86.1
Thhalv10013023m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 1.1e-250 869.8 511 86.9
Nitab4.5_0000511g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 1.1e-250 869.8 511 87.3
AT5G01460 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 1.4e-250 869.4 511 86.9
Carub.0003s0804 Capsella rubella HOM05D003907 ORTHO05D004819 1.8e-250 869.0 511 87.1
Nn2g11497 Nelumbo nucifera HOM05D003907 ORTHO05D004819 1.8e-250 869.0 511 87.3
AL3G19930 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 2.4e-250 868.6 511 86.9
AT3G08930 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 5.2e-250 867.5 511 86.7
CARHR211830 Cardamine hirsuta HOM05D003907 ORTHO05D004819 5.2e-250 867.5 511 86.3
Sabra16G0111700 Salix brachista HOM05D003907 ORTHO05D004819 5.2e-250 867.5 511 86.9
HanXRQChr10g0299881 Helianthus annuus HOM05D003907 ORTHO05D004819 6.8e-250 867.1 511 87.1
Sed0026155 Sechium edule HOM05D003907 ORTHO05D004819 6.8e-250 867.1 511 87.1
SGA_v2.0_scaffold110G31215 Striga asiatica HOM05D003907 ORTHO05D004819 8.9e-250 866.7 511 86.3
DCAR_018702 Daucus carota HOM05D003907 ORTHO05D004819 1.5e-249 865.9 511 86.5
AL6G10610 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 2.0e-249 865.5 511 86.1
PGSC0003DMG400023084 Solanum tuberosum HOM05D003907 ORTHO05D004819 2.0e-249 865.5 511 86.3
Sopen09g001280 Solanum pennellii HOM05D003907 ORTHO05D004819 2.6e-249 865.1 511 86.5
Sp6g40750 Schrenkiella parvula HOM05D003907 ORTHO05D004819 3.4e-249 864.8 511 87.1
Solyc09g005310.3 Solanum lycopersicum HOM05D003907 ORTHO05D004819 3.4e-249 864.8 511 86.3
TAR633G0126 Trochodendron aralioides HOM05D003907 ORTHO05D004819 3.4e-249 864.8 511 86.9
TAR636G2600 Trochodendron aralioides HOM05D003907 ORTHO05D004819 3.4e-249 864.8 511 86.1
Aqoxy4G02574 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 5.8e-249 864.0 511 86.5
CARHR083260 Cardamine hirsuta HOM05D003907 ORTHO05D004819 9.9e-249 863.2 511 86.5
MD04G1152700 Malus domestica HOM05D003907 ORTHO05D004819 1.3e-248 862.8 511 87.7
CSS0040367 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 1.7e-248 862.4 512 87.3
CiPaw.10G156600 Carya illinoinensis HOM05D003907 ORTHO05D004819 3.8e-248 861.3 511 87.9
Migut.L02013 Erythranthe guttata HOM05D003907 ORTHO05D004819 1.1e-247 859.8 511 85.9
Thhalv10020541m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 1.9e-247 859.0 511 85.9
Sp3g07320 Schrenkiella parvula HOM05D003907 ORTHO05D004819 3.2e-247 858.2 511 85.9
CSS0038026 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 2.7e-246 855.1 511 85.5
Sed0027660 Sechium edule HOM05D003907 ORTHO05D004819 6.0e-246 854.0 511 85.7
FAN09G4250 Fragaria x ananassa HOM05D003907 ORTHO05D004819 7.8e-246 853.6 511 86.3
vmacro11169 Vaccinium macrocarpon HOM05D003907 ORTHO05D004819 1.3e-245 852.8 550 81.6
Migut.J00170 Erythranthe guttata HOM05D003907 ORTHO05D004819 1.7e-245 852.4 511 85.3
PGR004G0735 Punica granatum HOM05D003907 ORTHO05D004819 1.7e-245 852.4 511 86.9
BcaB04g18559 Brassica carinata HOM05D003907 ORTHO05D004819 3.9e-245 851.3 511 85.7
BolC5t34549H Brassica oleracea HOM05D003907 ORTHO05D004819 3.9e-245 851.3 511 85.5
RcHm_v2.0_Chr3g0463141 Rosa chinensis HOM05D003907 ORTHO05D004819 3.9e-245 851.3 511 85.7
C05p58960 Brassica napus HOM05D003907 ORTHO05D004819 5.1e-245 850.9 511 85.5
BraSC256t45932Z Brassica rapa HOM05D003907 ORTHO05D004819 1.1e-244 849.7 511 85.3
FvH4_6g11450 Fragaria vesca HOM05D003907 ORTHO05D004819 1.5e-244 849.4 511 85.5
FAN14G1433 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.5e-244 849.4 511 85.5
FAN14G5854 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.5e-244 849.4 511 85.5
FAN02G2014 Fragaria x ananassa HOM05D003907 ORTHO05D004819 2.5e-244 848.6 511 85.9
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 2.5e-244 848.6 494 88.5
Hund14296 Selenicereus undatus HOM05D003907 ORTHO05D004819 3.6e-243 844.7 511 84.5
Aqoxy2G00900 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 4.8e-243 844.3 511 84.5
VMungo0331G1185 Vigna mungo HOM05D003907 ORTHO05D004819 1.4e-242 842.8 494 90.1
SalBow5G2920 Salvia bowleyana HOM05D003907 ORTHO05D004819 1.8e-242 842.4 511 83.8
ATR0618G011 Amborella trichopoda HOM05D003907 ORTHO05D004819 1.5e-241 839.3 511 83.8
Ah.12g058610 Amaranthus hybridus HOM05D003907 ORTHO05D004819 2.0e-241 839.0 511 84.0
PSO339G6136 Papaver somniferum HOM05D003907 ORTHO05D004819 2.6e-241 838.6 511 84.7
PSO801G0155 Papaver somniferum HOM05D003907 ORTHO05D004819 3.4e-241 838.2 511 84.3
Lj3A953T53 Lonicera japonica HOM05D003907 ORTHO05D004819 1.3e-240 836.3 523 83.0
unitig_8.g3229 Utricularia gibba HOM05D003907 ORTHO05D004819 2.2e-240 835.5 511 83.4
Eucgr.B02811 Eucalyptus grandis HOM05D003907 ORTHO05D004819 8.4e-240 833.6 494 88.1
AUR62010458 Chenopodium quinoa HOM05D003907 ORTHO05D004819 4.2e-239 831.2 511 82.6
Rhsim03G0144200 Rhododendron simsii HOM05D003907 ORTHO05D004819 7.1e-239 830.5 505 85.5
EL10Ac5g12561 Beta vulgaris HOM05D003907 ORTHO05D004819 9.3e-239 830.1 511 82.6
A03p36270 Brassica napus HOM05D003907 ORTHO05D004819 1.0e-237 826.6 511 83.6
C03p43910 Brassica napus HOM05D003907 ORTHO05D004819 1.0e-237 826.6 511 83.6
BolC3t16659H Brassica oleracea HOM05D003907 ORTHO05D004819 1.3e-237 826.2 511 83.4
BraA03t12798Z Brassica rapa HOM05D003907 ORTHO05D004819 3.0e-237 825.1 511 83.4
A05p39920 Brassica napus HOM05D003907 ORTHO05D004819 3.3e-236 821.6 492 86.0
FAN05G4390 Fragaria x ananassa HOM05D003907 ORTHO05D004819 3.6e-235 818.1 494 85.8
Aa31LG1G23090 Aethionema arabicum HOM05D003907 ORTHO05D004819 4.8e-235 817.8 494 84.8
Lalb_Chr19g0124541 Lupinus albus HOM05D003907 ORTHO05D004819 1.4e-234 816.2 512 84.4
ECA247G1720 Erigeron canadensis HOM05D003907 ORTHO05D004819 1.8e-234 815.8 488 85.2
COL.COLO4_14536 Corchorus olitorius HOM05D003907 ORTHO05D004819 2.4e-234 815.5 473 88.8
Ca_07641_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 1.2e-233 813.1 525 82.9
Ca_30080_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 1.2e-233 813.1 525 82.9
CDE05G1648 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 3.2e-231 805.1 511 80.0
Oeu064499.2 Olea europaea HOM05D003907 ORTHO05D004819 5.5e-231 804.3 548 77.4
Sabra06G0077000 Salix brachista HOM05D003907 ORTHO05D004819 5.5e-231 804.3 556 78.1
Phvul.010G001200 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 1.2e-230 803.1 511 83.6
Zm00001eb269470 Zea mays HOM05D003907 ORTHO05D004819 3.0e-229 798.5 511 79.3
CDE05G1838 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 1.8e-226 789.3 511 78.5
AUR62030453 Chenopodium quinoa HOM05D003907 ORTHO05D004819 1.3e-224 783.1 512 79.5
Zm00001eb378570 Zea mays HOM05D003907 ORTHO05D004819 4.9e-224 781.2 509 78.4
Peaxi162Scf00141g01026 Petunia axillaris HOM05D003907 ORTHO05D004819 3.2e-223 778.5 511 79.3
BcaC05g29627 Brassica carinata HOM05D003907 ORTHO05D004819 3.0e-213 745.3 438 87.0
Lj3g0026649 Lotus japonicus HOM05D003907 ORTHO05D004819 3.3e-212 741.9 414 93.5
MELO3C003291.2 Cucumis melo HOM05D003907 ORTHO05D004819 5.1e-205 718.0 473 81.8
Duzib128G0387 Durio zibethinus HOM05D003907 ORTHO05D004819 1.3e-200 703.4 512 74.0
Duzib093G1828 Durio zibethinus HOM05D003907 ORTHO05D004819 6.7e-197 691.0 504 73.2
Mapoly0058s0053 Marchantia polymorpha HOM05D003907 ORTHO05D004819 7.0e-194 681.0 514 67.3
Actinidia20733 Actinidia chinensis HOM05D003907 ORTHO05D004819 9.1e-194 680.6 511 71.8
SMO367G0485 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.3e-188 662.1 503 68.2
Cpa.g.sc11.141 Carica papaya HOM05D003907 ORTHO05D004819 1.2e-182 643.7 376 88.0
TPR.G7076 Trifolium pratense HOM05D003907 ORTHO05D004819 6.3e-179 631.3 365 91.2
Pp3c13_15020 Physcomitrium patens HOM05D003907 ORTHO05D004819 8.3e-179 630.9 514 62.1
unitig_22.g6592 Utricularia gibba HOM05D003907 ORTHO05D004819 4.5e-177 625.2 469 70.8
Sc01g0006450 Simmondsia chinensis HOM05D003907 ORTHO05D004819 4.5e-169 598.6 366 84.7
CBR_g40208 Chara braunii HOM05D003907 ORTHO05D004819 9.5e-167 590.9 511 60.9
SMO146G0061 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.2e-166 590.5 497 59.4
DCAR_015417 Daucus carota HOM05D003907 ORTHO05D004819 6.1e-166 588.2 504 64.9
HPP92_003698 Vanilla planifolia HOM05D003907 ORTHO05D004819 1.0e-165 587.4 376 79.8
CBR_g53729 Chara braunii HOM05D003907 ORTHO05D004819 8.9e-165 584.3 511 59.5
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 2.3e-157 559.7 349 83.1
Pp3c23_4110 Physcomitrium patens HOM05D003907 ORTHO05D004819 6.4e-155 551.6 499 55.1
Glyma.16G099300 Glycine max HOM05D003907 ORTHO05D004819 1.4e-154 550.4 307 94.1
Hma1.2p1_0362F.1_g136250 Hydrangea macrophylla HOM05D003907 ORTHO05D004819 1.4e-154 550.4 325 88.0
Actinidia11586 Actinidia chinensis HOM05D003907 ORTHO05D004819 2.6e-148 529.6 458 66.4
Actinidia27153 Actinidia chinensis HOM05D003907 ORTHO05D004819 7.8e-137 491.5 284 89.8
AagrBONN_evm.TU.Sc2ySwM_368.1024 Anthoceros agrestis HOM05D003907 ORTHO05D004819 2.9e-131 473.0 383 62.7
Actinidia29101 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.6e-121 440.7 255 87.5
PRCOL_00002088 Prasinoderma coloniale HOM05D003907 ORTHO05D004819 1.1e-117 427.9 513 48.0
Actinidia29102 Actinidia chinensis HOM05D003907 ORTHO05D004819 3.1e-109 399.8 245 84.9
MCO03G500 Micromonas commoda HOM05D003907 ORTHO05D004819 3.8e-107 392.9 487 44.1
SMO015G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.1e-105 387.1 386 54.1
SEGI_00285 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 1.5e-103 380.9 279 72.4
Cre01.g023400 Chlamydomonas reinhardtii HOM05D003907 ORTHO05D004819 8.2e-94 348.6 519 38.0
CSS0040994 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 8.2e-78 295.4 200 80.0
SMO173G0027 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 6.1e-73 279.3 343 46.6
TPR.G8133 Trifolium pratense HOM05D003907 ORTHO05D038338 1.3e-70 271.6 504 39.3
SEGI_07345 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 6.3e-62 242.7 142 87.3
SMO173G0021 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 6.5e-59 232.6 290 46.6
SMO023G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D376622 3.6e-57 226.9 366 41.0
ATR0759G042 Amborella trichopoda HOM05D003907 ORTHO05D038338 1.4e-48 198.4 117 82.1
SMO146G0194 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 6.4e-46 189.5 206 53.4
ATR0759G047 Amborella trichopoda HOM05D003907 ORTHO05D004819 4.3e-42 176.8 164 64.0
SMO173G0002 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 4.3e-42 176.8 197 52.3
Ca_20230_v3 Cicer arietinum L. HOM05D003907 ORTHO05D148210 2.7e-36 157.5 106 78.3
SMO146G0334 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.2e-30 137.9 119 58.0
BcaC01g04205 Brassica carinata HOM05D003907 ORTHO05D004819 2.1e-28 131.3 82 84.1
VMungo1080G1595 Vigna mungo HOM05D003907 ORTHO05D004819 3.1e-24 117.5 156 50.0
SMO173G0093 Selaginella moellendorffii HOM05D003907 ORTHO05D378519 8.7e-11 72.8 67 56.7
arahy.Tifrunner.gnm1.ann1.W1QHU6 Arachis hypogaea HOM05D003907 ORTHO05D018508 2.1e-09 68.2 90 46.7
arahy.Tifrunner.gnm1.ann1.7H636Z Arachis hypogaea HOM05D005380 ORTHO05D006601 3.6e-09 67.4 37 86.5


User provided reference genes

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